BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0020.p (412 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIJ6.1 B3KIJ6_9BACI Peptidase M16 domain protein 579 e-163 B1DLG0.1 B1DLG0_9BACL Peptidase M16 domain protein 552 e-155 A9U854.1 A9U854_PHYPA Predicted protein 367 e-99 C0ZF24.1 C0ZF24_BREBN Putative uncharacterized protein 365 7e-99 C5D9F4.1 C5D9F4_9BACI Peptidase M16 domain protein 348 6e-94 >B3KIJ6.1 B3KIJ6_9BACI Peptidase M16 domain protein Length = 385 Score = 579 bits (1493), Expect = e-163, Method: Compositional matrix adjust. Identities = 272/384 (70%), Positives = 318/384 (82%) Query: 29 VTPTALIPFVLRRGTANYPETTQFRERLEELYGAGFGFDIYKRGDYQIVQFRMDTINDSF 88 +T TAL PFVLRRGT +YPET FRE+LE+LYGAGFGFD+YKRGDYQIV FRMDTINDSF Sbjct: 1 MTSTALTPFVLRRGTVSYPETRAFREQLEQLYGAGFGFDVYKRGDYQIVHFRMDTINDSF 60 Query: 89 VQSKESLLGESFAFLGEVLTKPLLEDGSFRASYVATERETVRKKLEAIVNDKIRYAAERC 148 V+S ESLL SFAFLGE T+P+LE+G+FR SYV TER+TVRKKLE+IVNDKIRYAAERC Sbjct: 61 VKSPESLLRSSFAFLGEAFTQPVLENGAFRKSYVQTERDTVRKKLESIVNDKIRYAAERC 120 Query: 149 IEEMCRQEPYRLHPLGQRADLDGITPESLYQSYHSWLGGAILDLYVVGDTTPEEVEKLVT 208 IE MC+ EPYRLHPLG+R DLDGITPE LY+SY WL ++LDLYVVGDT+ +EV+ LV Sbjct: 121 IEVMCKNEPYRLHPLGERKDLDGITPEDLYESYQKWLQESVLDLYVVGDTSLDEVKTLVE 180 Query: 209 RHFGRTHGNAAGYSSNFSPVAVTEVRTVEEKLDVNQGKLNMGLRTPITYKDDRYASALMY 268 HF + Y + + A E +TV EKLD+NQGKLNMGLR+ ITY DD YA+AL+Y Sbjct: 181 EHFKLNRTESRDYVPSITRTAANETQTVVEKLDINQGKLNMGLRSTITYGDDEYAAALLY 240 Query: 269 NGILGGYPHSKLFVNVREKESLAYYASSRYDGHKGIGTIQSGIETQNYSKAVDIIRKQLD 328 NGILGGYPHSKLFVNVREKESLAYYASSRYDGHKGI TIQSGIE QN+ KAVDIIR+QLD Sbjct: 241 NGILGGYPHSKLFVNVREKESLAYYASSRYDGHKGIATIQSGIEVQNFEKAVDIIRQQLD 300 Query: 329 ELQAGNISDLELSQTKAMIRNLLSEIQDSAFEMISFDFNRQLSGKDRSAQELLAQVDSTG 388 ++ G ISD+E++QTKAMIRN++ E+QDSAFEMI++DFNR LSG++R+ ELL QV+ Sbjct: 301 DMAKGAISDIEMTQTKAMIRNVIKEMQDSAFEMIAYDFNRTLSGRERTPDELLKQVEGIA 360 Query: 389 AEDVKAAAGTFELDTIYFLTGKGE 412 +DVK AA F LDTIYFL G+ E Sbjct: 361 VDDVKQAASAFSLDTIYFLKGQKE 384 >B1DLG0.1 B1DLG0_9BACL Peptidase M16 domain protein Length = 440 Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust. Identities = 266/412 (64%), Positives = 320/412 (77%) Query: 1 MRIHVLPTKAFKTFAISLYAGVPLDEHTVTPTALIPFVLRRGTANYPETTQFRERLEELY 60 +R+HV+PTK FKTFAISL+AG+PL E+ VT TAL PFVLRRGT + PET FRERL++LY Sbjct: 28 IRLHVMPTKRFKTFAISLFAGLPLSENAVTKTALAPFVLRRGTVSTPETKAFRERLDDLY 87 Query: 61 GAGFGFDIYKRGDYQIVQFRMDTINDSFVQSKESLLGESFAFLGEVLTKPLLEDGSFRAS 120 GAGFGFD+YKRGD QIVQFRMD IND FV S LL S FLGEV+T+P+ EDG FR Sbjct: 88 GAGFGFDVYKRGDSQIVQFRMDVINDHFVSSDVPLLSSSLRFLGEVVTEPVTEDGVFRRK 147 Query: 121 YVATERETVRKKLEAIVNDKIRYAAERCIEEMCRQEPYRLHPLGQRADLDGITPESLYQS 180 YV E++T+ K+LE+IVNDKIRYAAERC+EEMC EPYRLHPLG+ ++ ITPESLY Sbjct: 148 YVDAEKQTLTKRLESIVNDKIRYAAERCMEEMCANEPYRLHPLGKLEEISSITPESLYSQ 207 Query: 181 YHSWLGGAILDLYVVGDTTPEEVEKLVTRHFGRTHGNAAGYSSNFSPVAVTEVRTVEEKL 240 Y WL A DLYVVGDTT EEV L F G+ A YS+ V V+TV E++ Sbjct: 208 YKQWLSEAAFDLYVVGDTTMEEVAALAKEAFRIEDGSPASYSTPSITHEVRNVKTVVERM 267 Query: 241 DVNQGKLNMGLRTPITYKDDRYASALMYNGILGGYPHSKLFVNVREKESLAYYASSRYDG 300 DVNQGKLNMGLRT + Y D YA++LMYNGILGGYPHSKLF+NVREKESLAYYA+SR DG Sbjct: 268 DVNQGKLNMGLRTNVGYGDKDYAASLMYNGILGGYPHSKLFLNVREKESLAYYAASRLDG 327 Query: 301 HKGIGTIQSGIETQNYSKAVDIIRKQLDELQAGNISDLELSQTKAMIRNLLSEIQDSAFE 360 HKG+ TIQSGIE NY KAV II++QL+ ++ GN+SDLE++QTKAMI N L E+QDSA+E Sbjct: 328 HKGLLTIQSGIEIANYEKAVTIIKEQLESMRQGNLSDLEMNQTKAMIANHLRELQDSAYE 387 Query: 361 MISFDFNRQLSGKDRSAQELLAQVDSTGAEDVKAAAGTFELDTIYFLTGKGE 412 MI++DFN LSGK+R+AQ+LL Q+++ AED+ AG +LDTIYFL + E Sbjct: 388 MIAYDFNAVLSGKERTAQQLLDQIEAVTAEDIVRVAGLAQLDTIYFLRDQKE 439 >A9U854.1 A9U854_PHYPA Predicted protein Length = 262 Score = 367 bits (943), Expect = e-99, Method: Compositional matrix adjust. Identities = 180/261 (68%), Positives = 206/261 (78%) Query: 152 MCRQEPYRLHPLGQRADLDGITPESLYQSYHSWLGGAILDLYVVGDTTPEEVEKLVTRHF 211 MCR EPYRLH LGQR DL+ ITPESL+ Y WL A +DLYVVGDTT EEVEKLV HF Sbjct: 1 MCRNEPYRLHALGQRQDLEKITPESLHDGYRKWLSEASMDLYVVGDTTLEEVEKLVNAHF 60 Query: 212 GRTHGNAAGYSSNFSPVAVTEVRTVEEKLDVNQGKLNMGLRTPITYKDDRYASALMYNGI 271 Y + E RTV EK++V+QGKLN+GLRT ITY DD YA+ALMYNGI Sbjct: 61 DLGSEPGITYKTETPVRQSGEPRTVVEKMEVSQGKLNLGLRTSITYGDDHYAAALMYNGI 120 Query: 272 