BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0022.p (886 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KII9.1 B3KII9_9BACI Cell divisionFtsK/SpoIIIE 1043 0.0 B1DLG2.1 B1DLG2_9BACL Cell divisionFtsK/SpoIIIE 748 0.0 B4ADS9.1 B4ADS9_BACPU Dna translocase ftsk (Dna translocase spoi... 659 0.0 A8FDF0.1 A8FDF0_BACP2 Stage III sporulation DNA translocase E 654 0.0 C0ZF31.1 C0ZF31_BREBN DNA translocase 630 e-178 >B3KII9.1 B3KII9_9BACI Cell divisionFtsK/SpoIIIE Length = 881 Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust. Identities = 571/879 (64%), Positives = 650/879 (73%), Gaps = 24/879 (2%) Query: 19 VLKYEIYGIMLITISVIALSGEAAVGRSLSNMSGYLLGRFYFVLPLVGIFYGLMVMIHRR 78 VLKYEIYGI+L+T+SVIALSGEA VGRSLS MSGYLLG++YF++PL+GI+YGLMVMIHR+ Sbjct: 15 VLKYEIYGIVLMTLSVIALSGEAPVGRSLSKMSGYLLGKYYFIIPLIGIYYGLMVMIHRK 74 Query: 79 WPSKWTSRHSGALLLVLSMCLMSTISAMEQKLGPLSMLHPGNVLAQIHNXXXXXXXXXXX 138 WP +W SR +G LLLVLS+ LMS+I+ +E KL P+ L+ + ++QIH+ Sbjct: 75 WPKRWNSRRTGVLLLVLSLTLMSSIAGLESKLAPIGQLNASSAMSQIHSDLQGELLHAGA 134 Query: 139 XXEVY-MLGKDISGGYVGALEYAALLWLFGSLGAKLLMIVMLAISFMLITNLSYVELFTL 197 + ++G+DISGGYVGAL++A LL LFGS+GAKL++IVML ISFMLITNLSYV+L + Sbjct: 135 DDGRHPVMGRDISGGYVGALQFALLLMLFGSIGAKLIVIVMLFISFMLITNLSYVDLMRM 194 Query: 198 LRVRVMKLAEGIRQR-TANRPAAVPVTSRPARTGRTAAPQPVXXXXXXXXXX-XXLPSRS 255 RVRV+K E I+++ + + + A+ R P+ + LP R Sbjct: 195 FRVRVVKAGERIQKKMNSQQTKSKAAAKASAKEQRIQLPEDLDEDDDLDDMEGMRLPKRK 254 Query: 256 QPQFLRRIGGWFSGASRTGQPAGEAHPA-DEEADVVLAGT----PSEPIISGFSAGDQSQ 310 PQF + G S ++ + A EA DE A + G E + FS DQS+ Sbjct: 255 APQFFQLFG---SKGNKRNEAAEEAEDVMDESAPLFTVGNGHGEHDEGEVVLFSRADQSE 311 Query: 311 LXXXXXXXXXXMEPVTPIIRDFFEHIRAEGLNAEDREEWSEFSPAARSGAVREAVSGTPP 370 P +PIIRDFFE ++ EG +D+++ P A P Sbjct: 312 EGTDAAFSAPDPVPSSPIIRDFFEQVKQEGRLDDDQDDHEAVMPPAHE---------DPS 362 Query: 371 VNGGATAEEAVPEEDLTRLELDGLLDSAEG--GEXXXXXXXXXXXXXXXXXFRLLAKPNS 428 N +++ V E L ++ G G FRLL+KPN+ Sbjct: 363 GNAASSSNAMVDPETLNGGTNSAVMADTGGQEGSAPAAPPAPPPKPYKLPPFRLLSKPNN 422 Query: 429 GGKSGDQNDYMQTARKLEATLESFGVRAKVLEVVRGPAVTRYEIQPDIGVKVSRIVNLTD 488 GGK GDQNDYMQTARKLEATLESFGVRAKVLEVVRGP+VTRYEIQPDIGVKVSRIVNLTD Sbjct: 423 GGKGGDQNDYMQTARKLEATLESFGVRAKVLEVVRGPSVTRYEIQPDIGVKVSRIVNLTD 