BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0280.0006.p (244 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KIK9.1 B3KIK9_9BACI Metallophosphoesterase 423 e-117 B1DLE7.1 B1DLE7_9BACL Metallophosphoesterase 379 e-103 C4L2V1.1 C4L2V1_EXISA Metallophosphoesterase 293 7e-78 C0ZF11.1 C0ZF11_BREBN Putative uncharacterized protein ymdB 293 9e-78 O31775.2 YMDB_BACSU Uncharacterized protein ymdB 292 2e-77 >B3KIK9.1 B3KIK9_9BACI Metallophosphoesterase Length = 267 Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust. Identities = 194/242 (80%), Positives = 218/242 (90%) Query: 2 LPTLKDKYQPHIIIVNGENAAAGRGITSAIANEFFNWGVHGITMGNHTWDNKDIFEFIDD 61 LP LK KY PHIII NGENAA+GRGITSAIANEFFNWG+HGIT+GNHTWDNKDIFEFIDD Sbjct: 25 LPELKSKYNPHIIIANGENAASGRGITSAIANEFFNWGIHGITLGNHTWDNKDIFEFIDD 84 Query: 62 EPRLIRPANFPPGTPGRGYTVIKANGKQLALVNLQGRTFLPAIDDPFRIGEEIAQELRQK 121 EPR++RPANFPPGTPGRGYTVIKANGKQLA+VNLQGRTFLPAID PFR ++I LRQK Sbjct: 85 EPRMVRPANFPPGTPGRGYTVIKANGKQLAIVNLQGRTFLPAIDCPFRAADDIVDTLRQK 144 Query: 122 HKCILVDFHAEATSEKIAMGYYLDGLASIVVGTHTHVQSNDEVILPGGTAYLTDAGMVGS 181 HKCILVDFHAEATSEKIAMG++L+G AS+VVGTHTHVQSND+ ILPGGTAY+TD GMVGS Sbjct: 145 HKCILVDFHAEATSEKIAMGWHLEGRASMVVGTHTHVQSNDDSILPGGTAYITDTGMVGS 204 Query: 182 REGILGMEKDAVLYKFTTQLPARFVVDEGKWQLHGLFAELDEATGKATRVEKIRMREGEW 241 +EGILGM++DAV+YKF TQLPARF VDEGKWQ H + ++DE TGKA +++KIRM E EW Sbjct: 205 KEGILGMQRDAVMYKFKTQLPARFQVDEGKWQFHAVCVDMDEETGKARKIQKIRMYEDEW 264 Query: 242 VM 243 M Sbjct: 265 RM 266 >B1DLE7.1 B1DLE7_9BACL Metallophosphoesterase Length = 265 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 173/243 (71%), Positives = 209/243 (86%) Query: 1 MLPTLKDKYQPHIIIVNGENAAAGRGITSAIANEFFNWGVHGITMGNHTWDNKDIFEFID 60 +LP LK KY PHIIIVNGENAAAGRGIT IA EFF WGVHGITMGNHTWDNKDIFE+ID Sbjct: 21 VLPALKSKYNPHIIIVNGENAAAGRGITQTIAREFFEWGVHGITMGNHTWDNKDIFEWID 80 Query: 61 DEPRLIRPANFPPGTPGRGYTVIKANGKQLALVNLQGRTFLPAIDDPFRIGEEIAQELRQ 120 +EPR++RPANFP GTPG+G+ +IKANGKQLA++NLQGRTFLP ID PFR EE+ + ++ Sbjct: 81 EEPRMVRPANFPEGTPGQGHALIKANGKQLAIINLQGRTFLPPIDCPFRKAEELVAQAKE 140 Query: 121 KHKCILVDFHAEATSEKIAMGYYLDGLASIVVGTHTHVQSNDEVILPGGTAYLTDAGMVG 180 K ILVDFHAEATSEKIAMG++L G ASIVVGTHTHVQ+ND+ +LPGGTAYLTD GM G Sbjct: 141 NTKNILVDFHAEATSEKIAMGWHLAGQASIVVGTHTHVQTNDDRVLPGGTAYLTDVGMTG 200 Query: 181 SREGILGMEKDAVLYKFTTQLPARFVVDEGKWQLHGLFAELDEATGKATRVEKIRMREGE 240 R+G+LGME++AVL+KF TQLP RFVVDEG W LH + ++D+ATG+AT+++KIR+ E + Sbjct: 201 PRDGVLGMERNAVLHKFLTQLPTRFVVDEGDWHLHAVSVQIDDATGQATKIQKIRLTEDD 260 Query: 241 WVM 243 W++ Sbjct: 261 WLL 263 >C4L2V1.1 C4L2V1_EXISA Metallophosphoesterase Length = 264 Score = 293 bits (751), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 135/234 (57%), Positives = 175/234 (74%) Query: 5 LKDKYQPHIIIVNGENAAAGRGITSAIANEFFNWGVHGITMGNHTWDNKDIFEFIDDEPR 64 LKDKY P ++VNGENAA GRG+T I +F G HG+TMGNHTWDN+DIFE+IDD R Sbjct: 25 LKDKYNPTFMLVNGENAANGRGLTKKIYQQFLELGFHGVTMGNHTWDNRDIFEWIDDADR 84 Query: 65 LIRPANFPPGTPGRGYTVIKANGKQLALVNLQGRTFLPAIDDPFRIGEEIAQELRQKHKC 124 ++RPAN+P GTPG G +K NGK+LA++N+ G FLP++D PFR + + +E+R + Sbjct: 85 