BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0281.0003.p (657 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q03658.1 Q03658_9BACT Precursor polypeptide (AA -37 to 1647) 658 0.0 Q5GIA5.1 Q5GIA5_BACHD Alpha-amylase 467 e-129 Q9KFR4.1 Q9KFR4_BACHD Alpha-amylase G-6 465 e-129 A8QWV3.1 A8QWV3_BACHD Alkaline and thermostable amylase 464 e-129 B5MEM6.1 B5MEM6_BACHD Alkaline, thermotolerant, and maltotetraos... 464 e-128 >Q03658.1 Q03658_9BACT Precursor polypeptide (AA -37 to 1647) Length = 1684 Score = 658 bits (1698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/567 (57%), Positives = 408/567 (71%), Gaps = 8/567 (1%) Query: 1 MIKWLSAWVEEFGIDGFRIDTAKHVQADRWKELKTSASSSLAKWRQNNPTKPGADWTDNF 60 +IKW+++WVEEFGIDGFR+DTAKHV+ +RW ELK A +L WR+NNP KPGA+W DNF Sbjct: 317 LIKWITSWVEEFGIDGFRVDTAKHVEIERWAELKNEAEVALQTWRENNPDKPGANWDDNF 376 Query: 61 WMTGEVWGHGLGRTGTYFDNGFDSLINFSFQSANISDLEGLFSRYASELNGDLPNYNMLS 120 WMT EV+GHGLG++ YFD GFDS+INF FQ+AN ++LEGLFSRYA+ +N D P++NMLS Sbjct: 377 WMTAEVFGHGLGKS-EYFDFGFDSVINFEFQNANFNNLEGLFSRYANSINTD-PDFNMLS 434 Query: 121 YLSSHDKGLYNRGNLIQAGTALLLLPGGVQTFYGDETARPFGPTGSDQDQGSRSQMNWSS 180 Y+SSHD LY+R +LIQAGTALLLLPGGVQ FYGDETARP G GSD +QG+RS MNW++ Sbjct: 435 YVSSHDTKLYSRDDLIQAGTALLLLPGGVQVFYGDETARPLGDGGSDPEQGTRSSMNWAN 494 Query: 181 MNQSVLSHWQKLGQFRNNHIAVGAGTHKKIADGPYTFSRTYETGDVLDKVVVATGASGTV 240 +NQ+VLSHWQKLGQFRNNHIA+GAG H+K++D PYTF+RTYE+ D++D+VVVATGA GT Sbjct: 495 INQNVLSHWQKLGQFRNNHIAIGAGAHQKLSDSPYTFARTYESDDIVDEVVVATGAQGTT 554 Query: 241 DVNVSGIFPDGTTVRDAYTKNEVVVSGGKARFTAGTNGVILIENVGVN-KKFPVLTASPA 299 V V G+F DGT VRDAYT +E V+ G A FTAGT G+ILIEN P+++A+P Sbjct: 555 AVTVEGVFEDGTVVRDAYTGDETTVTKGTATFTAGTQGIILIENTAEPVTNLPIVSATPG 614 Query: 300 XXXXXXXXXXXXLSIKNADSGKYTLDGSDPINGTAFTNGTTIPIGADMAINDTKTLKMYA 359 L++ AD GKYTLDGSDP +G F +G I IGADM ++T TL++YA Sbjct: 615 NSSFRTDDITITLNVDRADMGKYTLDGSDPADGLTFMDGEEIVIGADMEFDETATLRLYA 674 Query: 360 TNENGEGTASYEFTKGDPNAKLEVYFKKPSGWGAPSIYFYDTAPKDNDPTWATAPAMTNA 419 NENG T SY + K DP+A LEVYFKKP+ WG P IY+YDT P++ + TW TAP MT Sbjct: 675 ENENGIRTRSYTYRKVDPDALLEVYFKKPADWGTPHIYYYDTFPEEPEVTWTTAPEMTLV 