BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0274.0001.p (705 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K400.1 B3K400_9BACI Non-specific serine/threonine protein kina... 970 0.0 B1DET1.1 B1DET1_9BACL Non-specific serine/threonine protein kina... 922 0.0 B1D775.1 B1D775_9BACL Non-specific serine/threonine protein kina... 684 0.0 C0ZCV9.1 C0ZCV9_BREBN Putative uncharacterized protein 662 0.0 B7GMB5.1 B7GMB5_ANOFW SWF/SNF family helicase 650 0.0 >B3K400.1 B3K400_9BACI Non-specific serine/threonine protein kinase EC=2.7.11.1 Length = 986 Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust. Identities = 487/696 (69%), Positives = 547/696 (78%), Gaps = 28/696 (4%) Query: 13 RLCRPPWQVLLPAWWEAASRKKPRLRAKISAGEGSRG----GRSLFGLDALVDFDWRISI 68 RL + W VLLPAWWEAASRKKP+LRAK+ +GEG G SLFGLDALV+FDWRI+I Sbjct: 313 RLLQSGWLVLLPAWWEAASRKKPKLRAKVRSGEGESAERSSGGSLFGLDALVNFDWRIAI 372 Query: 69 GDADLSEAEFAELVARGERLPXXXXQWIPLDPALLAQIQRAMAGMDKSQGLSFQDVLQLH 128 G+A LSEAEFAELVAR ERL QWIPLDPAL+AQI++ MAG+D+ +GLSFQD+L LH Sbjct: 373 GEATLSEAEFAELVARNERLVRFRGQWIPLDPALVAQIRQMMAGVDREEGLSFQDILHLH 432 Query: 129 LLGSSXXXXXXXXXXXXXXXXXRFRLEVELNAHLVKLIGQLGQRDRWPQPAVPAGLHAEL 188 LLG+S R +LEVELN HLVKLIGQLG++ WP VPAGL AEL Sbjct: 433 LLGNSDEGEQVRQDAEEARDPERIKLEVELNEHLVKLIGQLGRQSEWPSLPVPAGLKAEL 492 Query: 189 RSYQQEGFAWLAFLRRFGLGAVLADDMGLGKTVQLIXXXXXXXXXXXXXXXXXXXGRVRQ 248 RSYQ +GFAWLAFLRR+GLGA LADDMGLGKTVQ I Sbjct: 493 RSYQHDGFAWLAFLRRYGLGACLADDMGLGKTVQFIAYLLHVKETTMEREERRL------ 546 Query: 249 TDPPGWPSLIICPTSVLGNWQKELQRFAPSLKVMLHYGSKRLDAGYFYGVASQADVVLTS 308 PSL+ICPTSVLGNWQKEL+RFAPSL+VMLHYG KR + FY A QAD++LTS Sbjct: 547 ------PSLLICPTSVLGNWQKELERFAPSLRVMLHYGGKRSSSEDFYHEAYQADIILTS 600 Query: 309 YATAALDQELLKQFTWAAVCLDEAQNIKNAGTKQSSAVRSFPALHRIALTGTPIENRLSE 368 YATA LDQE+L+ W + +DEAQNIKNA TKQS+AVRSFPA HR+ALTGTPIENRLSE Sbjct: 601 YATATLDQEMLRDMKWETIGIDEAQNIKNADTKQSAAVRSFPARHRVALTGTPIENRLSE 660 Query: 369 LWSIYDFITPGYLGSAKSFQDRFANAIEKERDAKRTADLQKMVKPFMLRRKKKDPAIQLD 428 LWSIYDFI PGYLGS ++F RF AIEK+++ +RT DLQK++KPFMLRRKKKDPAIQLD Sbjct: 661 LWSIYDFINPGYLGSLRAFNLRFIQAIEKDKNEQRTVDLQKLIKPFMLRRKKKDPAIQLD 720 Query: 429 LPDKNEMKTYVHLTAEQAALYDQNVNGLLERMQKLEGIERKGAILAALTSLKQLCDHPLL 488 