BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0011.p (195 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIK4.1 B3KIK4_9BACI CDP-diacylglycerol--glycerol-3-phosphate 3... 303 5e-81 B1DLF3.1 B1DLF3_9BACL CDP-diacylglycerol--glycerol-3-phosphate 3... 231 3e-59 C0ZF17.1 C0ZF17_BREBN Probable CDP-diacylglycerol--glycerol-3-ph... 228 2e-58 C3J7F1.1 C3J7F1_9BACI CDP-diacylglycerol/glycerol-3-phosphate 3-... 212 1e-53 B7YFQ1.1 B7YFQ1_9BACI CDP-diacylglycerol/glycerol-3-phosphate 3-... 212 1e-53 >B3KIK4.1 B3KIK4_9BACI CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Length = 195 Score = 303 bits (776), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 148/191 (77%), Positives = 172/191 (90%) Query: 1 VNLPNRITLARICLIPIMMFFLLMNFSFYPEPIHWGSFQLSFNHLIAAVIFLLAASTDGI 60 +NLPNRITLARICLIP+MM FLL++F FYP+PI W F L +N LIAA+IF+LAASTDGI Sbjct: 1 MNLPNRITLARICLIPVMMIFLLVDFDFYPDPIVWNDFVLPYNQLIAALIFILAASTDGI 60 Query: 61 DGYIARKYNMVTNLGKLLDPLADKLLVSAVLISLVELGRCDSWIAIVIISREFAVTGLRQ 120 DGY+ARK NMVTNLGKLLDPLADKLLV+A+LISLVE+G+C+SWIA+VIISREFAVTGLRQ Sbjct: 61 DGYLARKNNMVTNLGKLLDPLADKLLVAAILISLVEMGKCESWIAVVIISREFAVTGLRQ 120 Query: 121 VALLEGKVVAASKWGKIKTVIQIVAISLLLLNNFPFQFVSIPVDDIAIWAAALVTIYSGI 180 +ALLEG VVAA + GKIKTVIQIVAI LL+NNFPF F+ IP D IAIWAAAL+TIYSGI Sbjct: 121 IALLEGSVVAAGQSGKIKTVIQIVAIVALLINNFPFVFLGIPFDVIAIWAAALITIYSGI 180 Query: 181 DYFVKNKDLLE 191 +YFV+N+ LL+ Sbjct: 181 EYFVQNRHLLK 191 >B1DLF3.1 B1DLF3_9BACL CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Length = 192 Score = 231 bits (588), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 124/194 (63%), Positives = 156/194 (80%), Gaps = 3/194 (1%) Query: 1 VNLPNRITLARICLIPIMMFFLLMNFSFYPEPIHWGS-FQLSFNHLIAAVIFLLAASTDG 59 +NL NRITLARI L+PI+M FLL+N +P+ +G + +++N +IAA+IF++AASTDG Sbjct: 1 MNLANRITLARIILVPIIMVFLLVNIDI--KPLAFGDDYSITYNQIIAAIIFIIAASTDG 58 Query: 60 IDGYIARKYNMVTNLGKLLDPLADKLLVSAVLISLVELGRCDSWIAIVIISREFAVTGLR 119 +DGYIARK +VTNLGKLLDPLADKLLV+AVLISLV++ + +W+AIVIISREFAVTGLR Sbjct: 59 LDGYIARKNKIVTNLGKLLDPLADKLLVAAVLISLVQMDKLAAWMAIVIISREFAVTGLR 118 Query: 120 QVALLEGKVVAASKWGKIKTVIQIVAISLLLLNNFPFQFVSIPVDDIAIWAAALVTIYSG 179 Q+ALLEG V+AASKWGK KT +QI I LLLNNFPF F+ P DDI W A ++T+YSG Sbjct: 119 QIALLEGSVMAASKWGKWKTAVQITMIISLLLNNFPFTFIDFPFDDIVSWIAVIITVYSG 178 Query: 180 IDYFVKNKDLLELH 193 DYF KNK L+ + Sbjct: 179 FDYFFKNKHLIPVQ 192 >C0ZF17.1 C0ZF17_BREBN Probable CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase EC=2.7.8.5 Length = 191 Score = 228 bits (582), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/191 (62%), Positives = 155/191 (81%), Gaps = 2/191 (1%) Query: 1 VNLPNRITLARICLIPIMMFFLLMNFSFYPEPIHWGSFQLSFNHLIAAVIFLLAASTDGI 60 +NL NRITLARI L+P++MFFLL+ ++ I GS +++N LIAA++F+LAASTDG+ Sbjct: 1 MNLANRITLARIFLVPVVMFFLLVRYNIGTFSI--GSLTMTYNELIAALVFILAASTDGL 58 Query: 61 DGYIARKYNMVTNLGKLLDPLADKLLVSAVLISLVELGRCDSWIAIVIISREFAVTGLRQ 