482 Query: 489 DIXXXXXXKDIRMEAPIPGKSAIGIEVPNPEVSVVTMREVMETQIFQDAESRLSIAFGRD 548 DI KDIRMEAPIPGKSAIGIEVPN EVS+VTMREVMET FQDAES+LSIAFGRD Sbjct: 483 DIALALAAKDIRMEAPIPGKSAIGIEVPNNEVSLVTMREVMETPTFQDAESKLSIAFGRD 542 Query: 549 ISGQTIVGNLAKMPHLLVAGATGSGKSVCINGIITSILYKAKPNEVKFLMVDPKMVELNV 608 ISGQTIVGNLA+MPHLLVAGATGSGKSVCINGIITSILYKAKP+EVKFLMVDPKMVELNV Sbjct: 543 ISGQTIVGNLARMPHLLVAGATGSGKSVCINGIITSILYKAKPDEVKFLMVDPKMVELNV 602 Query: 609 YNGIPHLLAPVVTDPKRASLALKKIVVEMEKRYELFSKSGTRNVEGYNNLMKDNPAAVLP 668 YNGIPHL+APVVTDPKRASLALKKIVVEMEKRYELFSKSGTRN+EGYNNLMKDN AVLP Sbjct: 603 YNGIPHLMAPVVTDPKRASLALKKIVVEMEKRYELFSKSGTRNIEGYNNLMKDNLPAVLP 662 Query: 669 YIVVIVDELADLMMVAANDVEDAICRLAQMARAAGIHLIIATQRPSVDVITGLIKANIPS 728 YIVVIVDELADLMMVAANDVEDAI RLAQMARAAGIHLIIATQRPSVDVITG+IKANIPS Sbjct: 663 YIVVIVDELADLMMVAANDVEDAITRLAQMARAAGIHLIIATQRPSVDVITGVIKANIPS 722 Query: 729 RIAFGVSSNVDSRTILDMPGAEKLLGRGDMLFLPMGASKPIRVQGAFMSDQEVETIVQYV 788 RIAFGVSS VDSRTILDM GAEKLLGRGDMLF+PMG+SKPIRVQGAFMSD EVE IV +V Sbjct: 723 RIAFGVSSQVDSRTILDMAGAEKLLGRGDMLFMPMGSSKPIRVQGAFMSDHEVENIVDFV 782 Query: 789 SSQGEANYDESIXXXXXXXXXXXXXXXXXLYEQAVQIVLEAKQASVSLLQRRMRVGYTRA 848 QG+A YDES+ LYEQAV IVLEAKQASVSLLQRRMRVGYTRA Sbjct: 783 RDQGQAEYDESLVPEIEESAGADEEELDELYEQAVTIVLEAKQASVSLLQRRMRVGYTRA 842 Query: 849 ARLIDAMEARSVIGPYEGSKPREVLMSLEQY--QHNRIS 885 ARLID+MEAR VIGPYEGSKPREVLMS+EQY Q NRIS Sbjct: 843 ARLIDSMEARGVIGPYEGSKPREVLMSIEQYQQQQNRIS 881 >B1DLG2.1 B1DLG2_9BACL Cell divisionFtsK/SpoIIIE Length = 915 Score = 748 bits (1932), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/467 (80%), Positives = 405/467 (86%) Query: 420 FRLLAKPNSGGKSGDQNDYMQTARKLEATLESFGVRAKVLEVVRGPAVTRYEIQPDIGVK 479 F LLAKP+ + GD D M + RKLEATLESFGV+AKVL+VVRGPAVTRYE+QP GVK Sbjct: 449 FSLLAKPSLMARGGDSADAMDSKRKLEATLESFGVKAKVLDVVRGPAVTRYEVQPASGVK 508 Query: 480 VSRIVNLTDDIXXXXXXKDIRMEAPIPGKSAIGIEVPNPEVSVVTMREVMETQIFQDAES 539 VSRIV+LTDDI KDIRMEAPIPGKSAIGIEVPN EVS+VTMREVMET FQ+A S Sbjct: 509 VSRIVSLTDDIALALAAKDIRMEAPIPGKSAIGIEVPNMEVSMVTMREVMETATFQNAPS 568 Query: 540 RLSIAFGRDISGQTIVGNLAKMPHLLVAGATGSGKSVCINGIITSILYKAKPNEVKFLMV 599 +LSIAFGRDISGQ I+GNLA+MPHLLVAGATGSGKSVCINGIITSILYKA P+EVKFLMV