734 Query: 420 GGDWYVYSFDKAEQATVIFKDATGKQLPAQNQAGFTRTTTGWYDGSVWSDTDP--RVVTK 477 DWYVY F+ AE A +IFKD++GKQ+P N+ GF GWYDG W D+DP R + Sbjct: 735 EDDWYVYVFENAESANIIFKDSSGKQIPGPNEPGFFIDQIGWYDGVKWLDSDPFEREPKE 794 Query: 478 P-TAPTNLASSVKTDKTVTLTWNASTDSSGIAGYDVYRNNAKVGSSATTTYKDTGLTAET 536 P T P NL+ T+ TVT W+ S + Y++ R+ V S+ TT+ D L +T Sbjct: 795 PATTPKNLSVVNVTETTVTFEWDQS--DGYVVEYEILRDEDVVASTIRTTFTDEDLNPDT 852 Query: 537 TYTYKVIAKGQSGGTSDPSNELSVKTL 563 TYTY V+A G+ G S PS L V TL Sbjct: 853 TYTYSVVAVGEGGQKSAPSEALKVTTL 879 Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 80/157 (50%), Positives = 103/157 (65%), Gaps = 5/157 (3%) Query: 480 APTNLASSVKTDKTVTLTWNASTDSSGIAGYDVYRNNAKVGSSATTTYKDTGLTAETTYT 539 AP NL + TD TVT+ WNAS + + GY+V R+ +G + TT+ DTGL A+ TYT Sbjct: 891 APENLRIADITDTTVTINWNAS--NGYVTGYEVLRDGVVIGETTRTTFIDTGLDADRTYT 948 Query: 540 YKVIAKGQSGGTSDPSNELSVKTLPSGQGNGNTATIYYKKGYATPYIHYRAEGGNWTAAP 599 Y ++A G G SDPS L V T + GN TIYYKKG+ TPY+HYR EGG WT P Sbjct: 949 YTIVALGDGGQKSDPSEALEVTT--QEKPEGNLVTIYYKKGFDTPYMHYRPEGGEWTIVP 1006 Query: 600 GVKMEDSEIPGYAVYTIDLGTSATRAEVAFNNGSGQW 636 G++ME+SEI GY+ T+D+ A++ EVAFNNG G W Sbjct: 1007 GIRMEESEIAGYSKLTVDI-REASKLEVAFNNGRGAW 1042 Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 49/86 (56%), Positives = 60/86 (69%), Gaps = 4/86 (4%) Query: 554 PSNELSVKTLPSGQG---NGNTATIYYKKGYATPYIHYRAEGGNWTAAPGVKMEDSEIPG 610 PS+E + +P G +GN TIYY+ G+ TPY+HYR EGGNWT APG+KMEDSE Sbjct: 1061 PSHEGRGEIIPGKPGAPIDGNKVTIYYQNGFDTPYVHYRPEGGNWTNAPGLKMEDSEFAS 1120 Query: 611 YAVYTIDLGTSATRAEVAFNNGSGQW 636 Y+ T+D+G A RAEVAFNNG G W Sbjct: 1121 YSRLTLDIG-EANRAEVAFNNGRGLW 1145 Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 42/73 (57%), Positives = 51/73 (69%), Gaps = 1/73 (1%) Query: 570 GNTATIYYKKGYATPYIHYRAEGGNWTAAPGVKMEDSEIPGYAVYTIDLGTSATRAEVAF 629 GN IYYK G+ TPY+HYR EGG WT APG+KM+ SEI GY+ T+D+G A R EVAF Sbjct: 1184 GNEVIIYYKNGFDTPYVHYRPEGGTWTNAPGIKMDKSEIAGYSKITLDIG-RADRVEVAF 1242 Query: 630 NNGSGQWTATIRR 642 N+G G W + R Sbjct: 1243 NDGRGAWDSDNER 1255 Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/87 (45%), Positives = 60/87 (68%), Gaps = 1/87 (1%) Query: 476 TKPTAPTNLASSVKTDKTVTLTWNASTDSSGIAGYDVYRNNAKVGSSATTTYKDTGLTAE 535 T P+ PT+L +++ T TV+L+W AS D +AGY +YR+ ++G + +TTY D+GLTAE Sbjct: 1298 TSPSKPTDL-TAIATAHTVSLSWTASADDVEVAGYKIYRDGVEIGVTESTTYTDSGLTAE 1356 Query: 536 TTYTYKVIAKGQSGGTSDPSNELSVKT 562 TTY+Y V A S S S+EL+++T Sbjct: 1357 TTYSYMVQAYDTSNNFSALSDELTIET 1383 >Q5GIA5.1 Q5GIA5_BACHD Alpha-amylase Length = 958 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 290/663 (43%), Positives = 373/663 (56%), Gaps = 66/663 (9%) Query: 1 MIKWLSAWVEEFGIDGFRIDTAKHVQADRWKELKTSASSSLAKWRQNNPTKPGADWTDNF 60 ++KWLSAWVEEFGIDGFR+DTAKHV+ RW++LK +A+ +L KWR+ NP PGA+WTD+F Sbjct: 307 IVKWLSAWVEEFGIDGFRVDTAKHVELSRWQQLKDAANEALWKWREENPEAPGANWTDDF 366 Query: 61 WMTGEVWGHGLGRTGTYFDNGFDSLINFSFQSAN-------ISDLEGLFSRYASELNGDL 113 WM GEVWGHG+GR+ YFD+GFDS+INF+FQ + + +E FSRYA +N D Sbjct: 367 WMVGEVWGHGVGRS-EYFDHGFDSVINFTFQGEHGNGPAYRLDTMESTFSRYADAINTD- 424 Query: 114 PNYNMLSYLSSHDKGLYNRGNLIQAGTALLLLPGGVQTFYGDETARPFGPTGSDQDQGSR 173 +N+LSYLS HD LY R LI GT L+LLPGGVQ FYGDETARPFGPTGSD QG+R Sbjct: 425 STFNVLSYLSQHDTQLYPRERLIDGGTYLMLLPGGVQVFYGDETARPFGPTGSDPHQGTR 484 Query: 174 SQMNWSSMNQSVLSHWQKLGQFRNNHIAVGAGTHKKIADGPYTFSRTYETGDVLDKVVVA 233 S MNW S+N+ VL HWQK+GQFR+NH+AVGAG H++IA PYTFSRTY GDV D+VVV Sbjct: 485 SSMNWDSVNEEVLHHWQKMGQFRSNHLAVGAGEHRQIAASPYTFSRTYVEGDVDDRVVVV 544 Query: 234 TGASGTVDVNVSGIFPDGTTVRDAYTKNEVVVSGGKARFTAGTNGVILIENVGVNKKFPV 293 GASG ++VS +F DG VRD YT N VV G F A NGVILIE G P Sbjct: 545 VGASGETTIDVSSVFSDGQQVRDFYTGNVTVVENGHVMFPAHRNGVILIERAG--DLLPS 602 Query: 294 LTASPAXXXXXXXXXXXXLSIKNADSGKYTLDGSDPI-NGTAFTNGTTIPIGADMAINDT 352 ++ASPA L +++A+ G YT+DGSDP GTAF NG I +G ++ I+++ Sbjct: 603 VSASPAGGEFDREQQEVTLYVQDAEWGAYTIDGSDPKEEGTAFANGDVITVGRELNIDES 662 Query: 353 KTLKMYATNENGEGTASYEFTKGDPNAKLEVYFKKPSGWGAPSIYFYDTAPKDNDPTWAT 412 TL++YA NE GE A + FTK A +V+ P G A D T Sbjct: 663 LTLRLYAENETGEAKAEFTFTK--VPAYPQVFADPPGGTFA------------GDTLKVT 708 Query: 413 APAMTNAGGDWYV-----YSFDKAEQATVIFKDATG----KQLPAQNQAG-------FTR 456 GG + + +F +Q T+ + G QL A+N+ G FT+ Sbjct: 709 