BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0031.p (307 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KII0.1 B3KII0_9BACI Dipicolinic acid synthetase, A subunit 453 e-125 C0ZF39.1 C0ZF39_BREBN Dipicolinate synthase A chain 360 8e-98 A7GRD3.1 A7GRD3_BACCN Dipicolinic acid synthetase subunit A 313 9e-84 Q732S0.1 Q732S0_BACC1 Dipicolinate synthase, A subunit 313 1e-83 Q6HF12.1 Q6HF12_BACHK Dipicolinate synthase subunit A EC=4.2.1.52 313 2e-83 >B3KII0.1 B3KII0_9BACI Dipicolinic acid synthetase, A subunit Length = 298 Score = 453 bits (1165), Expect = e-125, Method: Compositional matrix adjust. Identities = 216/297 (72%), Positives = 252/297 (84%) Query: 10 MLTGIRIVFLGGDARQIEVIRKCVEMDATVSAAGFDKWDAPSPGVSLEQMSAELLSRADV 69 MLTG+R VF+GGDARQIEVIRKC EMDA+V AGF+K GV+ E ++ ELLS AD Sbjct: 1 MLTGVRTVFVGGDARQIEVIRKCAEMDASVMIAGFEKLQDSFQGVTREPLTPELLSDADA 60 Query: 70 LVLPTVGCDDEGNISALFSTERLQLLEEHIAALPPSCMVYTGMAKSYLRGLCDKYSLKLV 129 L+LP VGCDDEG +SALFS L+L EEHIAA+P ++YTGMAK YLR LCDKY +KLV Sbjct: 61 LILPVVGCDDEGRVSALFSEGPLRLQEEHIAAMPGHGVIYTGMAKPYLRSLCDKYKIKLV 120 Query: 130 ELLSRDDVAIYNSIPTAEGALVMAIQNTDFTIHGSTSMVLGMGRTGFTMARVLQGLGSNV 189 E+L RDDVAIYNSIPTAEGAL+MAIQNTDFTIHGSTSMVLGMGRTGFTMAR LQGLG+ + Sbjct: 121 EILERDDVAIYNSIPTAEGALMMAIQNTDFTIHGSTSMVLGMGRTGFTMARSLQGLGAKI 180 Query: 190 KVGVRKQEHYARAEEMGWKPFMTGELVAHAPEADLIFNTIPSMIITAQVLSRLPRHCVII 249 ++GVRK EHYARAEEMGWKPF+ +L ++ + DL+FNTIP+MI+TAQ++S++PR VII Sbjct: 181 RMGVRKSEHYARAEEMGWKPFLVRDLGSYVSDIDLLFNTIPTMIVTAQIISKMPREAVII 240 Query: 250 DLASAPGGCDFRYAEKRGIKAMLAPGLPGVVAPKSAGIIMAGALVQSISDETFNRGD 306 DLASAPGGCDFRYAEKRGIKAMLAPGLPG+VAPK+AGIIMA LV+ IS+E RGD Sbjct: 241 DLASAPGGCDFRYAEKRGIKAMLAPGLPGIVAPKTAGIIMANTLVELISEEIKIRGD 297 >C0ZF39.1 C0ZF39_BREBN Dipicolinate synthase A chain Length = 300 Score = 360 bits (925), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 165/291 (56%), Positives = 223/291 (76%) Query: 10 MLTGIRIVFLGGDARQIEVIRKCVEMDATVSAAGFDKWDAPSPGVSLEQMSAELLSRADV 69 MLTGI + F+GGDARQ+EVI++C+++DA+V+ GFD ++ G + + ++ ++L D Sbjct: 1 MLTGIHVAFIGGDARQLEVIKRCIQLDASVTLVGFDNLESNFTGATKKPLTCDVLKDVDA 60 Query: 70 LVLPTVGCDDEGNISALFSTERLQLLEEHIAALPPSCMVYTGMAKSYLRGLCDKYSLKLV 129 L+LP VG DD+G + ++F +++LQLL+EH+A+LP C+VYTGMAK YL+ L L LV Sbjct: 61 LILPIVGTDDQGYVESIFCSKQLQLLDEHVASLPSHCVVYTGMAKPYLKKLLASTRLPLV 120 Query: 130 ELLSRDDVAIYNSIPTAEGALVMAIQNTDFTIHGSTSMVLGMGRTGFTMARVLQGLGSNV 