Sbjct: 569 KLSIAFGRDISGQPIIGNLARMPHLLVAGATGSGKSVCINGIITSILYKAAPDEVKFLMV 628 Query: 600 DPKMVELNVYNGIPHLLAPVVTDPKRASLALKKIVVEMEKRYELFSKSGTRNVEGYNNLM 659 DPKMVELNVYNGIPHLLAPVVTDP+RA+LALKKIVVEMEKRYELFSKS TRN+EGYN LM Sbjct: 629 DPKMVELNVYNGIPHLLAPVVTDPRRAALALKKIVVEMEKRYELFSKSSTRNIEGYNALM 688 Query: 660 KDNPAAVLPYIVVIVDELADLMMVAANDVEDAICRLAQMARAAGIHLIIATQRPSVDVIT 719 +NP AVLPYIVVIVDELADLMMVA+NDVED+I RLAQMARAAGIHLIIATQRPSVDVIT Sbjct: 689 AENPKAVLPYIVVIVDELADLMMVASNDVEDSIARLAQMARAAGIHLIIATQRPSVDVIT 748 Query: 720 GLIKANIPSRIAFGVSSNVDSRTILDMPGAEKLLGRGDMLFLPMGASKPIRVQGAFMSDQ 779 G+IKANIPSRIAFGVSS VDSRTILDM GAEKLLGRGDML+LP+G SKPIRVQGAF+SDQ Sbjct: 749 GVIKANIPSRIAFGVSSQVDSRTILDMVGAEKLLGRGDMLYLPVGMSKPIRVQGAFLSDQ 808 Query: 780 EVETIVQYVSSQGEANYDESIXXXXXXXXXXXXXXXXXLYEQAVQIVLEAKQASVSLLQR 839 EVE +V Y Q EA Y E + LY+QAVQIVLEAKQASVSLLQR Sbjct: 809 EVEALVDYARGQAEAEYKEDLVPEVEEESADPEEVLDELYDQAVQIVLEAKQASVSLLQR 868 Query: 840 RMRVGYTRAARLIDAMEARSVIGPYEGSKPREVLMSLEQYQHNRISS 886 RMRVGYTRAARL+D MEAR ++GPYEGSKPREVLMS+EQYQ +RI S Sbjct: 869 RMRVGYTRAARLVDQMEARGIVGPYEGSKPREVLMSMEQYQSSRIPS 915 Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 94/189 (49%), Positives = 127/189 (67%), Gaps = 3/189 (1%) Query: 20 LKYEIYGIMLITISVIALSGEAAVGRSLSNMSGYLLGRFYFVLPLVGIFYGLMVMIHRRW 79 LKYE+YGI+LIT+SVIALSGEA VGRSLS + G LG+FYFVL LVGI+ GL+VM+ R W Sbjct: 15 LKYEVYGILLITVSVIALSGEATVGRSLSKLFGLFLGKFYFVLALVGIYVGLVVMVKRAW 74 Query: 80 PSKWTSRHSGALLLVLSMCLMSTISAMEQKLGPLSMLHPGNVLAQIHNXXXXXXXXXXXX 139 P WT+R +G L+ VL++ L S+I+ +++KL P S L G +L Q+ Sbjct: 75 PRGWTNRRTGLLVFVLALALSSSIAEIDRKLLPSSDLTGGAILHQLGQDMKDELLAFDGA 134 Query: 140 XEVYMLGKDISGGYVGALEYAALLWLFGSLGAKLLMIVMLAISFMLITNLSYVELFTLLR 199 + + + ISGGY+GA+EY+ L LFG G+KL+ VM AI+ ML+T SYVEL + R Sbjct: 135 DDRPISQRAISGGYIGAMEYSMLFTLFGYFGSKLIAGVMYAIAIMLLTGKSYVELARIGR 194 Query: 200 ---VRVMKL 205 +R+ KL Sbjct: 195 DKSIRMFKL 203 >B4ADS9.1 B4ADS9_BACPU Dna translocase ftsk (Dna translocase spoiiie) Length = 790 Score = 659 bits (1699), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/878 (44%), Positives = 535/878 (60%), Gaps = 133/878 (15%) Query: 22 YEIYGIMLITISVIALSGEAAVGRSLSNMSGYLLGRFYFVLPLVGIF-YGLMVMIHRRWP 80 