LGGYPHSKLFVNVREKESLAYYASSRYDGHKGIGTIQSGIETQNYSKAVDIIRKQLDELQ 331 LGGYPHSKLF+NVREK SLAYY SSRYDGHKGIGTIQSGIE QNY KA+DII+ QL+E++ Sbjct: 121 LGGYPHSKLFMNVREKASLAYYCSSRYDGHKGIGTIQSGIEVQNYEKALDIIKGQLEEMR 180 Query: 332 AGNISDLELSQTKAMIRNLLSEIQDSAFEMISFDFNRQLSGKDRSAQELLAQVDSTGAED 391 +G I+DLE+SQTKAMIRNLL EI+DSAFEMI++DFNRQ SGKDRS +ELL QV+ D Sbjct: 181 SGRITDLEMSQTKAMIRNLLLEIEDSAFEMIAYDFNRQFSGKDRSREELLQQVEDIQVAD 240 Query: 392 VKAAAGTFELDTIYFLTGKGE 412 V+AAA TF+LDTIYFL G+ E Sbjct: 241 VQAAASTFDLDTIYFLKGQKE 261 >C0ZF24.1 C0ZF24_BREBN Putative uncharacterized protein Length = 431 Score = 365 bits (936), Expect = 7e-99, Method: Compositional matrix adjust. Identities = 180/410 (43%), Positives = 262/410 (63%) Query: 1 MRIHVLPTKAFKTFAISLYAGVPLDEHTVTPTALIPFVLRRGTANYPETTQFRERLEELY 60 M +H+LPTK FKT I L E VT TAL+ V++R +A +PET R L+ LY Sbjct: 18 MNVHILPTKKFKTTTIVTMIEQALSEEHVTKTALLAMVMKRASARFPETKLLRAHLDFLY 77 Query: 61 GAGFGFDIYKRGDYQIVQFRMDTINDSFVQSKESLLGESFAFLGEVLTKPLLEDGSFRAS 120 GA F D+ K+G+ QI+Q M+ N+ ++ ++ SLL ++ F+G++L +P +++ +F Sbjct: 78 GAIFDVDVMKKGERQILQIYMEVPNEKYLSNEASLLEQAIEFVGDMLVRPYVQNNAFSEK 137 Query: 121 YVATERETVRKKLEAIVNDKIRYAAERCIEEMCRQEPYRLHPLGQRADLDGITPESLYQS 180 Y+A E+ET+RK++E++++DK++YA +R EEMC+ EP+ L G+ ADL IT + LYQ Sbjct: 138 YMAQEKETLRKRIESLIDDKMKYANQRVTEEMCKGEPFSLLVQGRVADLPKITGQELYQY 197 Query: 181 YHSWLGGAILDLYVVGDTTPEEVEKLVTRHFGRTHGNAAGYSSNFSPVAVTEVRTVEEKL 240 + + ++VVGD +EV + + +H + V+ V ++L Sbjct: 198 FKEITTTNPIHMFVVGDVEQQEVSEAIRKHIPLERSQVGEPQIESTAKDVSAESEVIDRL 257 Query: 241 DVNQGKLNMGLRTPITYKDDRYASALMYNGILGGYPHSKLFVNVREKESLAYYASSRYDG 300 DVNQ KLN+G RT ITYKD+ Y + L+YNGILGG+PHSKLFVNVREKESLAYYA SR + Sbjct: 258 DVNQAKLNIGCRTQITYKDEDYPTLLLYNGILGGFPHSKLFVNVREKESLAYYAVSRLES 317 Query: 301 HKGIGTIQSGIETQNYSKAVDIIRKQLDELQAGNISDLELSQTKAMIRNLLSEIQDSAFE 360 HKGI I SGI+ Y +AV+II++QLD ++ G IS+ E+SQT+A + N E+ DSA Sbjct: 318 HKGILMIMSGIDVSKYQRAVEIIKQQLDLMRQGTISEEEMSQTRATLSNQFRELLDSARG 377 Query: 361 MISFDFNRQLSGKDRSAQELLAQVDSTGAEDVKAAAGTFELDTIYFLTGK 410 MI F +N +SG+ R +ELLA ++ ED+K A +DTIY L K Sbjct: 378 MIEFTYNGVISGRPRKIEELLAGINQATIEDIKKVANKMTIDTIYLLRDK 427 >C5D9F4.1 C5D9F4_9BACI