189 ELL RDDVAIYNSIPT EGAL+MAIQ+TD TIHGS S+VLG+GRTG +MAR L LG+ V Sbjct: 121 ELLDRDDVAIYNSIPTVEGALMMAIQHTDITIHGSQSIVLGLGRTGLSMARALHALGARV 180 Query: 190 KVGVRKQEHYARAEEMGWKPFMTGELVAHAPEADLIFNTIPSMIITAQVLSRLPRHCVII 249 +VG R+QEH AR EMG PF E+ AD IFNTIP +++TA+V++++P+ I+ Sbjct: 181 RVGARRQEHLARIYEMGLTPFHISEVRQQVTNADFIFNTIPQLLLTAEVIAQMPQSAFIL 240 Query: 250 DLASAPGGCDFRYAEKRGIKAMLAPGLPGVVAPKSAGIIMAGALVQSISDE 300 DLAS PGG DFRYAE+RGIKA+LAPGLPG+VAPK+AG I+A L + I+D+ Sbjct: 241 DLASKPGGTDFRYAERRGIKALLAPGLPGIVAPKTAGQILAQTLSRLIADQ 291 >A7GRD3.1 A7GRD3_BACCN Dipicolinic acid synthetase subunit A Length = 300 Score = 313 bits (803), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 146/295 (49%), Positives = 198/295 (67%) Query: 10 MLTGIRIVFLGGDARQIEVIRKCVEMDATVSAAGFDKWDAPSPGVSLEQMSAELLSRADV 69 MLT + I +GGDARQ+EVIRK VE+DA +S GFD+ D G + E M + D Sbjct: 1 MLTEMHIAVIGGDARQLEVIRKLVELDAKLSLIGFDQLDHGFTGAAKETMQDLDFTSLDA 60 Query: 70 LVLPTVGCDDEGNISALFSTERLQLLEEHIAALPPSCMVYTGMAKSYLRGLCDKYSLKLV 129 ++LP G + +G + +FS E++ + +E + P + +Y+G+ YL L + KLV Sbjct: 61 IILPVAGTNAKGEVDTIFSNEKVSITKEQVEKTPENFTIYSGIGTPYLENLVATTNRKLV 120 Query: 130 ELLSRDDVAIYNSIPTAEGALVMAIQNTDFTIHGSTSMVLGMGRTGFTMARVLQGLGSNV 189 +L RDDVAIYNSIPT EG L+M IQ+TD+TIHGS MVLG GRTG ++AR Q LG++V Sbjct: 121 KLFDRDDVAIYNSIPTVEGTLMMVIQHTDYTIHGSNVMVLGFGRTGMSVARAFQSLGAHV 180 Query: 190 KVGVRKQEHYARAEEMGWKPFMTGELVAHAPEADLIFNTIPSMIITAQVLSRLPRHCVII 249 KVG R+ EH AR EM + PF ++ D++ NT+P +++TA V+SR+P H +II Sbjct: 181 KVGARRSEHIARITEMQFAPFYMQDIGKEVKNVDIVINTVPHLVVTANVISRMPAHTLII 240 Query: 250 DLASAPGGCDFRYAEKRGIKAMLAPGLPGVVAPKSAGIIMAGALVQSISDETFNR 304 DLAS PGG DFRYAEKRG+KA+LAPGLPG+VAPK+AG I+A L Q + + R Sbjct: 241 DLASKPGGTDFRYAEKRGVKALLAPGLPGIVAPKTAGQILANVLSQLLKADMIAR 295 >Q732S0.1 Q732S0_BACC1 Dipicolinate synthase, A subunit Length = 300 Score = 313 bits (803), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 144/297 (48%), Positives = 201/297 (67%) Query: 10 MLTGIRIVFLGGDARQIEVIRKCVEMDATVSAAGFDKWDAPSPGVSLEQMSAELLSRADV 69 MLT + I +GGDARQ+EVIRK VE+DA +S GFD+ D G + E + + D Sbjct: 1 MLTEMHIAVIGGDARQLEVIRKLVELDAKLSLIGFDQLDHGFTGAAKESIQNLDFTSVDA 60 Query: 70 LVLPTVGCDDEGNISALFSTERLQLLEEHIAALPPSCMVYTGMAKSYLRGLCDKYSLKLV 129 ++LP G + +G + +FS E++ + +E I P +Y+G+ YL L + KL+ Sbjct: 61 IILPVAGTNAKGEVDTIFSNEKVSITKEQIENTPEHFTIYSGIGTPYLENLVSTTNRKLI 120 Query: 130 