LHTRNVEGGTYSIDGSDEQAFTDGDQITIGKEVEAGGEILLQLKAENELGSMEETYTFTK 768 Query: 457 T---TTGWYDGSVWSDTDPRVVTKPTAPTNLASSVKTDKTVTLTWNASTDSSGIAGYDVY 513 + T + W P + T P K D+ TW+ + + G D Y Sbjct: 769 SAGLTVYFKKPDSWG--TPHLYYYDTNP-------KVDEP---TWSEAPEMEHYEG-DWY 815 Query: 514 RNNAKVGSSATTTYKDTGLTAETTYTYKVIAKGQSGGTSDPSNELSVKTLPSGQGNGNTA 573 + + S +KD G T + G+ G D + G+ Sbjct: 816 THTIEEVESVRLLFKDRG-------TNQWPGPGEPGFFRDQDGWFDGEWHVDRPGDATDI 868 Query: 574 TIYYKKGYATPYIHYRAEGGNWTAAPGVKMEDSEIPGYAVYTIDLGTSATRAEVAFNNGS 633 TIYYK G+ P+IHY G WT PGV + SE GY TI+ ++ AFNNGS Sbjct: 869 TIYYKTGWTHPHIHYSLNQGAWTTLPGVPLTKSEYEGYVKVTIE-AEEGSQLRAAFNNGS 927 Query: 634 GQW 636 GQW Sbjct: 928 GQW 930 >Q9KFR4.1 Q9KFR4_BACHD Alpha-amylase G-6 Length = 958 Score = 465 bits (1196), Expect = e-129, Method: Compositional matrix adjust. Identities = 287/658 (43%), Positives = 368/658 (55%), Gaps = 56/658 (8%) Query: 1 MIKWLSAWVEEFGIDGFRIDTAKHVQADRWKELKTSASSSLAKWRQNNPTKPGADWTDNF 60 ++KWLSAWVEEFGIDGFR+DTAKHV+ RW++LK +A+ +L KWR+ NP PGA+WTD+F Sbjct: 307 IVKWLSAWVEEFGIDGFRVDTAKHVELSRWQQLKDAANEALWKWREENPEAPGANWTDDF 366 Query: 61 WMTGEVWGHGLGRTGTYFDNGFDSLINFSFQSAN-------ISDLEGLFSRYASELNGDL 113 WM GEVWGHG+GR+ YFD+GFDS+INF+FQ + + +E FSRYA+ +N D Sbjct: 367 WMVGEVWGHGVGRS-EYFDHGFDSVINFTFQGEHGNGPAYRLDTMESTFSRYANAINTD- 424 Query: 114 PNYNMLSYLSSHDKGLYNRGNLIQAGTALLLLPGGVQTFYGDETARPFGPTGSDQDQGSR 173 +N+LSYLS HD LY R LI GT L+LLPGGVQ FYGDETARPFGPTGSD QG+R Sbjct: 425 STFNVLSYLSQHDTQLYPRERLIDGGTYLMLLPGGVQVFYGDETARPFGPTGSDPHQGTR 484 Query: 174 SQMNWSSMNQSVLSHWQKLGQFRNNHIAVGAGTHKKIADGPYTFSRTYETGDVLDKVVVA 233 S MNW S+N+ VL HWQK+GQFR+NH+AVGAG H++IA PYTFSRTY GDV D+VVV Sbjct: 485 SSMNWDSVNEEVLHHWQKMGQFRSNHLAVGAGEHRQIAASPYTFSRTYVEGDVDDRVVVV 544 Query: 234 TGASGTVDVNVSGIFPDGTTVRDAYTKNEVVVSGGKARFTAGTNGVILIENVGVNKKFPV 293 GASG ++VS +F DG VRD YT N VV G F A NGVILIE G P Sbjct: 545 VGASGETTIDVSSVFSDGQQVRDFYTGNVTVVENGHVTFPAHRNGVILIERAG--DLLPS 602 Query: 294 LTASPAXXXXXXXXXXXXLSIKNADSGKYTLDGSDPI-NGTAFTNGTTIPIGADMAINDT 352 ++ASPA L +++A+ G YT+DGSDP GTAF NG I +G ++ I+++ Sbjct: 603 VSASPAGGEFDREQQEVILYVQHAEWGAYTIDGSDPKEEGTAFANGDVITVGRELNIDES 662 Query: 