BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0274.0006.p
         (354 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A8S1P1.1 A8S1P1_9CLOT Putative uncharacterized protein                197   2e-48
A7B0C9.1 A7B0C9_RUMGN Putative uncharacterized protein                192   5e-47
C4Z7U3.1 C4Z7U3_9FIRM Glycoside Hydrolase Family 105-like unsatu...   188   7e-46
A8SHU9.1 A8SHU9_9FIRM Putative uncharacterized protein                184   8e-45
C4C738.1 C4C738_9FUSO Predicted unsaturated glucuronyl hydrolase      181   7e-44

>A8S1P1.1 A8S1P1_9CLOT Putative uncharacterized protein
          Length = 379

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 148/312 (47%), Gaps = 8/312 (2%)

Query: 31  IDHWDWVPGVGVISLMEYATASGRGEVLDYLLQWVNRNKRKAEGAKVINALAPFALFPEL 90
           I  WDW  GVG+  L+    A    +  ++L QW   N R+   +K IN   P     EL
Sbjct: 53  IREWDWPQGVGLYGLLRIMQARKNEDYKEFLYQWFKDNIREGLPSKNINTTTPLLTLAEL 112

Query: 91  YRQTGDPWFLQKAMSTADWMLNAAPVTREGALEHTVTENVDF------PEQVWADTVYMA 144
                D  F    +  ADW++N  P TREG  +H  + N D         ++W DT++M 
Sbjct: 113 NEYYHDQEFETLCLKWADWLMNCLPRTREGGFQHVTSANGDRQGVRLNENEMWIDTIFMT 172

Query: 145 VLFLARLGGLTGEPRLADAAVXXXXXXXXXXXDPESGLLYHGWNSRAGNHMSAVHWARAN 204
           VLFL R+G         D +V           D E+GL YHGW     N+   + W R N
Sbjct: 173 VLFLNRMGQKYQNQAWIDESVHQVLMHIKYLCDKETGLFYHGWTFNERNNFGGIFWCRGN 232

Query: 205 AWITLAVPQIVAELREAV--AIPEELYSRYRLLAAGLLSCQAGNGLWHTVLNRPDFVQET 262
           +W TL +   +   R  +   + E +   Y+  A  L   Q  +GLWHTVL   D  +E 
Sbjct: 233 SWFTLGILDYIDMFRGTMNAGVKEFVVDTYKAQAEALKGLQGKSGLWHTVLTDADSYEEV 292

Query: 263 SGSAGIACGFIKGVEQGLLESSYLDGARQTVQGILPLIAENGEVQGVSGGTPVMPSADAY 322
           SGSA I  G +KG+  G+L+ SYL  A + V+ IL  I  +G V  VSGGT +   AD Y
Sbjct: 293 SGSAAITAGILKGIRYGILDDSYLACAWKAVEAILDNIDRDGTVLNVSGGTGMGYDADHY 352

Query: 323 NTIEIYPTLYGQ 334
             I I P  YGQ
Sbjct: 353 KNILIAPMAYGQ 364


>A7B0C9.1 A7B0C9_RUMGN Putative uncharacterized protein
          Length = 379

 Score =  192 bits (487), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/325 (32%), Positives = 155/325 (47%), Gaps = 8/325 (2%)

Query: 31  IDHWDWVPGVGVISLMEYATASGRGEVLDYLLQWVNRNKRKAEGAKVINALAPFALFPEL 90
           I  WDW  GVG+  L++     G  +   +L QW   N      ++ IN   P     EL
Sbjct: 53  IAEWDWPQGVGLYGLLKMMKIQGNDDYKTFLHQWFKGNIADGLPSRNINTTTPLLTLAEL 112

Query: 91  YRQTGDPWFLQKAMSTADWMLNAAPVTREGALEHTVTENVDF------PEQVWADTVYMA 144
             Q  D  F    +  A W++N  P T+EG  +H  + N D         ++W DT++M 
Sbjct: 113 NEQYQDKEFENLCLDWASWLMNCIPRTKEGGFQHVTSANGDRQGVRLNESEMWIDTLFMT 172

Query: 145 VLFLARLGGLTGEPRLADAAVXXXXXXXXXXXDPESGLLYHGWNSRAGNHMSAVHWARAN 204
           VLFL ++G    +    D ++           D  +GL YHGW+    ++   + W R N
Sbjct: 173 VLFLNKMGQKYQKQEWIDESIHQVLMHIKYLYDTHTGLFYHGWSFNRMDNFGGIFWCRGN 232