YE+ G++ I I++IA+ VG++ ++ + G +F+L L+G+F +G+ + ++ P Sbjct: 21 YELNGLVCIAIAIIAILQLGVVGQTFVHLFRFFAGE-WFILCLIGLFLFGVTIFWKKQIP 79 Query: 81 SKWTSRHSGALLLVLSMCLMSTISAMEQKLGPLSMLHPGNVLAQIHNXXXXXXXXXXXXX 140 T R +G ++ S+ L+S + Q L + +V+ Sbjct: 80 DMLTRRKAGLYCIIASILLLSHVKLF-QHLSSAGAIGSQSVIRNTF-------------- 124 Query: 141 EVYML-------GKDISGGYVGALEYAALLWLFGSLGAKLLMIVMLAISFMLITNLSYVE 193 E++++ D+ GG +GA+ +AA +LF G++++ IV++ I +LITN S E Sbjct: 125 ELFLMDMKGETGSPDLGGGMIGAVLFAASYFLFAQAGSQIMAIVLMLIGIVLITNRSLQE 184 Query: 194 LFTLLRVRVMKLAEGIRQRTANRPAAVPVTSRPARTGRTAAPQPVXXXXXXXXXXXXLPS 253 + V K+ + Q + A + R + +AP S Sbjct: 185 M-------VKKVTLPVSQFMVKQWKAFVEDMKGIRQAKKSAP-----------------S 220 Query: 254 RSQPQFLRRIGGWFSGASRTGQPAGEAHPADEEADVVL---AGTP--SEPIISGFSAGDQ 308 + Q +R SR + DE+ +++ A P S+PIIS F+ D Sbjct: 221 QKTAQKKKR--------SRIQE-------EDEDDQIIMEEEAPVPDNSQPIISSFADRD- 264 Query: 309 SQLXXXXXXXXXXMEPVTPIIRDFFEHIRAEGLNAEDREEWSEFSPAARSGAVREAVSGT 368 + +TP++ + + E SP ++E+V T Sbjct: 265 --------------DILTPLV--------------QKEQAAKETSP------LQESVQST 290 Query: 369 PPVNGGATAEEAVPEEDLTRLE-LDGLLDSAEGGEXXXXXXXXXXXXXXXXXFRLLAKPN 427 P + A + P T LE D L S + +LA+P Sbjct: 291 PAPSDSADEPKEAPPMTFTELENKDYELPSLD----------------------ILAEPQ 328 Query: 428 SGGKSGDQNDYMQTARKLEATLESFGVRAKVLEVVRGPAVTRYEIQPDIGVKVSRIVNLT 487 G+ D+ + + ARKLE T +SFGV+AKV +V GPAVT+YE+ PD+GVKVS+IVNL+ Sbjct: 329 HSGQQTDKKNIYENARKLEKTFQSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNLS 388 Query: 488 DDIXXXXXXKDIRMEAPIPGKSAIGIEVPNPEVSVVTMREVMETQIFQDAESRLSIAFGR 547 DD+ KDIR+EAPIPGKSAIGIEVPN E+++V+++EV+E++ ++L I GR Sbjct: 389 DDLALALAAKDIRIEAPIPGKSAIGIEVPNAEIAMVSLKEVLESKQNDRPNAKLLIGLGR 448 Query: 548 DISGQTIVGNLAKMPHLLVAGATGSGKSVCINGIITSILYKAKPNEVKFLMVDPKMVELN 607 +ISG+ ++ + KMPHLLVAG+TGSGKSVCINGIITSIL +AKP+EVK +M+DPKMVELN Sbjct: 449 NISGEAVLAEMNKMPHLLVAGSTGSGKSVCINGIITSILMRAKPHEVKMMMIDPKMVELN 508 Query: 608 VYNGIPHLLAPVVTDPKRASLALKKIVVEMEKRYELFSKSGTRNVEGYNNLMK------D 661 VYNGIPHLLAPVVTDPK+AS ALKK+V EME+RYELFS +GTRN+EGYN+ +K + Sbjct: 509 VYNGIPHLLAPVVTDPKKASQALKKVVSEMERRYELFSHTGTRNIEGYNDYIKRMNQSEE 568 Query: 662 NPAAVLPYIVVIVDELADLMMVAANDVEDAICRLAQMARAAGIHLIIATQRPSVDVITGL 721 