Peptidase M16 domain protein Length = 426 Score = 348 bits (893), Expect = 6e-94, Method: Compositional matrix adjust. Identities = 177/410 (43%), Positives = 252/410 (61%), Gaps = 1/410 (0%) Query: 1 MRIHVLPTKAFKTFAISLYAGVPLDEHTVTPTALIPFVLRRGTANYPETTQFRERLEELY 60 M +H +PT +KT + PL + TVT AL+P+VL+ GTA YP Q R L+ELY Sbjct: 12 MNVHTIPTDKYKTNTLVWKMKAPLTKETVTLRALLPYVLQSGTAEYPSVKQLRTYLDELY 71 Query: 61 GAGFGFDIYKRGDYQIVQFRMDTINDSFVQSKESLLGESFAFLGEVLTKPLLEDGSFRAS 120 GA D+ K+G+ I+ R+D N+ F+Q K LL ++ L +++ +P L+DG F Sbjct: 72 GATLNVDLSKKGESHIITIRIDVANEVFLQEKIPLLRKALKLLSDIVLRPALQDGRFVDH 131 Query: 121 YVATERETVRKKLEAIVNDKIRYAAERCIEEMCRQEPYRLHPLGQRADLDGITPESLYQS 180 VA E+ ++++++A+ +DK+RYA R I+EMC+ EPY LH G+ D+D IT E L+Q Sbjct: 132 IVAQEKRALKQRIQAVYDDKMRYANLRLIQEMCKGEPYALHANGELDDVDRITAEQLFQY 191 Query: 181 YHSWLGGAILDLYVVGDTTPEEVEKLVTRHFGRTHGNA-AGYSSNFSPVAVTEVRTVEEK 239 Y L +DLYV+GD E V + V HF + A S +V V EK Sbjct: 192 YKKTLEEDEIDLYVIGDVQEETVLEAVASHFSLPNRTVRASVREIVSTKTRDKVNEVIEK 251 Query: 240 LDVNQGKLNMGLRTPITYKDDRYASALMYNGILGGYPHSKLFVNVREKESLAYYASSRYD 299 DV QGKLN+G RT +TY+DD Y + M+NGI GG+ HSKLF+NVREK SLAYYA+SR + Sbjct: 252 QDVKQGKLNIGYRTNVTYEDDDYYALQMFNGIFGGFSHSKLFINVREKASLAYYAASRLE 311 Query: 300 GHKGIGTIQSGIETQNYSKAVDIIRKQLDELQAGNISDLELSQTKAMIRNLLSEIQDSAF 359 HKG+ + SGI NY KA+ II KQ++ ++ G+ +D E++QTKA+IRN L E D+ Sbjct: 312 SHKGLLMVMSGIAPSNYQKALQIIEKQMEAMKNGDFTDEEITQTKAVIRNQLLETIDTPR 371 Query: 360 EMISFDFNRQLSGKDRSAQELLAQVDSTGAEDVKAAAGTFELDTIYFLTG 409 ++ ++ +S + R +E L+ D E++ AG ELDTIYFLTG Sbjct: 372 GLVEVLYHNVVSKRKRPIEEWLSGADRVSREEIVRVAGKVELDTIYFLTG 421 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,414,082,326 Number of extensions: 101934040 Number of successful extensions: 250611 Number of sequences better than 1.0e-05: 654 Number of HSP's gapped: 250635 Number of HSP's successfully gapped: 655 Length of query: 412 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 274 Effective length of database: 1,760,596,133 Effective search space: 482403340442 Effective search space used: 482403340442 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)