LPDKNEMKTY+HLTAEQ ALYDQ VN LLERMQKLEGIERKGAILAALT KQLCDHP L Sbjct: 721 LPDKNEMKTYIHLTAEQGALYDQTVNSLLERMQKLEGIERKGAILAALTQFKQLCDHPAL 780 Query: 489 LSKDALPEAESEGR-VDTAALIERSAKLERLLAMVRELREENERCLIFTQYVGMGRMLQA 547 L+K+ LPE G +DT A++ RSAKLERLL+MV+ELR+E ERCLIFTQY+GMG M++ Sbjct: 781 LTKEPLPELPGGGGLLDTEAVVNRSAKLERLLSMVKELRDEGERCLIFTQYIGMGEMMRQ 840 Query: 548 VLSQELQEPVLYLNGSTPKSARDRMIEQFQTXXXXXXXXXXXXXRTQSDQPNVFILSLKA 607 VL QEL EPVLYLNGSTPK RDRMIEQFQ+ +QPNV ILS+KA Sbjct: 841 VLHQELGEPVLYLNGSTPKRTRDRMIEQFQSQTL-----------PPEEQPNVMILSIKA 889 Query: 608 GGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTLEEKIDEML 667 GGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQV+KFIS+GTLEE+IDEML Sbjct: 890 GGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVYKFISMGTLEERIDEML 949 Query: 668 ESKQQLSDDVISSSESWITELSTDALKDLFTLRREW 703 ESKQQLSD VI+SSE WITELSTD LKDLFTLRR+W Sbjct: 950 ESKQQLSDQVIASSEGWITELSTDELKDLFTLRRDW 985 >B1DET1.1 B1DET1_9BACL Non-specific serine/threonine protein kinase EC=2.7.11.1 Length = 1026 Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust. Identities = 467/704 (66%), Positives = 548/704 (77%), Gaps = 37/704 (5%) Query: 13 RLCRPPWQVLLPAWWEAASRKKPRLRAKISAGEG----SRGGRSLFGLDALVDFDWRISI 68 RL WQVLLPAWWE ASRKKPRLRAK+ EG + G RS FGLDAL++FDWR+SI Sbjct: 345 RLLAAGWQVLLPAWWEEASRKKPRLRAKVRPDEGKAERAGGIRSFFGLDALIEFDWRVSI 404 Query: 69 GDADLSEAEFAELVARGERLPXXXXQWIPLDPALLAQIQRAMAGMDKSQGLSFQDVLQLH 128 GD D+SEAEF ELVARGERL QW+PLDPALLAQI++AM G+D +GLSFQDVLQLH Sbjct: 405 GDIDISEAEFQELVARGERLVQFRGQWVPLDPALLAQIRKAMTGVDPRRGLSFQDVLQLH 464 Query: 129 L-------LGSSXXXXXXXXXXXXXXXXXRFRLEVELNAHLVKLIGQLGQRDRWPQPAVP 181 L + ++ L++ELNAHL ++ QL Q+ WP VP Sbjct: 465 LRSNRGFFMPATSGKDAESGGEEDGDNEGELELDLELNAHLTTVMAQLTQQADWPSIPVP 524 Query: 182 AGLHAELRSYQQEGFAWLAFLRRFGLGAVLADDMGLGKTVQLIXXXXXXXXXXXXXXXXX 241 LHAELRSYQQ G++WLAFLRRFGLGAVLADDMGLGKT+Q I Sbjct: 525 TTLHAELRSYQQGGYSWLAFLRRFGLGAVLADDMGLGKTIQFITYLLHIAEEATAKG--- 581 Query: 242 XXGRVRQTDPPGWPSLIICPTSVLGNWQKELQRFAPSLKVMLHYGSKRLDAGYFYGVASQ 301 GR P+L+ICPTSVLGNWQKE++RFAPSL+++LHYGSKRL FY A++ Sbjct: 582 --GRR--------PALLICPTSVLGNWQKEVRRFAPSLRILLHYGSKRLGGDAFYEEAAE 631 Query: 302 ADVVLTSYATAALDQELLKQFTWAAVCLDEAQNIKNAGTKQSSAVRSFPALHRIALTGTP 