BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0274.0004.p (423 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2W6N2.1 C2W6N2_BACCE Putative uncharacterized protein 488 e-136 C3E206.1 C3E206_BACTU Putative uncharacterized protein 485 e-135 C2QAG3.1 C2QAG3_BACCE Putative uncharacterized protein 485 e-135 C2ZN07.1 C2ZN07_BACCE Putative uncharacterized protein 485 e-135 C2Z6C0.1 C2Z6C0_BACCE Putative uncharacterized protein 485 e-135 >C2W6N2.1 C2W6N2_BACCE Putative uncharacterized protein Length = 419 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 235/420 (55%), Positives = 301/420 (71%), Gaps = 1/420 (0%) Query: 1 METVHQKAVIVGVQLQNDKDFAYSMEELRNLAAACELEVVGELSQKSSRINPAHYIGTGK 60 ME + QKA++VGV L N+ DF YSMEEL NLA AC++EVVG ++Q R+NP+HYIG GK Sbjct: 1 MEELVQKAILVGVNLNNESDFEYSMEELTNLAEACDVEVVGRVTQNLHRVNPSHYIGKGK 60 Query: 61 IGXXXXXXXXXXXPIVIFNDELSPSQIRNLESALDRQVIDRTVLILNIFAERAKTKEAQL 120 I +VIFNDELSPSQIRNLE+ LD +VIDRT+LIL+IFA+RAKTKEAQL Sbjct: 61 IEEVSAFVKESDANMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFAQRAKTKEAQL 120 Query: 121 QVEVAQLQYMLPRLAGMRESXXXXXXXXXXXXXXXXETKLELDXXXXXXXXTALQLELXX 180 QVEVA LQYM+PRL G+RES E KLELD L EL Sbjct: 121 QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQIAVLNKELEA 180 Query: 181 XXXXXXXXXXXXXXNEVPVVCLVGYTNTGKSSLMNTIMETYHPGSQKGVLAKDMLFATLE 240 NE+PVV LVGYTN GKS++MNT++E ++ ++K V KDMLFATLE Sbjct: 181 HVAQRQTQRKQRKKNEIPVVSLVGYTNAGKSTIMNTMLEVFNGSTEKQVFEKDMLFATLE 240 Query: 241 TSVRSIELPDRKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVADISDPQVGQ 300 TSVR+IELPD K+FLLTDTVGFVS+LPHHLVKAFRSTLEEV EADLLIHV D ++P Q Sbjct: 241 TSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQ 300 Query: 301 HIAVTEETLKALGADGIPAIKAYNKADLTELPYPVVKENTVTLSAKQKSGIAELIDLVRQ 360 I +T +TLK +G + IP I AYNK+D+ ++ P ++E+ V LSAKQ+ GI EL++++R Sbjct: 301 LIEITNQTLKQIGVENIPTIYAYNKSDMMDVEIPKMQEDRVYLSAKQQIGIEELVEMIRS 360 Query: 361 HVFNDYIRCEILVPFDRGSVVSYFNDHADVQEVSYEEQGTRLKLECRAADYERFKSDFVV 420 H++ +Y +C++L+P+D+G VVSYFNDHA V SYE +GT++ LEC+ +D+E++K FV+ Sbjct: 361 HIYKEYTKCQMLIPYDQGQVVSYFNDHAHVTSTSYENEGTKISLECKTSDFEKYKR-FVI 419 >C3E206.1 C3E206_BACTU Putative uncharacterized protein Length = 419 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 234/415 (56%), Positives = 297/415 (71%) Query: 1 METVHQKAVIVGVQLQNDKDFAYSMEELRNLAAACELEVVGELSQKSSRINPAHYIGTGK 60 ME V Q+AV+VGV + N+ DFAYSMEEL NLA AC++EV+G+++Q R+NP+HYIG GK Sbjct: 1 MEEVLQRAVLVGVNVGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGK 60 Query: 61 IGXXXXXXXXXXXPIVIFNDELSPSQIRNLESALDRQVIDRTVLILNIFAERAKTKEAQL 120 I +VIFNDELSPSQIRNLE LD +VIDRT+LIL+IFA+RAKTKEAQL Sbjct: 61 IEEVAAYVQEIDANMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQL 120 Query: 121 QVEVAQLQYMLPRLAGMRESXXXXXXXXXXXXXXXXETKLELDXXXXXXXXTALQLELXX 180 QVEVA LQYM+PRL G+RES E KLELD + L +L Sbjct: 121 QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKDLEA 180 Query: 181 XXXXXXXXXXXXXXNEVPVVCLVGYTNTGKSSLMNTIMETYHPGSQKGVLAKDMLFATLE 240 NE+PVV LVGYTN GKS+ MN ++E Y+ +K V KDMLFATLE Sbjct: 181 LVAQRQTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE 240 Query: 241 TSVRSIELPDRKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVADISDPQVGQ 300 TSVR+I+LPD K+FLLTDTVGFVS+LPHHLVKAFRSTLEEV EADLLIHV D ++P Q Sbjct: 241 TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQ 300 Query: 301 HIAVTEETLKALGADGIPAIKAYNKADLTELPYPVVKENTVTLSAKQKSGIAELIDLVRQ 360 I +T ETLK +G + IP I AYNK+D+ ++ P V+EN V LSAK+ GI EL++++R Sbjct: 301 LIDITNETLKKIGVENIPTIYAYNKSDMVDVEIPKVQENRVYLSAKKHVGIEELVEMIRS 360 Query: 361 HVFNDYIRCEILVPFDRGSVVSYFNDHADVQEVSYEEQGTRLKLECRAADYERFK 415 H++ +Y +CE+L+P+D+G VVSYFN+HA V SYE +GT+L++EC+ +DYE++K Sbjct: 361 HIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGTKLQIECKTSDYEKYK 415 >C2QAG3.1 C2QAG3_BACCE Putative uncharacterized protein Length = 419 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 234/415 (56%), Positives = 299/415 (72%) Query: 1 METVHQKAVIVGVQLQNDKDFAYSMEELRNLAAACELEVVGELSQKSSRINPAHYIGTGK 60 ME + Q+AV+VGV L N+ DFAYSMEEL NLA AC++EV+G+++Q R+NP+HYIG GK Sbjct: 1 MEELLQRAVLVGVNLGNEDDFAYSMEELTNLAEACDVEVIGQVTQNLQRVNPSHYIGKGK 60 Query: 61 IGXXXXXXXXXXXPIVIFNDELSPSQIRNLESALDRQVIDRTVLILNIFAERAKTKEAQL 120 I +VIFNDELSPSQIRNLE+ LD +VIDRT+LIL+IFA+RAKTKEAQL Sbjct: 61 IEEVAAYVNEVNANMVIFNDELSPSQIRNLEADLDCKVIDRTILILDIFAQRAKTKEAQL 120 Query: 121 QVEVAQLQYMLPRLAGMRESXXXXXXXXXXXXXXXXETKLELDXXXXXXXXTALQLELXX 180 QVEVA LQYM+PRL G+RES E KLELD + L +L Sbjct: 121 QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKDLEA 180 Query: 181 XXXXXXXXXXXXXXNEVPVVCLVGYTNTGKSSLMNTIMETYHPGSQKGVLAKDMLFATLE 240 NEVPVV LVGYTN GKS+ MN ++E Y+ +K V KDMLFATLE Sbjct: 181 LVAQRQTQRKQRKKNEVPVVALVGYTNAGKSTTMNAMLEIYNGTEEKQVFEKDMLFATLE 240 Query: 241 TSVRSIELPDRKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVADISDPQVGQ 300 TSVR+I+LPD K+FLLTDTVGFVS+LPHHLVKAFRSTLEEV EADLLIHV D ++P Q Sbjct: 241 TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYANPNYEQ 300 Query: 301 HIAVTEETLKALGADGIPAIKAYNKADLTELPYPVVKENTVTLSAKQKSGIAELIDLVRQ 360 I +T ETLK +G + IP I AYNK+D+ ++ P V+E+ V LSAK+ +GI EL++++R Sbjct: 301 LIDITNETLKKIGVENIPTIYAYNKSDMVDVEIPKVQEDRVYLSAKKHAGIEELVEMIRS 360 Query: 361 HVFNDYIRCEILVPFDRGSVVSYFNDHADVQEVSYEEQGTRLKLECRAADYERFK 415 H++ +Y +CE+L+P+D+G VVSYFN+HA V SYE +GT+L++EC+ +DYE++K Sbjct: 361 HIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGTKLEVECKTSDYEKYK 415 >C2ZN07.1 C2ZN07_BACCE Putative uncharacterized protein Length = 419 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 236/415 (56%), Positives = 297/415 (71%) Query: 1 METVHQKAVIVGVQLQNDKDFAYSMEELRNLAAACELEVVGELSQKSSRINPAHYIGTGK 60 ME + Q+A++VGV L N+ DFAYSMEEL NL AC++EV+G+++Q R+NP+HYIG GK Sbjct: 1 MEELLQRAILVGVNLGNEADFAYSMEELANLTEACDVEVIGQVTQNLQRVNPSHYIGKGK 60 Query: 61 IGXXXXXXXXXXXPIVIFNDELSPSQIRNLESALDRQVIDRTVLILNIFAERAKTKEAQL 120 I +VIFNDELSPSQIRNLE LD +VIDRT+LIL+IFA+RAKTKEAQL Sbjct: 61 IEEVAAYVKEADANMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQL 120 Query: 121 QVEVAQLQYMLPRLAGMRESXXXXXXXXXXXXXXXXETKLELDXXXXXXXXTALQLELXX 180 QVEVA LQYM+PRL G+RES E KLELD AL EL Sbjct: 121 QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQIAALNKELEA 180 Query: 181 XXXXXXXXXXXXXXNEVPVVCLVGYTNTGKSSLMNTIMETYHPGSQKGVLAKDMLFATLE 240 NE+PVV LVGYTN GKS++MNT++E ++ +K V KDMLFATLE Sbjct: 181 LVAQRQTQRKQRKKNEMPVVSLVGYTNAGKSTIMNTMLEIFNGTVEKQVFEKDMLFATLE 240 Query: 241 TSVRSIELPDRKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVADISDPQVGQ 300 TSVR+I+LPD K+FLLTDTVGFVS+LPHHLVKAFRSTLEEV EADLLIHV D S+P Q Sbjct: 241 TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQ 300 Query: 301 HIAVTEETLKALGADGIPAIKAYNKADLTELPYPVVKENTVTLSAKQKSGIAELIDLVRQ 360 I +T ETLK +G + IP I AYNK+D+ ++ P V+E+ V LSAK+ GI EL++LVR Sbjct: 301 LIDITNETLKKIGVENIPTIYAYNKSDMVDVEIPKVQEDRVYLSAKKHVGIEELVELVRS 360 Query: 361 HVFNDYIRCEILVPFDRGSVVSYFNDHADVQEVSYEEQGTRLKLECRAADYERFK 415 H++ +Y +CE+L+P+D+G VVSYFN+HA V SYE +GT++ LEC+ +DYE++K Sbjct: 361 HIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGTKIALECKTSDYEKYK 415 >C2Z6C0.1 C2Z6C0_BACCE Putative uncharacterized protein Length = 419 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 236/415 (56%), Positives = 297/415 (71%) Query: 1 METVHQKAVIVGVQLQNDKDFAYSMEELRNLAAACELEVVGELSQKSSRINPAHYIGTGK 60 ME + Q+A++VGV L N+ DFAYSMEEL NL AC++EV+G+++Q R+NP+HYIG GK Sbjct: 1 MEELLQRAILVGVNLGNEADFAYSMEELANLTEACDVEVIGQVTQNLQRVNPSHYIGKGK 60 Query: 61 IGXXXXXXXXXXXPIVIFNDELSPSQIRNLESALDRQVIDRTVLILNIFAERAKTKEAQL 120 I +VIFNDELSPSQIRNLE LD +VIDRT+LIL+IFA+RAKTKEAQL Sbjct: 61 IEEVAAYVKEADANMVIFNDELSPSQIRNLEEDLDCKVIDRTILILDIFAQRAKTKEAQL 120 Query: 121 QVEVAQLQYMLPRLAGMRESXXXXXXXXXXXXXXXXETKLELDXXXXXXXXTALQLELXX 180 QVEVA LQYM+PRL G+RES E KLELD AL EL Sbjct: 121 QVEVAHLQYMMPRLIGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQIAALNKELEA 180 Query: 181 XXXXXXXXXXXXXXNEVPVVCLVGYTNTGKSSLMNTIMETYHPGSQKGVLAKDMLFATLE 240 NE+PVV LVGYTN GKS++MNT++E ++ +K V KDMLFATLE Sbjct: 181 LVAQRQTQRKQRKKNEMPVVSLVGYTNAGKSTIMNTMLEIFNGTVEKQVFEKDMLFATLE 240 Query: 241 TSVRSIELPDRKTFLLTDTVGFVSQLPHHLVKAFRSTLEEVTEADLLIHVADISDPQVGQ 300 TSVR+I+LPD K+FLLTDTVGFVS+LPHHLVKAFRSTLEEV EADLLIHV D S+P Q Sbjct: 241 TSVRNIDLPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQ 300 Query: 301 HIAVTEETLKALGADGIPAIKAYNKADLTELPYPVVKENTVTLSAKQKSGIAELIDLVRQ 360 I +T ETLK +G + IP I AYNK+D+ ++ P V+E+ V LSAK+ GI EL++LVR Sbjct: 301 LIDITNETLKKIGVENIPTIYAYNKSDMVDVEIPKVQEDRVYLSAKKHVGIEELVELVRS 360 Query: 361 HVFNDYIRCEILVPFDRGSVVSYFNDHADVQEVSYEEQGTRLKLECRAADYERFK 415 H++ +Y +CE+L+P+D+G VVSYFN+HA V SYE +GT++ LEC+ +DYE++K Sbjct: 361 HIYKEYTKCEMLIPYDQGQVVSYFNNHAHVLSTSYENEGTKIALECKTSDYEKYK 415 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,912,520,188 Number of extensions: 67126618 Number of successful extensions: 248405 Number of sequences better than 1.0e-05: 1581 Number of HSP's gapped: 244599 Number of HSP's successfully gapped: 1670 Length of query: 423 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 285 Effective length of database: 1,760,596,133 Effective search space: 501769897905 Effective search space used: 501769897905 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)