LPYIVVIVDELADLMMVA++DVED+I RL+QMARAAGIHLIIATQRPSVDVITG+ Sbjct: 569 AKQPELPYIVVIVDELADLMMVASSDVEDSITRLSQMARAAGIHLIIATQRPSVDVITGV 628 Query: 722 IKANIPSRIAFGVSSNVDSRTILDMPGAEKLLGRGDMLFLPMGASKPIRVQGAFMSDQEV 781 IKANIPSRIAF VSS DSRTILDM GAEKLLGRGDMLFLP+GA+KP+RVQGAF+SD+EV Sbjct: 629 IKANIPSRIAFSVSSQTDSRTILDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDEEV 688 Query: 782 ETIVQYVSSQGEANYDESIXXXXXXXXXXXXXXXXXLYEQAVQIVLEAKQASVSLLQRRM 841 E +V +V +Q +A Y E + LY++AV++++ + ASVS+LQRR Sbjct: 689 EHVVDHVITQQKAQYQEEM-IPTEETQDQLTAVDDDLYDEAVELIIGMQTASVSMLQRRF 747 Query: 842 RVGYTRAARLIDAMEARSVIGPYEGSKPREVLMSLEQY 879 R+GYTRAARLIDAME R V+GPYEGSKPREVL+S EQY Sbjct: 748 RIGYTRAARLIDAMEERGVVGPYEGSKPREVLLSKEQY 785 >A8FDF0.1 A8FDF0_BACP2 Stage III sporulation DNA translocase E Length = 790 Score = 654 bits (1688), Expect = 0.0, Method: Compositional matrix adjust. Identities = 390/879 (44%), Positives = 534/879 (60%), Gaps = 135/879 (15%) Query: 22 YEIYGIMLITISVIALSGEAAVGRSLSNMSGYLLGRFYFVLPLVGIF-YGLMVMIHRRWP 80 YE+ G++ I I++IA+ VG++ + + G +F+L L+G+F +G+ + ++ P Sbjct: 21 YELNGLVCIAIAIIAILQLGVVGQTFVYLFRFFAGE-WFILCLIGLFLFGVTIFWKKQIP 79 Query: 81 SKWTSRHSGALLLVLSMCLMSTISAMEQKLGPLSMLHPGNVLAQIHNXXXXXXXXXXXXX 140 T R +G ++ S+ L+S + Q L + +V+ Sbjct: 80 DLLTRRKAGLYCIIASILLLSHVKLF-QHLSSAGAIGSQSVIRNTF-------------- 124 Query: 141 EVYML-------GKDISGGYVGALEYAALLWLFGSLGAKLLMIVMLAISFMLITNLSYVE 193 E++++ D+ GG +GA+ +AA +LF G++++ IV++ I +LITN S E Sbjct: 125 ELFLMDMKGETGSPDLGGGMIGAVLFAASYFLFAQAGSQIMAIVLMLIGIVLITNRSLQE 184 Query: 194 LFTLLRVRVMKLAEGIRQRTANRPAAVPVTSRPARTGRTAAPQPVXXXXXXXXXXXXLPS 253 + V K+ + Q + A + R + +AP P Sbjct: 185 M-------VKKVTLPVSQFMVKQWKAFVEDMKGIRQAKKSAP----------------PQ 221 Query: 254 RSQPQFLRRIGGWFSGASRTGQPAGEAHPADEEADVVL----AGTP--SEPIISGFSAGD 307 ++ + R SR + ++E D +L A P S+PIIS F+ D Sbjct: 222 KTAEKKKR---------SRIQE--------EDEDDQILVEEEAPMPDNSQPIISSFADRD 264 Query: 308 QSQLXXXXXXXXXXMEPVTPIIRDFFEHIRAEGLNAEDREEWSEFSPAARSGAVREAVSG 367 + +TP+++ E + A + ++E+V Sbjct: 265 ---------------DILTPLVQK--EQV------------------AKETTPLQESVQS 289 Query: 368 TPPVNGGATAEEAVPEEDLTRLE-LDGLLDSAEGGEXXXXXXXXXXXXXXXXXFRLLAKP 426 TP + A + P T LE D L S + +LA+P