BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0282.0002.p (522 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KB85.1 B3KB85_9BACI Cellobiose phosphorylase-like protein 616 e-174 B8D1U8.1 B8D1U8_HALOH Cellobiose phosphorylase 537 e-150 C0FZB1.1 C0FZB1_9FIRM Putative uncharacterized protein 534 e-149 A9KLB4.1 A9KLB4_CLOPH Cellobiose phosphorylase-like protein 489 e-136 C4ZHQ8.1 C4ZHQ8_9FIRM Cellobiose-phosphorylase 474 e-132 >B3KB85.1 B3KB85_9BACI Cellobiose phosphorylase-like protein Length = 908 Score = 616 bits (1589), Expect = e-174, Method: Compositional matrix adjust. Identities = 307/523 (58%), Positives = 370/523 (70%), Gaps = 1/523 (0%) Query: 1 MEPGDVRSLLLNNYAGVRIDGSNATIIGQQPGEFIADRNNIPRVWMDHGAWPFLTTMLYL 60 MEP +VR LLLNNYAGVRIDGSNATIIG +PGEF+ADRNNIPRVWMDHGAWPF+TT+LY+ Sbjct: 386 MEPAEVRYLLLNNYAGVRIDGSNATIIGTKPGEFVADRNNIPRVWMDHGAWPFMTTLLYI 445 Query: 61 DRSGDLDFLLEQQSYFRDSFMARCRERDASWDASAGSTLQTADGASYTGTILEHILLQNL 120 D+SGD+DFL + Q+YFRD F+ RC+E+DA W G+ L T G Y GT+LEH+LLQNL Sbjct: 446 DQSGDMDFLKQPQTYFRDVFVKRCQEKDAGWLPEHGNQLLTVSGEVYEGTVLEHMLLQNL 505 Query: 121 VPFFNVGEHNNILLEGADWNDGLDMASQRGESVTFTSFYASNXXXXXXXXXXXKERKGXX 180 VPFFNVGEHNNI LEGADWNDGLD+A RGESV FT+FYASN ++ + Sbjct: 506 VPFFNVGEHNNIKLEGADWNDGLDLAPGRGESVAFTAFYASNLMQLGDLLLAWQDTEAVE 565 Query: 181 XXXXXXXXXXXXDSLHDAVDYESVAAKRGLLDRYYAAAPNKVSGVRSELTLDRIADDLAR 240 DS+ + YE V K LLD YY A V+G + + ++ + DL Sbjct: 566 HVEIAEEMAVLLDSVTAPISYEDVQGKLNLLDSYYEAVKASVTGNKRKFSIADVVQDLKL 625 Query: 241 KAEWLVDHLRRNEWIQGNQGDGWFNGYYNNDGERVEGEAGGNIRMTLTGQVFPLLGHXXX 300 KA+WL+ +LR NEWI +G WFNGYYNNDG RVEG+ +RMTLTGQVF ++G Sbjct: 626 KADWLIQNLRCNEWITSQEGYSWFNGYYNNDGARVEGDHPLGVRMTLTGQVFAVMGGIAD 685 Query: 301 XXXXXXXXXXVERNLYDGKIGYRLNTDFGGIQQNLGRAFGFAFGHKENGAMFSHMTVMYG 360 V+R L D IGYRLN++FG IQQNLGRAFGFAFGHKENGAMFSHM+VMY Sbjct: 686 DEQVGHITKSVDRYLKDPSIGYRLNSNFGEIQQNLGRAFGFAFGHKENGAMFSHMSVMYA 745 Query: 361 NALYKRGYVKEGRKVLDSLYSLSVNFELSRMYPGIPEYINEQGRGMYTYLTGSASWLLLT 420 NALYKRG+V+EG +VL S+Y LS +FE SRMYPGIPEYINE+GRGMY YLTGSASWLLLT Sbjct: 746 NALYKRGFVQEGYEVLRSIYDLSQDFERSRMYPGIPEYINEKGRGMYPYLTGSASWLLLT 805 Query: 421 MVTEVFGVKGKLGDLLLQPKLMKDQFDQDGKASIRTIFAERGLDVVYTAASGAEYGDYQI 