361 AD+VLTSYAT+ LDQELL +TW+A+CLDEAQNIKNA TKQ+ AV+SFPA HRIALTGTP Sbjct: 632 ADLVLTSYATSTLDQELLGGYTWSAICLDEAQNIKNANTKQAMAVKSFPARHRIALTGTP 691 Query: 362 IENRLSELWSIYDFITPGYLGSAKSFQDRFANAIEKERDAKRTADLQKMVKPFMLRRKKK 421 IEN+L+ELWSIYDF PGYLG+A++F +RF AIE+ERD KRT +LQ++VKPFMLRRKKK Sbjct: 692 IENKLAELWSIYDFTNPGYLGTARAFAERFGQAIERERDEKRTQELQRLVKPFMLRRKKK 751 Query: 422 DPAIQLDLPDKNEMKTYVHLTAEQAALYDQNVNGLLERMQKLEGIERKGAILAALTSLKQ 481 DP I LDLP+KNEMKTY+HLT EQ+ALY+Q V L++ ++KLEGI+RKGAIL+ALT LKQ Sbjct: 752 DPNIMLDLPEKNEMKTYIHLTGEQSALYEQTVKELMDEVKKLEGIQRKGAILSALTRLKQ 811 Query: 482 LCDHPLLLSKDA--LPEAESEGRVDTAALIERSAKLERLLAMVRELREENERCLIFTQYV 539 LC+HP+LL+K+ +PE E E ++A LI RSAKLERLL +V+ELREE ERCLIFTQY+ Sbjct: 812 LCNHPVLLTKEVVPVPEDEREEAAESAMLISRSAKLERLLDLVKELREEGERCLIFTQYI 871 Query: 540 GMGRMLQAVLSQELQEPVLYLNGSTPKSARDRMIEQFQTXXXXXXXXXXXXXRTQSDQPN 599 GMG MLQ VL +EL EPVLYL+G + K+ARDRMIEQFQ+ ++QPN Sbjct: 872 GMGEMLQRVLGRELGEPVLYLHGGSSKTARDRMIEQFQSREL-----------PPAEQPN 920 Query: 600 VFILSLKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTL 659 VFILS+KAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQT+DVQVHKFISLGTL Sbjct: 921 VFILSIKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTRDVQVHKFISLGTL 980 Query: 660 EEKIDEMLESKQQLSDDVISSSESWITELSTDALKDLFTLRREW 703 EE+IDEMLESKQQLSDDVI+SSE WITELSTDAL+DLFTLRR+W Sbjct: 981 EERIDEMLESKQQLSDDVITSSEGWITELSTDALRDLFTLRRDW 1024 >B1D775.1 B1D775_9BACL Non-specific serine/threonine protein kinase EC=2.7.11.1 Length = 965 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 361/704 (51%), Positives = 465/704 (66%), Gaps = 50/704 (7%) Query: 2 FFVIELWKEPIRLCRPPWQVLLPAWWEAASRKKPRLRAKISAGEGSRGGRSLFGLDALVD 61 +F +E K ++L VLLP+WWEA ++ RL+AK+ + GS + +FGLD +V Sbjct: 309 WFFME--KASLQLLEAGCPVLLPSWWEAVRSRRLRLKAKMKSSVGS-DAQPMFGLDQIVQ 365 Query: 62 FDWRISIGDADLSEAEFAELVARGERLPXXXXQWIPLDPALLAQIQRAMAGMDKSQGLSF 121 FDW++++G+ DLSE+EF L RL +W+ LDP +AQI+ + + K +GLSF Sbjct: 366 FDWKMALGNVDLSESEFMRLAEENRRLMNIGGEWVHLDPQDVAQIRDWIKRVGKRKGLSF 425 Query: 122 QDVLQLHLLGSSXXXXXXXXXXXXXXXXXRFRLEVELNAHLVKLIGQLGQRDRWPQPAVP 181 +DV+++HLLG + R EVELN HL + + QL P +P Sbjct: 426 RDVMEMHLLGGTVMEDGDDASIA-------LRAEVELNDHLTRWLEQLQHTAEIPLVDIP 478 Query: 