Sbjct: 290 TPSPSDSADEPKDAPPMTFTELENKDYELPSLD----------------------ILAEP 327 Query: 427 NSGGKSGDQNDYMQTARKLEATLESFGVRAKVLEVVRGPAVTRYEIQPDIGVKVSRIVNL 486 G+ D+ + + ARKLE T +SFGV+AKV +V GPAVT+YE+ PD+GVKVS+IVNL Sbjct: 328 QHSGQQTDKKNIYENARKLEKTFQSFGVKAKVTQVHLGPAVTKYEVYPDVGVKVSKIVNL 387 Query: 487 TDDIXXXXXXKDIRMEAPIPGKSAIGIEVPNPEVSVVTMREVMETQIFQDAESRLSIAFG 546 +DD+ KDIR+EAPIPGKSAIGIEVPN E+++V+++EV+E++ ++L I G Sbjct: 388 SDDLALALAAKDIRIEAPIPGKSAIGIEVPNAEIAMVSLKEVLESKQNDRPNAKLLIGLG 447 Query: 547 RDISGQTIVGNLAKMPHLLVAGATGSGKSVCINGIITSILYKAKPNEVKFLMVDPKMVEL 606 R+ISG+ ++ + KMPHLLVAG+TGSGKSVCINGIITSIL +AKP+EVK +M+DPKMVEL Sbjct: 448 RNISGEAVLAEMNKMPHLLVAGSTGSGKSVCINGIITSILMRAKPHEVKMMMIDPKMVEL 507 Query: 607 NVYNGIPHLLAPVVTDPKRASLALKKIVVEMEKRYELFSKSGTRNVEGYNNLMK------ 660 NVYNGIPHLLAPVVTDPK+AS ALKK+V EME+RYELFS +GTRN+EGYN+ +K Sbjct: 508 NVYNGIPHLLAPVVTDPKKASQALKKVVSEMERRYELFSHTGTRNIEGYNDYIKRMNQSE 567 Query: 661 DNPAAVLPYIVVIVDELADLMMVAANDVEDAICRLAQMARAAGIHLIIATQRPSVDVITG 720 + LPYIVVIVDELADLMMVA++DVED+I RL+QMARAAGIHLIIATQRPSVDVITG Sbjct: 568 EAKQPELPYIVVIVDELADLMMVASSDVEDSITRLSQMARAAGIHLIIATQRPSVDVITG 627 Query: 721 LIKANIPSRIAFGVSSNVDSRTILDMPGAEKLLGRGDMLFLPMGASKPIRVQGAFMSDQE 780 +IKANIPSRIAF VSS DSRTILDM GAEKLLGRGDMLFLP+GA+KP+RVQGAF+SD+E Sbjct: 628 VIKANIPSRIAFSVSSQTDSRTILDMGGAEKLLGRGDMLFLPVGANKPVRVQGAFLSDEE 687 Query: 781 VETIVQYVSSQGEANYDESIXXXXXXXXXXXXXXXXXLYEQAVQIVLEAKQASVSLLQRR 840 VE +V +V +Q +A Y E + LY++AV++++ + ASVS+LQRR Sbjct: 688 VEHVVDHVITQQKAQYQEEM-IPTEETQDQLAAVDDDLYDEAVELIIGMQTASVSMLQRR 746 Query: 841 MRVGYTRAARLIDAMEARSVIGPYEGSKPREVLMSLEQY 879 R+GYTRAARLIDAME R V+GPYEGSKPREVL+S EQY Sbjct: 747 FRIGYTRAARLIDAMEERGVVGPYEGSKPREVLLSKEQY 785 >C0ZF31.1 C0ZF31_BREBN DNA translocase Length = 792 Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust. Identities = 340/553 (61%), Positives = 398/553 (71%), Gaps = 47/553 (8%) Query: 327 PIIRDFFEHIRAEGLNAEDREEWSEFSPAARSGAVREAVSGTPPVNGG--ATAEEAVPEE 384 P+IRDF + I E ED E P N G A A + P + Sbjct: 268 PLIRDFTDRIALE----EDEE----------------------PSNPGHQARAAQPKPNQ 301 Query: 385 DLT-----RLELDGLLDSAEGGEXXXXXXXXXXXXXXXXXFRLLAKPNSGGKSGDQNDYM 439 ++T E+ G +D+ E ++LA+P + +G D+ Sbjct: 302 