IVRPANYPDGTPGVGMMKLKQNGKKLAVINVMGNVFLPSLDCPFRTVDRLVEEVRDEVDA 144 Query: 125 ILVDFHAEATSEKIAMGYYLDGLASIVVGTHTHVQSNDEVILPGGTAYLTDAGMVGSREG 184 I VD HAEATSEKIAMGY+LDG A VVGTHTHVQ+ DE +LP GTAY+TD GM G +G Sbjct: 145 IFVDVHAEATSEKIAMGYHLDGRAQAVVGTHTHVQTADERVLPNGTAYITDVGMTGPLDG 204 Query: 185 ILGMEKDAVLYKFTTQLPARFVVDEGKWQLHGLFAELDEATGKATRVEKIRMRE 238 +LGM+ VL KF TQLP RF V EG+ QL+G+F +D+ T +AT++E+I + + Sbjct: 205 VLGMDASVVLKKFMTQLPVRFEVAEGREQLNGVFITIDDQTKRATKIERIHLDD 258 >C0ZF11.1 C0ZF11_BREBN Putative uncharacterized protein ymdB Length = 264 Score = 293 bits (750), Expect = 9e-78, Method: Compositional matrix adjust. Identities = 137/235 (58%), Positives = 171/235 (72%) Query: 2 LPTLKDKYQPHIIIVNGENAAAGRGITSAIANEFFNWGVHGITMGNHTWDNKDIFEFIDD 61 LP LK KY P I+ NGENAA GRGIT I E F WGVH IT+GNHTWD ++IF+FIDD Sbjct: 22 LPLLKRKYNPTFIVANGENAAHGRGITEKITKELFEWGVHAITLGNHTWDQREIFDFIDD 81 Query: 62 EPRLIRPANFPPGTPGRGYTVIKANGKQLALVNLQGRTFLPAIDDPFRIGEEIAQELRQK 121 EPR+IRPANFP G PG+G T IK +LA++NL GRTFLP +D PF++ +++ ++ R++ Sbjct: 82 EPRMIRPANFPEGAPGKGITYIKQPEGELAVINLMGRTFLPPLDCPFQMADKLVEQARKR 141 Query: 122 HKCILVDFHAEATSEKIAMGYYLDGLASIVVGTHTHVQSNDEVILPGGTAYLTDAGMVGS 181 K I VDFHAEATSEK AM +YLDG + VVGTHTHVQ+ DE ILP GT +L D GM G Sbjct: 142 TKLIFVDFHAEATSEKQAMSWYLDGKVTAVVGTHTHVQTADERILPQGTGFLCDVGMCGP 201 Query: 182 REGILGMEKDAVLYKFTTQLPARFVVDEGKWQLHGLFAELDEATGKATRVEKIRM 236 GILGME++AV+ KF TQLP RF V QL+ + LD+ G A ++E+IR+ Sbjct: 202 SNGILGMEREAVIKKFLTQLPVRFEVAPDPAQLNAVLITLDKTNGHAKKMERIRI 256 >O31775.2 YMDB_BACSU Uncharacterized protein ymdB Length = 264 Score = 292 bits (747), Expect = 2e-77, Method: Compositional matrix adjust. Identities = 134/237 (56%), Positives = 175/237 (73%) Query: 2 LPTLKDKYQPHIIIVNGENAAAGRGITSAIANEFFNWGVHGITMGNHTWDNKDIFEFIDD 61 +P LK KY+PH I+NGENAA G+G+T I + G ITMGNHTWD K+IF+FIDD Sbjct: 22 VPKLKTKYKPHFTIINGENAAHGKGLTEKIYHSLIQSGADAITMGNHTWDKKEIFDFIDD 81 Query: 62 EPRLIRPANFPPGTPGRGYTVIKANGKQLALVNLQGRTFLPAIDDPFRIGEEIAQELRQK 121 P L+RPANFP GTPG+G T +KANGK+LA++NLQGRTFLP +DDPF +E+ E ++ Sbjct: 82 VPNLVRPANFPEGTPGKGITYVKANGKELAVINLQGRTFLPPLDDPFLKADELIAEAAKR 141 Query: 122 HKCILVDFHAEATSEKIAMGYYLDGLASIVVGTHTHVQSNDEVILPGGTAYLTDAGMVGS 181 I +DFHAEATSEK+A+G+Y DG AS VVGTHTHVQ+ D ILP GTAY+TD GM G Sbjct: 142 TPYIFIDFHAEATSEKLALGWYTDGRASAVVGTHTHVQTADNRILPKGTAYITDVGMTGP 201 Query: 182 REGILGMEKDAVLYKFTTQLPARFVVDEGKWQLHGLFAELDEATGKATRVEKIRMRE 238 +GILGM+++ ++ +F T LP RF V EGK L G+ ++D+ T KA ++E+I + + Sbjct: 202 YDGILGMDRETIIKRFKTNLPVRFTVAEGKTTLSGVVIDIDDQTKKAVKIERILIND 258 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.138 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,589,230,129 Number of extensions: 69809997 Number of successful extensions: 148307 Number of sequences better than 1.0e-05: 501 Number of HSP's gapped: 147623 Number of HSP's successfully gapped: 501 Length of query: 244 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 112 Effective length of database: 1,817,122,223 Effective search space: 203517688976 Effective search space used: 203517688976 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)