182 AGLHAELRSYQQEGFAWLAFLRRFGLGAVLADDMGLGKTVQLIXXXXXXXXXXXXXXXXX 241 LR YQQ+G +WL FLRRFGLG VLADDMGLGKT+Q + Sbjct: 479 GSFLGSLRPYQQQGVSWLLFLRRFGLGGVLADDMGLGKTIQFMAYLSYV----------- 527 Query: 242 XXGRVRQTDPPGWPSLIICPTSVLGNWQKELQRFAPSLKVMLHYGSKRLDAGYFYGVASQ 301 + ++ G PSL+ICPTSV+GNW+KEL++FAP+L LHYG KR + Sbjct: 528 ---KEHSSNSLG-PSLLICPTSVIGNWEKELEKFAPTLAAYLHYGPKREKGEALQEAVAG 583 Query: 302 ADVVLTSYATAALDQELLKQFTWAAVCLDEAQNIKNAGTKQSSAVRSFPALHRIALTGTP 361 AD+V+TSY+ A +D+E L Q W A+CLDEAQNIKN TKQS+A+R+ PA HRIALTGTP Sbjct: 584 ADIVITSYSLAQIDEEELSQIEWDALCLDEAQNIKNVYTKQSAAIRALPANHRIALTGTP 643 Query: 362 IENRLSELWSIYDFITPGYLGSAKSFQDRFANAIEKERDAKRTADLQKMVKPFMLRRKKK 421 +ENRL+ELWSIYDFI PGYLGS F+ IE+ RD + + LQ+ VKPFMLRR KK Sbjct: 644 MENRLTELWSIYDFINPGYLGSMGEFRKAIVLPIERTRDEQVISGLQRWVKPFMLRRVKK 703 Query: 422 DPAIQLDLPDKNEMKTYVHLTAEQAALYDQNVNGLLERMQKLEGIERKGAILAALTSLKQ 481 DPAIQL LP+KNE KTY+ LT EQ A+Y+ V LLE++ KL ++R+G ILA+LT LKQ Sbjct: 704 DPAIQLSLPEKNEAKTYLTLTTEQGAIYENIVADLLEKLDKLGPMQRRGLILASLTRLKQ 763 Query: 482 LCDHPLLLSKDALPEAESEGRVDTAALIERSAKLERLLAMVRELREENERCLIFTQYVGM 541 LCDHP +L++ E E + + D + RS K+ RLL MV E+ E ERCLIFTQ+V M Sbjct: 764 LCDHPAMLNE----ERELQQQWDES----RSNKVARLLEMVEEIASEGERCLIFTQFVDM 815 Query: 542 GRMLQAVLSQELQEPVLYLNGSTPKSARDRMIEQFQTXXXXXXXXXXXXXRTQSDQPNV- 600 G L+ +L + L PV YL+G PK+ RD MI++FQ ++P Sbjct: 816 GEQLKKLLEERLGLPVPYLHGGVPKAKRDDMIDKFQN----------------PEEPCCA 859 Query: 601 FILSLKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTLE 660 F+LSLKAGG GLNLTAANHVFHFDRWWNPAVENQATDRA+R+GQTK VQVHKFI+LGTLE Sbjct: 860 FVLSLKAGGTGLNLTAANHVFHFDRWWNPAVENQATDRAFRIGQTKQVQVHKFITLGTLE 919 Query: 661 EKIDEMLESKQQLSDDVISSSESWITELSTDALKDLFTLRREWV 704 EKIDEM++ KQQL++ V+ SE WITELSTD LK+LF LR+ W+ Sbjct: 920 EKIDEMIDRKQQLNEQVVGQSEQWITELSTDELKELFALRKNWL 963 >C0ZCV9.1 C0ZCV9_BREBN Putative uncharacterized protein Length = 952 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/700 (50%), Positives = 451/700 (64%), Gaps = 41/700 (5%) Query: 5 IELWKEPIRLCRPPWQVLLPAWWEAASRKKPRLRAKISAGEGSRGGRSLFGLDALVDFDW 64 I L ++L + V LPAWWE R KP+L+AKI+ G+ +S G+ L+DF+W Sbjct: 290 IFLTSSSLQLVQAGIHVFLPAWWEQVRRVKPKLKAKITTSVGA-SRQSFLGVSQLMDFEW 348 Query: 65 