480 M+TEVFGVKG G L L+PKL QFD DG A++ T FA + L +VY + +YG Y I Sbjct: 806 MLTEVFGVKGNRGHLRLEPKLRSAQFDTDGHATVTTGFAGKQLQIVYGNPNRLDYGSYAI 865 Query: 481 HSVTLNGAEVTLQRVSEG-VLIPRSVLAALPEEGFHLLQVVLA 522 SV LNG ++ L+ G V + RS+L++L L+ V LA Sbjct: 866 QSVMLNGEKIQLRSQEPGAVELDRSMLSSLSGSERILIHVELA 908 >B8D1U8.1 B8D1U8_HALOH Cellobiose phosphorylase Length = 904 Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust. Identities = 266/503 (52%), Positives = 342/503 (67%), Gaps = 9/503 (1%) Query: 1 MEPGDVRSLLLNNYAGVRIDGSNATIIGQQPGEFIADRNNIPRVWMDHGAWPFLTTMLYL 60 M+ +VR LL NN+AGVRIDGSNATIIG +PGEFIADRNNI R+W+DHGAWP TT LY+ Sbjct: 385 MDDKNVRYLLYNNFAGVRIDGSNATIIGNKPGEFIADRNNITRLWIDHGAWPLQTTSLYI 444 Query: 61 DRSGDLDFLLEQQSYFRDSFMARCRERDASWDASAGSTLQTADGASYTGTILEHILLQNL 120 + SGD+ FL+E+QSYF+D ++ RE D W G+ L+T +G Y G+ILEHILLQNL Sbjct: 445 NMSGDIKFLMEKQSYFKDRIVSFAREIDNRWHQGMGNKLKTEEGQVYHGSILEHILLQNL 504 Query: 121 VPFFNVGEHNNILLEGADWNDGLDMASQRGESVTFTSFYASNXXXXXXXXXXXKERKGXX 180 FFNVGEHNNI LE ADWNDGLDMAS++GESV FT+FYA N ++++ Sbjct: 505 TVFFNVGEHNNIRLEDADWNDGLDMASEKGESVAFTAFYAGNLFEIVNLLETLRDKENVT 564 Query: 181 XXXXXXXXXXXXDSLHDAVDYESVAAKRGLLDRYYAAAPNKVSGVRSELTLDRIADDLAR 240 D+L++ VDY V AK +L++Y+A+ +SG + + +D++ D+ R Sbjct: 565 EVKLLEEIKVLLDTLYNPVDYNDVTAKNEVLNKYFASCKYNISGNQVTIKIDQLIKDIKR 624 Query: 241 KAEWLVDHLRRNEWIQGNQGDGWFNGYYNNDGERVEGEAGGNIRMTLTGQVFPLLGHXXX 300 KA WL +HLR NE+I N+G WFNGYY+N G+RVEG RMTLTGQVF + Sbjct: 625 KANWLQEHLRENEYIGDNKGHKWFNGYYDNKGQRVEGRFEKETRMTLTGQVFTTMFGIAT 684 Query: 301 XXXXXXXXXXVERNLYDGKI-GYRLNTDFGGIQQNLGRAFGFAFGHKENGAMFSHMTVMY 359 + LYD + GYRLNTDF LGR FGFA+GHKENGAMFSHM+VMY Sbjct: 685 GEQVKNIISAADYYLYDDGVGGYRLNTDFKDKDIQLGRCFGFAYGHKENGAMFSHMSVMY 744 Query: 360 GNALYKRGYVKEGRKVLDSLYSLSVNFELSRMYPGIPEYINEQGRGMYTYLTGSASWLLL 419 NALY+R +VKEG KV S+Y+ ++F+ SR+YPGIPEYI+++GRGMY+YLTGSASWLLL Sbjct: 745 ANALYRRNFVKEGFKVWHSIYNHCLDFDRSRIYPGIPEYISQRGRGMYSYLTGSASWLLL 804 Query: 420 TMVTEVFGVKGKLGDLLLQPKLMKDQFDQDGKASIRTIFAERGLDVVYTAASGAEYGDYQ 479 T TEVFGVKG GDL L+PKL+K+QFD++GKA+I FA + L + Y +Y Y+ Sbjct: 805 TFATEVFGVKGYYGDLRLEPKLLKEQFDEEGKATIGIKFAGKRLTITYVNPQLLDYDSYK 864 Query: 480 IHSVTLN--------GAEVTLQR 494 I V +N +VT++R Sbjct: 865 IDKVMVNDEIIDYYEDKQVTIKR 887 >C0FZB1.1 C0FZB1_9FIRM Putative uncharacterized protein Length = 907 Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust. Identities = 250/523 (47%), Positives = 353/523 (67%), Gaps = 3/523 (0%) Query: 1 MEPGDVRSLLLNNYAGVRIDGSNATIIGQQPGEFIADRNNIPRVWMDHGAWPFLTTMLYL 60 M P VR +LL+N+AGVR+DGSNATIIG + GEF+ADRN+I RVWMDHG WP +TT Y+ Sbjct: 381 MNPDGVRQMLLDNFAGVRVDGSNATIIGSKQGEFVADRNHITRVWMDHGVWPMITTKFYI 440 Query: 61 DRSGDLDFLLEQQSYFRDSFMARCRERDASWDASAGSTLQTADGASYTGTILEHILLQNL 120 D++GDL+ L ++ +YF+D +AR D WD S G +T G GTILEH+LLQNL Sbjct: 441 DQTGDLELLEKEAAYFKDKQIARGTRTDTLWDESYGCWQKTKRGVREEGTILEHLLLQNL 500 Query: 121 VPFFNVGEHNNILLEGADWNDGLDMASQRGESVTFTSFYASNXXXXXXXXXXXKERKGXX 180 F+ VGEHNNI L GADWND LDMAS++GESV F++ YA N +++ G Sbjct: 501 TAFYEVGEHNNIRLRGADWNDALDMASEKGESVAFSNAYAGNLADIAELLEAYRKKTGKE 560 Query: 181 XXXXXXXXXXXXDSLHDAVDYESVAAKRGLLDRYYAAAPNKVSGVRSELTLDRIADDLAR 240 + + Y+SV K +L+ Y A + SG + E++++++ ++L Sbjct: 561 TVSLLAEIVSLLED--NPALYDSVEKKLHVLEEYLHACEHDTSGEKVEISIEKLTENLRH 618 Query: 241 KAEWLVDHLRRNEWIQGNQGDGWFNGYYNNDGERVEGEAGGNIRMTLTGQVFPLLGHXXX 300 K+EWL++H+R+NEW++ ++ GWFNGYY+N G +VEG+ +RM LTGQVFP++ Sbjct: 619 KSEWLMEHIRKNEWVKDSEESGWFNGYYDNHGRQVEGDTKTGVRMMLTGQVFPIMAGTAT 678 Query: 301 XXXXXXXXXXVERNLYDGKIG-YRLNTDFGGIQQNLGRAFGFAFGHKENGAMFSHMTVMY 359 +R LYD K+G YRLNTDFG ++ +LGR FGF++G KENGA+FSHM VMY Sbjct: 679 DEQIRQITKSADRYLYDEKVGGYRLNTDFGEVKTDLGRMFGFSYGDKENGAVFSHMAVMY 738 Query: 360 GNALYKRGYVKEGRKVLDSLYSLSVNFELSRMYPGIPEYINEQGRGMYTYLTGSASWLLL 419 NALYKRG+ KEG K L +LY S NFE+SR+YPGIPEY N +GRGMY YLTG+ASW +L Sbjct: 739 ANALYKRGFAKEGYKSLHALYRQSANFEVSRIYPGIPEYFNGRGRGMYHYLTGAASWYML 798 Query: 420 TMVTEVFGVKGKLGDLLLQPKLMKDQFDQDGKASIRTIFAERGLDVVYTAASGAEYGDYQ 479 T++TE+FGV+G++GD++L+PKL+K+QFD++ KAS+ FA++ + Y +YG+YQ Sbjct: 799 TVITEMFGVRGQVGDMILEPKLLKEQFDEEKKASLTLQFADKNWKITYLNREEKDYGEYQ 858 Query: 480 IHSVTLNGAEVTLQRVSEGVLIPRSVLAALPEEGFHLLQVVLA 522 I VT++G ++ ++P++++ L H ++VVLA Sbjct: 859 IADVTVDGEKINFVPKQHEAILPKNMIEKLSGNETHQIEVVLA 901 >A9KLB4.1 A9KLB4_CLOPH Cellobiose phosphorylase-like protein Length = 900 Score = 489 bits (1260), Expect = e-136, Method: Compositional