BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0280.0013.p
         (54 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIK2.1 B3KIK2_9BACI Putative uncharacterized protein                 84   3e-15
B1I2C0.1 B1I2C0_DESAP Putative uncharacterized protein                 59   2e-07

>B3KIK2.1 B3KIK2_9BACI Putative uncharacterized protein
          Length = 57

 Score = 84.3 bits (207), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/54 (74%), Positives = 45/54 (83%)

Query: 1  MTASWIVTGLGIIVSLLGYYLTPSAWGYGILGFGLAHILLGILDMFRAPSRSRQ 54
          MT +WI+ GLG+IVSLLGYYL PS+WGYGILGFGLAHILLGIL MFR P    +
Sbjct: 1  MTVNWIIFGLGVIVSLLGYYLIPSSWGYGILGFGLAHILLGILSMFRRPVHDEK 54


>B1I2C0.1 B1I2C0_DESAP Putative uncharacterized protein
          Length = 59

 Score = 58.9 bits (141), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 26/49 (53%), Positives = 37/49 (75%)

Query: 4  SWIVTGLGIIVSLLGYYLTPSAWGYGILGFGLAHILLGILDMFRAPSRS 52
          SWIV GLG+IV+ +G+      WG G++GFGLAHI+LGI+D+FR   ++
Sbjct: 11 SWIVIGLGVIVAAVGWLFVAGVWGAGLVGFGLAHIVLGIIDLFRPTVKT 59


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.329    0.146    0.470 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 380,920,344
Number of extensions: 12814066
Number of successful extensions: 55442
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 55445
Number of HSP's successfully gapped: 2
Length of query: 54
Length of database: 3,060,696,203
Length adjustment: 27
Effective length of query: 27
Effective length of database: 2,806,328,798
Effective search space: 75770877546
Effective search space used: 75770877546
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 125 (52.8 bits)