EITFALEGEAEIFGTIDTGE---------EKNTIPYELPSLQMLARPKASA-TGKDVDHT 351 Query: 440 QTARKLEATLESFGVRAKVLEVVRGPAVTRYEIQPDIGVKVSRIVNLTDDIXXXXXXKDI 499 A KL TL+SFGV A V EV RGPAVTRYE+QP GVKVSRIV+LTDD+ KDI Sbjct: 352 SNAAKLVQTLKSFGVNATVSEVHRGPAVTRYEVQPATGVKVSRIVSLTDDLALALAAKDI 411 Query: 500 RMEAPIPGKSAIGIEVPNPEVSVVTMREVMETQIFQDAESRLSIAFGRDISGQTIVGNLA 559 R+EAPIPGKSAIGIEVPN EV+VV++REV+E +QDA +L++A GRDISG+ IV +L Sbjct: 412 RIEAPIPGKSAIGIEVPNSEVAVVSLREVLEAPEYQDAAGKLTVALGRDISGEPIVADLT 471 Query: 560 KMPHLLVAGATGSGKSVCINGIITSILYKAKPNEVKFLMVDPKMVELNVYNGIPHLLAPV 619 KMPHLLVAGATGSGKSVCING+I SIL+KAKP EVK +MVDPKMVELNVYNGIPHLLAPV Sbjct: 472 KMPHLLVAGATGSGKSVCINGLIMSILFKAKPEEVKLMMVDPKMVELNVYNGIPHLLAPV 531 Query: 620 VTDPKRASLALKKIVVEMEKRYELFSKSGTRNVEGYNNLMKDNPAAVLPYIVVIVDELAD 679 VTDP+RAS+ALKK+V EME+RY LF+K+G+RN+E YN ++ P LPYIVVIVDELAD Sbjct: 532 VTDPRRASVALKKVVAEMERRYNLFAKTGSRNIEMYNAQVEGTP---LPYIVVIVDELAD 588 Query: 680 LMMVAANDVEDAICRLAQMARAAGIHLIIATQRPSVDVITGLIKANIPSRIAFGVSSNVD 739 LMMVA +VEDAICRLAQMARA+GIHLIIATQRPSVDVITG+IKANIPSRIAFGVSS D Sbjct: 589 LMMVAPGEVEDAICRLAQMARASGIHLIIATQRPSVDVITGVIKANIPSRIAFGVSSMAD 648 Query: 740 SRTILDMPGAEKLLGRGDMLFLPMGASKPIRVQGAFMSDQEVETIVQYVSSQGEANYDES 799 SRTILDM GAEKLLGRGDML LPMGASKP RVQGAF+SD+EVE +V++V Q E Y+E Sbjct: 649 SRTILDMGGAEKLLGRGDMLSLPMGASKPTRVQGAFVSDKEVEEVVRFVKEQQEVRYNEE 708 Query: 800 IXXXXXXXXXXXXXXXXXLYEQAVQIVLEAKQASVSLLQRRMRVGYTRAARLIDAMEARS 859 + LY+QAVQIV EA+ AS SLLQRR+RVGYTRAARLID MEA+ Sbjct: 709 M-IPGDVQEEQQPVVDDELYDQAVQIVSEAQTASASLLQRRLRVGYTRAARLIDMMEAQG 767 Query: 860 VIGPYEGSKPREV 872 V+GPYEGSKPREV Sbjct: 768 VVGPYEGSKPREV 780 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.135 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,421,609,557 Number of extensions: 169187316 Number of successful extensions: 487778 Number of sequences better than 1.0e-05: 2296 Number of HSP's gapped: 483464 Number of HSP's successfully gapped: 2584 Length of query: 886 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 741 Effective length of database: 1,694,649,028 Effective search space: 1255734929748 Effective search space used: 1255734929748 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)