353 KTLKMYATNENGEGTASYEFTKGDPNAKLEVYFKKPSGWGAPSIYFYDTAPKDNDPTWAT 412 TL++YA NE GE A + FTK A +V+ P G A D T Sbjct: 663 LTLRLYAENETGEAKAEFTFTK--VPAYPQVFADPPGGTFA------------GDTLKVT 708 Query: 413 APAMTNAGGDWYVYSFDKAEQATVIFKD------------ATGKQLPAQNQAGFTRTTTG 460 GG YS D +++ D T QL A+N+ G T Sbjct: 709 LHTRNVEGG---TYSIDGSDEQAFTDGDEIMIGKGIEAGSETTLQLKAENEFGTIEETYT 765 Query: 461 WYDGSVWSDTDPRVVTKPTA--PTNLASSVKTDKTVTLTWNASTDSSGIAGYDVYRNNAK 518 + + + KP + +L K TW+ + + G D Y + + Sbjct: 766 YTKSTGLT----IYFKKPDSWGTPHLYYYDTNPKVDEPTWSEAPEMEHYEG-DWYTHTIE 820 Query: 519 VGSSATTTYKDTGLTAETTYTYKVIAKGQSGGTSDPSNELSVKTLPSGQGNGNTATIYYK 578 S +KD G T + G+ G D + G+ TIYYK Sbjct: 821 GVESVRLLFKDRG-------TNQWPGPGEPGFFRDQDGWFDGEWHVDRPGDATDITIYYK 873 Query: 579 KGYATPYIHYRAEGGNWTAAPGVKMEDSEIPGYAVYTIDLGTSATRAEVAFNNGSGQW 636 G+ P+IHY G WT PGV + SE GY TI+ ++ AFNNGSGQW Sbjct: 874 TGWTHPHIHYSLNQGAWTTLPGVPLTKSEYEGYVKVTIE-AEEGSQLRAAFNNGSGQW 930 >A8QWV3.1 A8QWV3_BACHD Alkaline and thermostable amylase Length = 958 Score = 464 bits (1195), Expect = e-129, Method: Compositional matrix adjust. Identities = 287/658 (43%), Positives = 367/658 (55%), Gaps = 56/658 (8%) Query: 1 MIKWLSAWVEEFGIDGFRIDTAKHVQADRWKELKTSASSSLAKWRQNNPTKPGADWTDNF 60 ++KWLSAWVEEFGIDGFR+DTAKHV+ RW++LK +A+ +L KWR+ NP PGA+WTD+F Sbjct: 307 IVKWLSAWVEEFGIDGFRVDTAKHVELSRWQQLKDAANEALWKWREENPEAPGANWTDDF 366 Query: 61 WMTGEVWGHGLGRTGTYFDNGFDSLINFSFQSAN-------ISDLEGLFSRYASELNGDL 113 WM GEVWGHG+GR+ YFD+GFDS+INF+FQ + + +E FSRYA +N D Sbjct: 367 WMVGEVWGHGVGRS-EYFDHGFDSVINFTFQGEHGNGPAYRLDTMESTFSRYADAINTD- 424 Query: 114 PNYNMLSYLSSHDKGLYNRGNLIQAGTALLLLPGGVQTFYGDETARPFGPTGSDQDQGSR 173 +N+LSYLS HD LY R LI GT L+LLPGGVQ FYGDETARPFGPTGSD QG+R Sbjct: 425 STFNVLSYLSQHDTQLYPRERLIDGGTYLMLLPGGVQVFYGDETARPFGPTGSDPHQGTR 484 Query: 174 SQMNWSSMNQSVLSHWQKLGQFRNNHIAVGAGTHKKIADGPYTFSRTYETGDVLDKVVVA 233 S MNW S+N+ VL HWQK+GQFR+NH+AVGAG H++IA PYTFSRTY GDV D+VVV Sbjct: 485 SSMNWDSVNEEVLHHWQKMGQFRSNHLAVGAGEHRQIAASPYTFSRTYVEGDVDDRVVVV 544 Query: 234 TGASGTVDVNVSGIFPDGTTVRDAYTKNEVVVSGGKARFTAGTNGVILIENVGVNKKFPV 293 GASG ++VS +F DG VRD YT N VV G F A