Query: 205 AWITLAVPQIVAELREAV--AIPEELYSRYRLLAAGLLSCQAGNGLWHTVLNRPDFVQET 262
           +W TL +   V   +  +   +   +   Y+     L   Q+ +GLWHTVL  PD  +E 
Sbjct: 233 SWFTLGILDYVDMFKGTLNAGVKTIIVDTYKAQVRKLKELQSKSGLWHTVLTDPDSYEEV 292

Query: 263 SGSAGIACGFIKGVEQGLLESSYLDGARQTVQGILPLIAENGEVQGVSGGTPVMPSADAY 322
           SGSA I  G +KG++ G+L+ SYL+ A + VQ IL  I ++G V  VSGGT +   AD Y
Sbjct: 293 SGSAAIVAGILKGIKMGILDDSYLECAWKGVQAILKNIDKDGTVLNVSGGTGMGYDADHY 352

Query: 323 NTIEIYPTLYGQGLVLQLFTQAPDL 347
             I I P  YGQ L +    +A  L
Sbjct: 353 KNILIAPMAYGQSLTILALVEALQL 377


>C4Z7U3.1 C4Z7U3_9FIRM Glycoside Hydrolase Family 105-like unsaturated
           rhamnogalacturonyl hydrolase
          Length = 394

 Score =  188 bits (477), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 153/322 (47%), Gaps = 8/322 (2%)

Query: 31  IDHWDWVPGVGVISLMEYATASGRGEVLDYLLQWVNRNKRKAEGAKVINALAPFALFPEL 90
           I  WDW  GVG+  L++    +G  E  ++L +W   N  +   +K IN   P     EL
Sbjct: 65  IKEWDWPQGVGLYGLLKIMQINGNDEYREFLYKWFKENIAEGLPSKNINTTTPLLTLVEL 124

Query: 91  YRQTGDPWFLQKAMSTADWMLNAAPVTREGALEHTVTENVD------FPEQVWADTVYMA 144
                D  F +  +  A+W++N  P T+E   +H  + N D         ++W DT++M 
Sbjct: 125 NNYYNDTQFEELCIKWAEWLMNCLPRTKERGFQHVTSANGDRQGVRLNENEMWIDTLFMT 184

Query: 145 VLFLARLGGLTGEPRLADAAVXXXXXXXXXXXDPESGLLYHGWNSRAGNHMSAVHWARAN 204
           VLFL ++G         + ++           D ++GL YHGW     N+   + W R N
Sbjct: 185 VLFLNKMGQKYNRQDWINESIHQVLMHIKYLCDNKTGLFYHGWTFNEMNNFGGIFWCRGN 244

Query: 205 AWITLAVPQIVAELREAV--AIPEELYSRYRLLAAGLLSCQAGNGLWHTVLNRPDFVQET 262
           +W TL +   V   +  +   + E +   Y+   A L   Q+ +GLWHTVL      +E 
Sbjct: 245 SWFTLGILDYVDMFKGTLNSGVKEIIIDAYKAQTAALKKLQSKSGLWHTVLTDSSSYEEV 304

Query: 263 SGSAGIACGFIKGVEQGLLESSYLDGARQTVQGILPLIAENGEVQGVSGGTPVMPSADAY 322
           SGSA I  G +KG+  G+L+ SY+D A + +  IL  I  +G V  VSGGT +   A+ Y
Sbjct: 305 SGSAAITAGILKGIRMGILDDSYIDVADKAINAILKNIDSDGTVLNVSGGTGMGYDAEHY 364

Query: 323 NTIEIYPTLYGQGLVLQLFTQA 344
             I I P  YGQ L +    +A
Sbjct: 365 KNILIAPMAYGQSLTILALVEA 386


>A8SHU9.1 A8SHU9_9FIRM Putative uncharacterized protein
          Length = 375

 Score =  184 bits (468), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 150/322 (46%), Gaps = 8/322 (2%)

Query: 31  IDHWDWVPGVGVISLMEYATASGRGEVLDYLLQWVNRNKRKAEGAKVINALAPFALFPEL 90
           I  WDW  G+G+  L++ A      E   +L  W   N  +   ++ IN   P     EL
Sbjct: 49  IKEWDWPQGIGLYGLLKIAKMQDSEEYRTFLHDWFKENIAQGLPSRNINTTTPLLTLCEL 108

Query: 91  YRQTGDPWFLQKAMSTADWMLNAAPVTREGALEHTVTENVDF------PEQVWADTVYMA 144
                DP F    +  A W++   P TREG  +H  + N D         ++W DT++M 
Sbjct: 109 NEIYHDPEFEALCLDWAKWLMECIPRTREGGFQHVTSANGDRQGVRLNESEMWIDTLFMT 168