RISIGDADLSEAEFAELVARGERLPXXXXQWIPLDPALLAQIQRAMAGMDKSQGLSFQDV 124 ++++G +LSE EF EL+ + +RL W+ L P L Q+Q A+ G+S +DV Sbjct: 349 KLALGPVELSEEEFEELIKQKQRLLKIRGHWVQLTPDLFLQLQEALKKNQAKNGMSLRDV 408 Query: 125 LQLHLLGSSXXXXXXXXXXXXXXXXXRFRLEVELNAHLVKLIGQLGQRDRWPQPAVPAGL 184 +++HL + +EV+LN HL +L+ QL + R P P+ Sbjct: 409 MRMHL---APTVEVEELPDDEFDFDTSLTVEVQLNQHLRELLNQLQETKRIPIMEQPSTF 465 Query: 185 HAELRSYQQEGFAWLAFLRRFGLGAVLADDMGLGKTVQLIXXXXXXXXXXXXXXXXXXXG 244 H LR YQ EG +WL FLRRFGLGA LADDMGLGKTVQ I Sbjct: 466 HGTLRHYQLEGSSWLFFLRRFGLGACLADDMGLGKTVQFITYLL---------------- 509 Query: 245 RVRQTDPPGWPSLIICPTSVLGNWQKELQRFAPSLKVMLHYGSKRLDAGYFYGVASQADV 304 V+Q P PSL+ICPTSV+GNWQKEL+RFAPSL+VM+HYG+ R F AD+ Sbjct: 510 HVKQHGPASTPSLLICPTSVIGNWQKELKRFAPSLQVMIHYGNDRQKKEAFLPAIKGADL 569 Query: 305 VLTSYATAALDQELLKQFTWAAVCLDEAQNIKNAGTKQSSAVRSFPALHRIALTGTPIEN 364 V+TSYA + LD++ L TW +CLDEAQNIKNA TKQ+SAVR A HRIALTGTPIEN Sbjct: 570 VITSYALSHLDEQELGMVTWDTICLDEAQNIKNAYTKQASAVRDLKAWHRIALTGTPIEN 629 Query: 365 RLSELWSIYDFITPGYLGSAKSFQDRFANAIEKERDAKRTADLQKMVKPFMLRRKKKDPA 424 RLSELWSI+DF+ PGYLGS F RF + IE+++D + +Q++++PF+LRR K DP Sbjct: 630 RLSELWSIFDFLNPGYLGSLGEFTQRFVHPIERDQDQQLINQVQRLIQPFLLRRVKTDPN 689 Query: 425 IQLDLPDKNEMKTYVHLTAEQAALYDQNVNGLLERMQKLEGIERKGAILAALTSLKQLCD 484 IQLDLPDKNE K YV LT EQ ALY+ + + +RM+K +ER+G IL LT LKQLCD Sbjct: 690 IQLDLPDKNESKEYVPLTTEQGALYETAIQDMFDRMEKASPMERRGLILTTLTRLKQLCD 749 Query: 485 HPLLLSKDALPEAESEGRVDTAALIERSAKLERLLAMVRELREENERCLIFTQYVGMGRM 544 HP L+ + + T RS KLERLL +V ++R++ ERCLIFTQY+ MG M Sbjct: 750 HPALILNE----------IATTDEAGRSHKLERLLELVDDIRQKKERCLIFTQYIQMGNM 799 Query: 545 LQAVLSQELQEPVLYLNGSTPKSARDRMIEQFQTXXXXXXXXXXXXXRTQSDQPNVFILS 604 LQ VL++E PV +LNG+T K RD MI +FQ ++ +FILS Sbjct: 800 LQRVLTREGYGPVYFLNGATKKEKRDEMIARFQDPTL-----------PDDERGAIFILS 848 Query: 605 LKAGGVGLNLTAANHVFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTLEEKID 664 L+AGG GLNLT ANHV H DRWWNPAVENQATDRA+R+GQ +DV V+KFISLGT+EE+ID Sbjct: 849 LRAGGTGLNLTEANHVIHVDRWWNPAVENQATDRAHRIGQQRDVHVYKFISLGTIEERID 908 Query: 665 EMLESKQQLSDDVISSSESWITELSTDALKDLFTLRREWV 704 EM+E K LS ++ + ESWITELST+ L+DLFTLR +W+ Sbjct: 909 EMMERKLSLSQQIVGTGESWITELSTEELRDLFTLRHDWL 948 >B7GMB5.1 B7GMB5_ANOFW SWF/SNF family helicase Length = 898 