NGVILIE G P Sbjct: 545 VGASGETTIDVSSVFSDGQQVRDFYTGNVTVVENGHVTFPAHRNGVILIERAG--DLLPS 602 Query: 294 LTASPAXXXXXXXXXXXXLSIKNADSGKYTLDGSDPI-NGTAFTNGTTIPIGADMAINDT 352 ++ASPA L +++A+ G YT+DGSDP GTAF NG I +G ++ I+++ Sbjct: 603 VSASPAGGEFDREQQEVTLYVQHAEWGAYTIDGSDPKEEGTAFANGDVITVGRELNIDES 662 Query: 353 KTLKMYATNENGEGTASYEFTKGDPNAKLEVYFKKPSGWGAPSIYFYDTAPKDNDPTWAT 412 TL++YA NE GE A + FTK A +V+ P G A D T Sbjct: 663 LTLRLYAENETGEAKAEFTFTK--VPAYPQVFADPPGGTFA------------GDTLKVT 708 Query: 413 APAMTNAGGDWYVYSFDKAEQATVIFKD------------ATGKQLPAQNQAGFTRTTTG 460 GG YS D +++ D T QL A+N+ G T Sbjct: 709 LHTRNVEGG---TYSIDGSDEQAFTDGDEIMIGKGIEAGSETTLQLKAENEFGTIEETYT 765 Query: 461 WYDGSVWSDTDPRVVTKPTA--PTNLASSVKTDKTVTLTWNASTDSSGIAGYDVYRNNAK 518 + + + KP + +L K TW+ + + G D Y + + Sbjct: 766 YTKSTGLT----IYFKKPDSWGTPHLYYYDTNPKVDEPTWSEAPEMEHYEG-DWYTHTIE 820 Query: 519 VGSSATTTYKDTGLTAETTYTYKVIAKGQSGGTSDPSNELSVKTLPSGQGNGNTATIYYK 578 S +KD G T + G+ G D + G+ TIYYK Sbjct: 821 GVESVRLLFKDRG-------TNQWPGPGEPGFFRDQDGWFDGEWHVDRPGDATDITIYYK 873 Query: 579 KGYATPYIHYRAEGGNWTAAPGVKMEDSEIPGYAVYTIDLGTSATRAEVAFNNGSGQW 636 G+ P+IHY G WT PGV + SE GY TI+ ++ AFNNGSGQW Sbjct: 874 TGWTHPHIHYSLNQGAWTTLPGVPLTKSEYEGYVKVTIE-AEEGSQLRAAFNNGSGQW 930 >B5MEM6.1 B5MEM6_BACHD Alkaline, thermotolerant, and maltotetraose-producing amylase Length = 958 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 286/658 (43%), Positives = 366/658 (55%), Gaps = 56/658 (8%) Query: 1 MIKWLSAWVEEFGIDGFRIDTAKHVQADRWKELKTSASSSLAKWRQNNPTKPGADWTDNF 60 ++KWLSAWVEEFGIDGFR+DTAKHV+ RW++LK +A+ +L KWR+ NP PGA+WTD+F Sbjct: 307 IVKWLSAWVEEFGIDGFRVDTAKHVELSRWQQLKDAANEALWKWREENPEAPGANWTDDF 366 Query: 61 WMTGEVWGHGLGRTGTYFDNGFDSLINFSFQSAN-------ISDLEGLFSRYASELNGDL 113 WM GEVWGHG+GR+ YFD+GFDS+INF+FQ + + +E FSRYA +N D Sbjct: 367 WMVGEVWGHGVGRS-EYFDHGFDSVINFTFQGEHGNGPAYRLDTMESTFSRYADAINTD- 424 Query: 114 PNYNMLSYLSSHDKGLYNRGNLIQAGTALLLLPGGVQTFYGDETARPFGPTGSDQDQGSR 173 +N+LSYLS HD LY R LI GT L+LLPGGVQ FYGDETARPFGPTGSD QG+R Sbjct: 425 STFNVLSYLSQHDTQLYPRERLIDGGTYLMLLPGGVQVFYGDETARPFGPTGSDPHQGTR 484 Query: 174 