BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0276.0004.p (156 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6U4.1 B3K6U4_9BACI Carbonic anhydrase 268 2e-70 C0ZC22.1 C0ZC22_BREBN Putative carbonic anhydrase EC=4.2.1.1 214 1e-54 C2VIF7.1 C2VIF7_BACCE Carbonate dehydratase 213 6e-54 C2V235.1 C2V235_BACCE Carbonate dehydratase 213 6e-54 C2U433.1 C2U433_BACCE Carbonate dehydratase 213 6e-54 >B3K6U4.1 B3K6U4_9BACI Carbonic anhydrase Length = 189 Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 125/153 (81%), Positives = 142/153 (92%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 ++IITCMDTRLVELLPKAMNFKNGDVKIIKNAGA+ISQPFGSVMRSVMVALYEL A+EVI Sbjct: 34 LVIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAIISQPFGSVMRSVMVALYELHAEEVI 93 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGHYECGMASLNA+ MI +++RG+SDEVLSTLENSGI+L+KWLRGFDN+ +GV TV Sbjct: 94 VVGHYECGMASLNAEDMIQHMRDRGISDEVLSTLENSGIRLSKWLRGFDNITDGVKNTVS 153 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 LIK HPLLPPNVP+HGM+IDP TGAL+LV +GY Sbjct: 154 LIKNHPLLPPNVPVHGMVIDPNTGALDLVVEGY 186 >C0ZC22.1 C0ZC22_BREBN Putative carbonic anhydrase EC=4.2.1.1 Length = 192 Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 92/153 (60%), Positives = 129/153 (84%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 +++++CMDTRLVELLPKAMN NGD+K +K+AGA++S PFGS+MRS++VA+YEL+A+EV+ Sbjct: 33 LVVLSCMDTRLVELLPKAMNIHNGDIKHVKSAGAIVSHPFGSIMRSILVAIYELNAEEVM 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGHY+CGM+++++ R + + ERGVS + STL+++GI L KWL GFD VEE V +V+ Sbjct: 93 VVGHYDCGMSAIDSKRTMEKMLERGVSAQTFSTLQHAGINLHKWLHGFDRVEESVKNSVD 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 IK HPLLPPNV +HG++IDPATG L++V +GY Sbjct: 153 TIKNHPLLPPNVDVHGLLIDPATGRLDVVVNGY 185 >C2VIF7.1 C2VIF7_BACCE Carbonate dehydratase Length = 187 Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 99/153 (64%), Positives = 124/153 (81%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M+II+CMDTRLVELLPKAMN +NGDVKIIK AGAVIS PFGS+MRS++VA+YEL ADEV Sbjct: 33 MVIISCMDTRLVELLPKAMNMRNGDVKIIKVAGAVISHPFGSIMRSILVAVYELGADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGH++CGMA + A I +KERGV+DE L TL SGI L ++L+GF +VEE V +V Sbjct: 93 VVGHHDCGMAKIQASSTIEKMKERGVTDEKLDTLRYSGIDLERFLQGFSSVEESVEHSVS 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +++ HPLLP VP+HG++IDP TG L+LV +GY Sbjct: 153 ILRNHPLLPEEVPVHGLVIDPDTGKLDLVVNGY 185 >C2V235.1 C2V235_BACCE Carbonate dehydratase Length = 187 Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 99/153 (64%), Positives = 124/153 (81%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M+II+CMDTRLVELLPKAMN +NGDVKIIK AGAVIS PFGS+MRS++VA+YEL ADEV Sbjct: 33 MVIISCMDTRLVELLPKAMNMRNGDVKIIKVAGAVISHPFGSIMRSILVAVYELGADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGH++CGMA + A I +KERGV+DE L TL SGI L ++L+GF +VEE V +V Sbjct: 93 VVGHHDCGMAKIQASSTIEKMKERGVTDEKLDTLRYSGIDLERFLQGFSSVEESVEHSVS 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +++ HPLLP VP+HG++IDP TG L+LV +GY Sbjct: 153 ILRNHPLLPEEVPVHGLVIDPDTGKLDLVVNGY 185 >C2U433.1 C2U433_BACCE Carbonate dehydratase Length = 187 Score = 213 bits (541), Expect = 6e-54, Method: Compositional matrix adjust. Identities = 99/153 (64%), Positives = 124/153 (81%) Query: 1 MLIITCMDTRLVELLPKAMNFKNGDVKIIKNAGAVISQPFGSVMRSVMVALYELDADEVI 60 M+II+CMDTRLVELLPKAMN +NGDVKIIK AGAVIS PFGS+MRS++VA+YEL ADEV Sbjct: 33 MVIISCMDTRLVELLPKAMNMRNGDVKIIKVAGAVISHPFGSIMRSILVAVYELGADEVC 92 Query: 61 VVGHYECGMASLNADRMINSIKERGVSDEVLSTLENSGIKLTKWLRGFDNVEEGVIQTVE 120 VVGH++CGMA + A I +KERGV+DE L TL SGI L ++L+GF +VEE V +V Sbjct: 93 VVGHHDCGMAKIQASSTIEKMKERGVTDEKLDTLRYSGIDLERFLQGFSSVEESVEHSVS 152 Query: 121 LIKRHPLLPPNVPIHGMIIDPATGALELVSDGY 153 +++ HPLLP VP+HG++IDP TG L+LV +GY Sbjct: 153 ILRNHPLLPEEVPVHGLVIDPDTGKLDLVVNGY 185 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 906,922,202 Number of extensions: 34426529 Number of successful extensions: 97901 Number of sequences better than 1.0e-05: 448 Number of HSP's gapped: 97610 Number of HSP's successfully gapped: 448 Length of query: 156 Length of database: 3,060,696,203 Length adjustment: 117 Effective length of query: 39 Effective length of database: 1,958,437,448 Effective search space: 76379060472 Effective search space used: 76379060472 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)