120 DGYIARK +VTNLGK LDPLADKLLVSA LISLVE+ R ++WIAIVIISREFAVTGLR Sbjct: 59 DGYIARKKKIVTNLGKFLDPLADKLLVSAALISLVEMQRLEAWIAIVIISREFAVTGLRL 118 Query: 121 VALLEGKVVAASKWGKIKTVIQIVAISLLLLNNFPFQFVSIPVDDIAIWAAALVTIYSGI 180 VA EG+V+AAS GK+KT +QIVAI+ +++ NFPF F IP D++A WA ++TIYSG Sbjct: 119 VAAAEGQVIAASALGKLKTWVQIVAITAVMIRNFPFGFFGIPFDELATWAMVIITIYSGY 178 Query: 181 DYFVKNKDLLE 191 DYF KN+++++ Sbjct: 179 DYFAKNRNVIQ 189 >C3J7F1.1 C3J7F1_9BACI CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase EC=5.4.3.8 Length = 193 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 115/193 (59%), Positives = 138/193 (71%), Gaps = 12/193 (6%) Query: 1 VNLPNRITLARICLIPIMMFFLLMNFSFYPEPIHWGSFQ-----LSFNHLIAAVIFLLAA 55 VNLPN+IT+ARI LIP + +L+ P WGS Q L HL A+IF++A+ Sbjct: 2 VNLPNKITVARIMLIPFFLIVMLV-------PFGWGSIQIGGTELPVAHLAGALIFIIAS 54 Query: 56 STDGIDGYIARKYNMVTNLGKLLDPLADKLLVSAVLISLVELGRCDSWIAIVIISREFAV 115 +TD IDGY ARKY +VTNLGK LDPLADKLLVSA LI LVELG +W+ IVIISREFAV Sbjct: 55 ATDWIDGYYARKYGLVTNLGKFLDPLADKLLVSAALIVLVELGAVPAWMVIVIISREFAV 114 Query: 116 TGLRQVALLEGKVVAASKWGKIKTVIQIVAISLLLLNNFPFQFVSIPVDDIAIWAAALVT 175 TGLR V EG+VVAA+ GKIKT QIVAIS LLL+NFPF +S P ++A+W A + T Sbjct: 115 TGLRLVLAGEGEVVAANMLGKIKTWTQIVAISALLLHNFPFSLISFPFAELALWVAVIFT 174 Query: 176 IYSGIDYFVKNKD 188 I+SG DYF KN+ Sbjct: 175 IWSGWDYFAKNRH 187 >B7YFQ1.1 B7YFQ1_9BACI CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase EC=5.4.3.8 Length = 193 Score = 212 bits (540), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 115/193 (59%), Positives = 138/193 (71%), Gaps = 12/193 (6%) Query: 1 VNLPNRITLARICLIPIMMFFLLMNFSFYPEPIHWGSFQ-----LSFNHLIAAVIFLLAA 55 VNLPN+IT+ARI LIP + +L+ P WGS Q L HL A+IF++A+ Sbjct: 2 VNLPNKITVARIMLIPFFLIVMLV-------PFGWGSIQIGGTELPVAHLAGALIFIIAS 54 Query: 56 STDGIDGYIARKYNMVTNLGKLLDPLADKLLVSAVLISLVELGRCDSWIAIVIISREFAV 115 +TD IDGY ARKY +VTNLGK LDPLADKLLVSA LI LVELG +W+ IVIISREFAV Sbjct: 55 ATDWIDGYYARKYGLVTNLGKFLDPLADKLLVSAALIVLVELGAVPAWMVIVIISREFAV 114 Query: 116 TGLRQVALLEGKVVAASKWGKIKTVIQIVAISLLLLNNFPFQFVSIPVDDIAIWAAALVT 175 TGLR V EG+VVAA+ GKIKT QIVAIS LLL+NFPF +S P ++A+W A + T Sbjct: 115 TGLRLVLAGEGEVVAANMLGKIKTWTQIVAISALLLHNFPFSLISFPFAELALWVAVIFT 174 Query: 176 IYSGIDYFVKNKD 188 I+SG DYF KN+ Sbjct: 175 IWSGWDYFAKNRH 187 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.329 0.143 0.429 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,074,133,443 Number of extensions: 38244502 Number of successful extensions: 130487 Number of sequences better than 1.0e-05: 1745 Number of HSP's gapped: 128022 Number of HSP's successfully gapped: 1745 Length of query: 195 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 67 Effective length of database: 1,854,806,283 Effective search space: 124272020961 Effective search space used: 124272020961 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 127 (53.5 bits)