SQMNWSSMNQSVLSHWQKLGQFRNNHIAVGAGTHKKIADGPYTFSRTYETGDVLDKVVVA 233 S MNW S+N+ VL HWQK+GQFR+NH+AVGAG H++IA PYTFSRTY GDV D+VVV Sbjct: 485 SSMNWDSVNEEVLHHWQKMGQFRSNHLAVGAGEHRQIAASPYTFSRTYVEGDVDDRVVVV 544 Query: 234 TGASGTVDVNVSGIFPDGTTVRDAYTKNEVVVSGGKARFTAGTNGVILIENVGVNKKFPV 293 GASG ++VS +F DG VRD YT N VV G F A NGVILIE G P Sbjct: 545 VGASGETTIDVSSVFSDGQQVRDFYTGNVTVVENGHVTFPAHRNGVILIERAG--DLLPS 602 Query: 294 LTASPAXXXXXXXXXXXXLSIKNADSGKYTLDGSDPI-NGTAFTNGTTIPIGADMAINDT 352 ++ASPA L +++A+ G YT+DGSDP GTAF NG I +G ++ I+++ Sbjct: 603 VSASPAGGEFDREQQEVTLYVQHAEWGAYTIDGSDPKEEGTAFANGDVITVGRELNIDES 662 Query: 353 KTLKMYATNENGEGTASYEFTKGDPNAKLEVYFKKPSGWGAPSIYFYDTAPKDNDPTWAT 412 TL++YA NE GE A + FTK A +V+ P G A D T Sbjct: 663 LTLRLYAENETGEAKAEFTFTK--VPAYPQVFADPPGGTFA------------GDTLKVT 708 Query: 413 APAMTNAGGDWYVYSFDKAEQATVIFKD------------ATGKQLPAQNQAGFTRTTTG 460 GG YS D +++ D T QL A+N+ G T Sbjct: 709 LHTQNVEGG---TYSIDGSDEQAFTDGDEIMIGKGIEAGSETTLQLKAENEFGTIEETYT 765 Query: 461 WYDGSVWSDTDPRVVTKPTA--PTNLASSVKTDKTVTLTWNASTDSSGIAGYDVYRNNAK 518 + + + KP + +L K TW+ + + G D Y + + Sbjct: 766 YTKSTGLT----IYFKKPDSWGTPHLYYYDTNPKVDEPTWSEAPEMEHYEG-DWYTHTIE 820 Query: 519 VGSSATTTYKDTGLTAETTYTYKVIAKGQSGGTSDPSNELSVKTLPSGQGNGNTATIYYK 578 +KD G T + G+ G D + G+ TIYYK Sbjct: 821 GVERVQLLFKDRG-------TNQWPGPGEPGFFRDQDGWFDGEWHVDRPGDATDITIYYK 873 Query: 579 KGYATPYIHYRAEGGNWTAAPGVKMEDSEIPGYAVYTIDLGTSATRAEVAFNNGSGQW 636 G+ P+IHY G WT PGV + SE GY TI+ ++ AFNNGSGQW Sbjct: 874 TGWTHPHIHYSLNQGAWTTLPGVPLTKSEYEGYVKVTIE-AEEGSQLRAAFNNGSGQW 930 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.129 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,364,415,396 Number of extensions: 201174465 Number of successful extensions: 389010 Number of sequences better than 1.0e-05: 782 Number of HSP's gapped: 388110 Number of HSP's successfully gapped: 973 Length of query: 657 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 515 Effective length of database: 1,722,912,073 Effective search space: 887299717595 Effective search space used: 887299717595 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 135 (56.6 bits)