ELLSRDDVAIYNSIPTAEGALVMAIQNTDFTIHGSTSMVLGMGRTGFTMARVLQGLGSNV 189 +L RDDVAIYNSIPT EG L+M IQ+TD+TIHGS MVLG GRTG ++AR Q LG++V Sbjct: 121 KLFDRDDVAIYNSIPTVEGTLMMVIQHTDYTIHGSNVMVLGFGRTGMSVARAFQSLGAHV 180 Query: 190 KVGVRKQEHYARAEEMGWKPFMTGELVAHAPEADLIFNTIPSMIITAQVLSRLPRHCVII 249 KVG R+ EH AR EM + PF ++ + D++ NTIP +++TA V+S++P H ++I Sbjct: 181 KVGARRSEHIARITEMMFSPFHMQDIEKEVGDIDIVINTIPHLVVTANVISKMPAHTLVI 240 Query: 250 DLASAPGGCDFRYAEKRGIKAMLAPGLPGVVAPKSAGIIMAGALVQSISDETFNRGD 306 DLAS PGG DFRYAEKRG+KA+LAPGLPG+VAPK+AG I+A L Q ++++ R + Sbjct: 241 DLASKPGGTDFRYAEKRGVKALLAPGLPGIVAPKTAGQILANVLSQLLAEDVIARKE 297 >Q6HF12.1 Q6HF12_BACHK Dipicolinate synthase subunit A EC=4.2.1.52 Length = 300 Score = 313 bits (801), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 144/297 (48%), Positives = 199/297 (67%) Query: 10 MLTGIRIVFLGGDARQIEVIRKCVEMDATVSAAGFDKWDAPSPGVSLEQMSAELLSRADV 69 MLT + I +GGDARQ+EVIRK VE+DA +S GFD+ D G + E + + D Sbjct: 1 MLTEMHIAVIGGDARQLEVIRKLVELDAKLSLIGFDQLDHGFTGAAKESIQNLDFTSLDA 60 Query: 70 LVLPTVGCDDEGNISALFSTERLQLLEEHIAALPPSCMVYTGMAKSYLRGLCDKYSLKLV 129 ++LP G + +G + +FS E++ + +E I P +Y+G+ YL L + KL+ Sbjct: 61 IILPVAGTNAKGEVDTIFSNEKVSITKEQIENTPEHFTIYSGIGTPYLENLVSTTNRKLI 120 Query: 130 ELLSRDDVAIYNSIPTAEGALVMAIQNTDFTIHGSTSMVLGMGRTGFTMARVLQGLGSNV 189 +L RDDVAIYNSIPT EG L+M IQ+TD+TIHGS MVLG GRTG ++AR Q LG++V Sbjct: 121 KLFDRDDVAIYNSIPTVEGTLMMVIQHTDYTIHGSNVMVLGFGRTGMSVARAFQSLGAHV 180 Query: 190 KVGVRKQEHYARAEEMGWKPFMTGELVAHAPEADLIFNTIPSMIITAQVLSRLPRHCVII 249 KVG R+ EH AR EM + PF + D++ NTIP +++TA V+S++P H ++I Sbjct: 181 KVGARRSEHIARITEMMFSPFHMQNIEKEVENIDIVINTIPHLVVTANVISKMPAHTLVI 240 Query: 250 DLASAPGGCDFRYAEKRGIKAMLAPGLPGVVAPKSAGIIMAGALVQSISDETFNRGD 306 DLAS PGG DFRYAEKRG+KA+LAPGLPG+VAPK+AG I+A L Q ++++ R + Sbjct: 241 DLASKPGGTDFRYAEKRGVKALLAPGLPGIVAPKTAGQILANVLSQLLAEDVIARKE 297 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.136 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,739,553,898 Number of extensions: 68200955 Number of successful extensions: 180661 Number of sequences better than 1.0e-05: 143 Number of HSP's gapped: 180628 Number of HSP's successfully gapped: 143 Length of query: 307 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 172 Effective length of database: 1,788,859,178 Effective search space: 307683778616 Effective search space used: 307683778616 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)