matrix adjust. Identities = 242/523 (46%), Positives = 326/523 (62%), Gaps = 7/523 (1%) Query: 1 MEPGDVRSLLLNNYAGVRIDGSNATIIGQQPGEFIADRNNIPRVWMDHGAWPFLTTMLYL 60 M P VR +L +N++G+R+DG+NATIIG + GEFIADRNNI RVWMDHG WP LTT LY+ Sbjct: 384 MNPSGVRGMLHDNFSGIRMDGTNATIIGTKQGEFIADRNNITRVWMDHGVWPLLTTNLYI 443 Query: 61 DRSGDLDFLLEQQSYFRDSFMARCRERDASWDASAGSTLQTADGASYTGTILEHILLQNL 120 + SGD+ FLLE+ +YF+D R E+D +D G ++T G Y GTILEH+LLQNL Sbjct: 444 NHSGDIRFLLEEITYFKDMQAVRGEEKDTKYDEGLGKRVKTIQGEQYQGTILEHLLLQNL 503 Query: 121 VPFFNVGEHNNILLEGADWNDGLDMASQRGESVTFTSFYASNXXXXXXXXXXXKERKGXX 180 F++VGEHN+I L GADWND LDMA +RGESV FT+ YA N +E Sbjct: 504 TAFYDVGEHNHIRLRGADWNDALDMAKERGESVAFTAAYALNLMTLAELLEKLEEHGVTS 563 Query: 181 XXXXXXXXXXXXDSLHDAVDYESVAAKRGLLDRYYAAAPNKVSGVRSELTLDRIADDLAR 240 + D + + K+ +L Y VSG + E+ + + +L Sbjct: 564 VLLAKEMQILLTE---DITCFNDIERKKDILYTYCKQVKESVSGQKVEVFVTNLVRNLKN 620 Query: 241 KAEWLVDHLRRNEWIQGNQGDGWFNGYYNNDGERVEGEAGGNIRMTLTGQVFPLLGHXXX 300 K+EW+ DH+R EW+ +G WFNGYY+N G+RVEG+ +RM LT QVF ++ Sbjct: 621 KSEWIKDHIRNEEWLTNAEGFHWFNGYYDNHGQRVEGDFAQGVRMILTSQVFTIMSGVAT 680 Query: 301 XXXXXXXXXXVERNLYDGKI-GYRLNTDFGGIQQNLGRAFGFAFGHKENGAMFSHMTVMY 359 + LY+ K+ GYRLNTDF ++ +LGR FGFA+G KENGA+F HM +MY Sbjct: 681 KEQVKDVIRAADHYLYEEKMGGYRLNTDFNEVKLDLGRMFGFAYGQKENGAVFCHMAIMY 740 Query: 360 GNALYKRGYVKEGRKVLDSLYSLSVNFELSRMYPGIPEYINEQGRGMYTYLTGSASWLLL 419 NALY+RG++KEG V+DSL+ +F +SR+YPGIPEYI E GR +Y YLTGSASWLLL Sbjct: 741 ANALYQRGFIKEGYHVIDSLFRHCNDFSVSRIYPGIPEYIAENGRALYHYLTGSASWLLL 800 Query: 420 TMVTEVFGVKGKLGDLLLQPKLMKDQFDQDGKASIRTIFAERGLDVVYTAASGAEYGDYQ 479 T++TE+FG+KG+ GDL +PKL+ +QF QDG A + IFAE+ +V Y + E +YQ Sbjct: 801 TVLTEMFGIKGRYGDLYFEPKLLLEQFRQDGTAKVEFIFAEKSFEVTYQNSKRLEVSEYQ 860 Query: 480 IHSVTLNGAEVTLQRVSEGVLIPRSVLAALPEEGFHLLQVVLA 522 + + L+G + + I RS + L HL+ VVL Sbjct: 861 VSKIILDG---MVYESKDLRCIRRSDILKLSNNQMHLITVVLC 900 >C4ZHQ8.1 C4ZHQ8_9FIRM Cellobiose-phosphorylase Length = 900 Score = 474 bits (1220), Expect = e-132, Method: Compositional matrix adjust. Identities = 235/523 (44%), Positives = 323/523 (61%), Gaps = 6/523 (1%) Query: 1 MEPGDVRSLLLNNYAGVRIDGSNATIIGQQPGEFIADRNNIPRVWMDHGAWPFLTTMLYL 60 MEP DVR +++NNY GVRIDG+NATIIG +PGEFIADRNNI RVWMDH WPF+TT LY+ Sbjct: 381 MEPSDVRRMIVNNYGGVRIDGTNATIIGNEPGEFIADRNNITRVWMDHAFWPFVTTKLYI 440 Query: 61 DRSGDLDFLLEQQSYFRDSFMARCRERDASWDASAGSTLQTADGASYTGTILEHILLQNL 120 D++GD D L E +YF+D R D +W+ + G+ +TA G Y GT+LEHIL+QNL Sbjct: 441 DQTGDTDVLFEHTTYFKDYQSMRGTSHDEAWNTTYGNKQRTAGGQIYFGTVLEHILIQNL 500 Query: 121 VPFFNVGEHNNILLEGADWNDGLDMASQRGESVTFTSFYASNXXXXXXXXXXXKERKGXX 180 F++VGEHN + L GADWND LDMA +GESV FT YA N ++ G Sbjct: 501 CAFYDVGEHNEMKLHGADWNDALDMAWDKGESVAFTCAYAGNLLDIAKCLRNVEKISGIN 560 Query: 181 XXXXXXXXXXXXDSLHDAVDYESVAAKRGLLDRYYAAAPNKVSGVRSELTLDRIADDLAR 240 D + Y K+ LL Y A N SG + + + I ++L Sbjct: 561 RIEVLDELKLLLAD--DEILYNCHDKKQDLLMSYAKACENCTSGGTALIPIAAICENLEH 618 Query: 241 KAEWLVDHLRRNEWIQGNQGDGWFNGYYNNDGERVEGEAGGNIRMTLTGQVFPLLGHXXX 300 KAEW++ ++R NEWI GWFNGYY+N+G VE G++RM LTGQVF ++ Sbjct: 619 KAEWMMKNIRENEWISDGTDGGWFNGYYDNNGRPVERCESGDVRMMLTGQVFAIMSGTAK 678 Query: 301 XXXXXXXXXXVERNLYDGKI-GYRLNTDFGGIQQNLGRAFGFAFGHKENGAMFSHMTVMY 359 ++ L+D K GYRLNTDF + +LGR FGFA+G KENGA+FSHM VMY Sbjct: 679 KEQIKAICNSADKYLFDQKAGGYRLNTDFKEEKFDLGRMFGFAYGEKENGAVFSHMAVMY 738 Query: 360 GNALYKRGYVKEGRKVLDSLYSLSVNFELSRMYPGIPEYINEQGRGMYTYLTGSASWLLL 419 NALYK+G++KEG KVL +L +++F+ SRMYPG+PEY + GRG+Y+YLTG+ASW +L Sbjct: 739 ANALYKQGFIKEGYKVLKTLLDTAMDFDRSRMYPGVPEYFDNDGRGLYSYLTGAASWYML 798 Query: 420 TMVTEVFGVKGKLGDLLLQPKLMKDQFDQDGKASIRTIFAERGLDVVYTAASGAEYGDYQ 479 TM+T V+GV G+LGD +++P LM Q+++ G A + FA G D++ E G+ Sbjct: 799 TMITSVYGVHGELGDFVIEPALMPQQYNEKGDAKVSLEFAGHGFDILVHNPDKLEPGEAH 858 Query: 480 IHSVTLNGAEVTLQRVS-EGVLIPRSVLAALPEEGFHLLQVVL 521 + + +V ++ V+ V IP+ + L + H +++ + Sbjct: 859 VKRALCD--DVKVENVTGNSVRIPKQAIEMLSTDKCHTVEIYI 899 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,009,067,367 Number of extensions: 123670863 Number of successful extensions: 267181 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 267242 Number of HSP's successfully gapped: 12 Length of query: 522 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 382 Effective length of database: 1,741,754,103 Effective search space: 665350067346 Effective search space used: 665350067346 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)