BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0280.0002.p
         (119 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A7FVT5.1 A7FVT5_CLOB1 Putative uncharacterized protein                145   1e-33
A5I436.1 A5I436_CLOBH Putative uncharacterized protein                145   1e-33
B1IHI8.1 B1IHI8_CLOBK Putative uncharacterized protein                143   4e-33
A7GFK9.1 A7GFK9_CLOBL Putative uncharacterized protein                143   4e-33
A7GBU2.1 A7GBU2_CLOBL Putative uncharacterized protein                143   5e-33

>A7FVT5.1 A7FVT5_CLOB1 Putative uncharacterized protein
          Length = 110

 Score =  145 bits (366), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 88/107 (82%), Gaps = 2/107 (1%)

Query: 12  VSSKQAQRHVHEFEGSTKLAEAGADRHNHRFAGVTGQAIRAGNSHVHEIDLNKTDFLNHF 71
            + K+ Q HVHEF GST+LAE   + HNHRFAGV+GQAIR+GNSHVH I  N TDF +HF
Sbjct: 2   CNCKEMQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRSGNSHVHRITTN-TDFFDHF 60

Query: 72  HNLKKIRTGPAIPVGNGKHVHFVTGLTTVNDGHQHQFNFATLIQAPL 118
           H +  + +GPAIPVGNG+HVHFV+G+T+VNDGH+H+F FATLI+AP+
Sbjct: 61  H-MINVLSGPAIPVGNGRHVHFVSGVTSVNDGHRHEFIFATLIEAPI 106


>A5I436.1 A5I436_CLOBH Putative uncharacterized protein
          Length = 110

 Score =  145 bits (366), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/107 (65%), Positives = 88/107 (82%), Gaps = 2/107 (1%)

Query: 12  VSSKQAQRHVHEFEGSTKLAEAGADRHNHRFAGVTGQAIRAGNSHVHEIDLNKTDFLNHF 71
            + K+ Q HVHEF GST+LAE   + HNHRFAGV+GQAIR+GNSHVH I  N TDF +HF
Sbjct: 2   CNCKEMQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRSGNSHVHRITTN-TDFFDHF 60

Query: 72  HNLKKIRTGPAIPVGNGKHVHFVTGLTTVNDGHQHQFNFATLIQAPL 118
           H +  + +GPAIPVGNG+HVHFV+G+T+VNDGH+H+F FATLI+AP+
Sbjct: 61  H-MINVLSGPAIPVGNGRHVHFVSGVTSVNDGHRHEFIFATLIEAPI 106


>B1IHI8.1 B1IHI8_CLOBK Putative uncharacterized protein
          Length = 112

 Score =  143 bits (361), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 88/110 (80%), Gaps = 2/110 (1%)

Query: 9   LKGVSSKQAQRHVHEFEGSTKLAEAGADRHNHRFAGVTGQAIRAGNSHVHEIDLNKTDFL 68
           +     ++ Q HVHEF GST+LAE   + HNHRFAGV+GQAIR+GNSHVH I  N TDF 
Sbjct: 1   MCNCEKRERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRSGNSHVHRITTN-TDFF 59

Query: 69  NHFHNLKKIRTGPAIPVGNGKHVHFVTGLTTVNDGHQHQFNFATLIQAPL 118
           +HFH +  + +GPAIPVGNG+HVHFV+G+T+VNDGH+H+F FATLI+AP+
Sbjct: 60  DHFH-MINVLSGPAIPVGNGRHVHFVSGVTSVNDGHRHEFIFATLIEAPI 108


>A7GFK9.1 A7GFK9_CLOBL Putative uncharacterized protein
          Length = 112

 Score =  143 bits (361), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 69/110 (62%), Positives = 88/110 (80%), Gaps = 2/110 (1%)

Query: 9   LKGVSSKQAQRHVHEFEGSTKLAEAGADRHNHRFAGVTGQAIRAGNSHVHEIDLNKTDFL 68
           +     ++ Q HVHEF GST+LAE   + HNHRFAGV+GQAIR+GNSHVH I  N TDF 
Sbjct: 1   MCNCEKRERQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGQAIRSGNSHVHRITTN-TDFF 59

Query: 69  NHFHNLKKIRTGPAIPVGNGKHVHFVTGLTTVNDGHQHQFNFATLIQAPL 118
           +HFH +  + +GPAIPVGNG+HVHFV+G+T+VNDGH+H+F FATLI+AP+
Sbjct: 60  DHFH-MINVLSGPAIPVGNGRHVHFVSGVTSVNDGHRHEFIFATLIEAPI 108


>A7GBU2.1 A7GBU2_CLOBL Putative uncharacterized protein
          Length = 110

 Score =  143 bits (360), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 69/106 (65%), Positives = 87/106 (82%), Gaps = 2/106 (1%)

Query: 13  SSKQAQRHVHEFEGSTKLAEAGADRHNHRFAGVTGQAIRAGNSHVHEIDLNKTDFLNHFH 72
             ++ Q HVHEF GST+LAE   + HNHRFAGV+G+AIR GNSHVH+I  N TDF +HFH
Sbjct: 3   CCEEKQTHVHEFLGSTRLAEIQTEPHNHRFAGVSGEAIRRGNSHVHKIKTN-TDFFDHFH 61

Query: 73  NLKKIRTGPAIPVGNGKHVHFVTGLTTVNDGHQHQFNFATLIQAPL 118
            +  + TGPAIPVGNG+HVHFV+G+TT+NDGH+H+F FATLI+AP+
Sbjct: 62  -MIDVTTGPAIPVGNGRHVHFVSGVTTLNDGHRHEFIFATLIEAPI 106


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.134    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 714,107,479
Number of extensions: 27476453
Number of successful extensions: 62166
Number of sequences better than 1.0e-05: 49
Number of HSP's gapped: 62089
Number of HSP's successfully gapped: 49
Length of query: 119
Length of database: 3,060,696,203
Length adjustment: 85
Effective length of query: 34
Effective length of database: 2,259,909,928
Effective search space: 76836937552
Effective search space used: 76836937552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)