Query: 145 VLFLARLGGLTGEPRLADAAVXXXXXXXXXXXDPESGLLYHGWNSRAGNHMSAVHWARAN 204
           VLFL R+G   G+    D ++           D  +GL +HGW+    ++   V W R N
Sbjct: 169 VLFLNRMGQKYGKQEWIDESIKQVLMHIKYLYDTHTGLFFHGWSFNRMDNFGGVFWCRGN 228

Query: 205 AWITLAVPQIVAELREAV--AIPEELYSRYRLLAAGLLSCQAGNGLWHTVLNRPDFVQET 262
           +W TL +   +   +  +   +   +   Y+     L   Q  +GLWHTVL+     +ET
Sbjct: 229 SWFTLGILDYLDMFKGTLNQGVKTFILDTYKAQVRALRDLQGEDGLWHTVLDDSTSYEET 288

Query: 263 SGSAGIACGFIKGVEQGLLESSYLDGARQTVQGILPLIAENGEVQGVSGGTPVMPSADAY 322
           SGSA I  G +KG+  G+L+ SYL  A++ ++ IL  I  +G V  VSGGT +    D Y
Sbjct: 289 SGSAAITAGILKGIRMGILDDSYLPCAKKAIRAILKNIDTDGTVLKVSGGTSMGYDRDHY 348

Query: 323 NTIEIYPTLYGQGLVLQLFTQA 344
             I I P  YGQ L +    +A
Sbjct: 349 KNILIAPMAYGQSLTILALVEA 370


>C4C738.1 C4C738_9FUSO Predicted unsaturated glucuronyl hydrolase
          Length = 346

 Score =  181 bits (460), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/334 (32%), Positives = 170/334 (50%), Gaps = 8/334 (2%)

Query: 8   AETLDLLF-RYMILEEHKGHWGMDIDHWDWVPGVGVISLMEYATASGRGEVLDYLLQWVN 66
            E L+ L+ R   LEE +G     +  W+W  GVG+ S+ +   A+G    L++L  W  
Sbjct: 4   TEVLNKLYERLTALEEDEGI--TPVYRWEWEQGVGLFSIYKLYEATGDKRCLEFLNGWYE 61

Query: 67  RNKRKAEGAKVINALAPFALFPELYRQTGDPWFLQKAMSTADWMLNAAPVTREGALEHTV 126
           +   K    K IN ++P      LY    +  +L+     A+W++N  P T EG ++H  
Sbjct: 62  KMLGKG-FDKNINTMSPLLALTYLYEAEKNTDYLEVIKENAEWLMNKMPRTVEGGMQHLT 120

Query: 127 TENVDFPEQVWADTVYMAVLFLARLGGLTGEPRLADAAVXXXXXXXXXXXDPESGLLYHG 186
           T  ++  +Q+WADT++M +LFLAR G +    ++ D AV           D ESGL YHG
Sbjct: 121 THTIN-NDQLWADTLFMTILFLARAGMVLNNQKMQDEAVYQTIIHIKYLSDCESGLWYHG 179

Query: 187 WNSRAGNHMSAVHWARANAWITLAVPQIVAELREAVAIPEELYSR-YRLLAAGLLSCQAG 245
           W S    H   + W R N WIT+A+P+I+  + E       L    Y+     L+  Q  
Sbjct: 180 W-SLTERHFGGIFWGRGNCWITIAIPEILTIVEEISMTDRRLLEEAYKRQVGALIKYQDI 238

Query: 246 NGLWHTVLNRPDFVQETSGSAGIACGFIKGVEQGLLESSYLDGARQTVQGILP-LIAENG 304
           +G+W T++N  D   ETS +AG A G + GV+ G ++ S+   +   V+ I+   + E+G
Sbjct: 239 SGMWRTIINDEDSYFETSATAGFAYGILTGVKYGAIDKSHYLNSYMAVRYIVSNYLGEDG 298

Query: 305 EVQGVSGGTPVMPSADAYNTIEIYPTLYGQGLVL 338
            ++ VS GT +   ++ Y  I    T YGQGL++
Sbjct: 299 SLKQVSAGTAMGYDSEHYKNIGFCQTPYGQGLMI 332


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.135    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 2,159,026,397
Number of extensions: 89967386
Number of successful extensions: 195439
Number of sequences better than 1.0e-05: 313
Number of HSP's gapped: 195035
Number of HSP's successfully gapped: 313
Length of query: 354
Length of database: 3,060,696,203
Length adjustment: 137
Effective length of query: 217
Effective length of database: 1,770,017,148
Effective search space: 384093721116
Effective search space used: 384093721116
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 132 (55.5 bits)