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 335/680 (49%), Positives = 435/680 (63%), Gaps = 61/680 (8%) Query: 20 QVLLPAWWEAASRKKPRLRAKISAGEGSRGGRSLFGLDALVDFDWRISIGDADLSEAEFA 79 +V++P WWE + K R++A++ + S+FGLDALVDFDWRI+ +L+E +FA Sbjct: 279 RVIVPEWWEVVKQTKLRVKARVKSS-----ATSVFGLDALVDFDWRIATNGIELTEQQFA 333 Query: 80 ELVARGERLPXXXXQWIPLDPALLAQIQRAMAGMDKSQGLSFQDVLQLHLLGSSXXXXXX 139 ELV + RL QW+ LDPA++ +Q+ M K +GLS +DVL L + Sbjct: 334 ELVEQKRRLVRIRDQWVQLDPAVIQHVQKLMKRA-KQEGLSLRDVLMQTLAEKTNEQHED 392 Query: 140 XXXXXXXXXXXRFRLEVELNAHLVKLIGQLGQRDRWPQPAVPAGLHAELRSYQQEGFAWL 199 +++ELN L+ ++ D P ++P+ H LR YQQ G WL Sbjct: 393 DEA-----------IDIELNRSFATLVRKMKNIDHIPTVSIPSTFHGTLRPYQQRGVDWL 441 Query: 200 AFLRRFGLGAVLADDMGLGKTVQLIXXXXXXXXXXXXXXXXXXXGRVRQTDPPGWPSLII 259 FLR+ G G LADDMGLGKT+Q++ V++ + P+L+I Sbjct: 442 VFLRQLGFGGCLADDMGLGKTIQMLAYL----------------AYVKENEKRNGPALLI 485 Query: 260 CPTSVLGNWQKELQRFAPSLKVMLHYGSKRLDAGYFYGVASQADVVLTSYATAALDQELL 319 CPTSV+GNWQKE Q+F PSL V +H+GS R F A D+V+TSY+ A LD + L Sbjct: 486 CPTSVIGNWQKECQQFVPSLTVYVHHGSNRGHGDTFVEKAKSCDLVITSYSLAHLDFDDL 545 Query: 320 KQFTWAAVCLDEAQNIKNAGTKQSSAVRSFPALHRIALTGTPIENRLSELWSIYDFITPG 379 W +CLDEAQNIKNA TKQ+ A+R H+IALTGTPIENRL+ELWSI+ F+ PG Sbjct: 546 ASIDWDVICLDEAQNIKNAQTKQARAIRKLKGRHKIALTGTPIENRLNELWSIFHFLNPG 605 Query: 380 YLGSAKSFQDRFANAIEKERDAKRTADLQKMVKPFMLRRKKKDPAIQLDLPDKNEMKTYV 439 YLGS FQ RFA IEK DA+ T LQK+++PF+LRR K D I LDLPDK E K Y Sbjct: 606 YLGSQTEFQRRFAAPIEKNGDAQATEKLQKLIRPFLLRRTKTDERIALDLPDKLEQKEYC 665 Query: 440 HLTAEQAALYDQNVNGLLERMQKLEGIERKGAILAALTSLKQLCDHPLLLSKDALPEAES 499 LT EQA+LY+Q V LE++++++G R+G IL L SLKQLC+HP L K+ P+ Sbjct: 666 PLTVEQASLYEQIVQQSLEKLEQVDGFARRGIILQMLNSLKQLCNHPALYLKEKHPK--- 722 Query: 500 EGRVDTAALIERSAKLERLLAMVRELREENERCLIFTQYVGMGRMLQAVLSQELQEPVLY 559 ++ERS K+E+LL +V ++RE E CLIFTQY+ MG M+Q +LS L+E V++ Sbjct: 723 -------QIVERSHKVEKLLELVEQIRENGESCLIFTQYIQMGEMIQHLLSTHLKETVVF 775 Query: 560 LNGSTPKSARDRMIEQFQTXXXXXXXXXXXXXRTQSDQPNVFILSLKAGGVGLNLTAANH 619 LNGSTPK RD MIEQF Q+ Q ++FILSLKAGG GLNLTAANH Sbjct: 776 LNGSTPKQTRDEMIEQF-----------------QNGQFHIFILSLKAGGTGLNLTAANH 818 Query: 620 VFHFDRWWNPAVENQATDRAYRMGQTKDVQVHKFISLGTLEEKIDEMLESKQQLSDDVIS 679 V HFDRWWNPAVENQATDRAYR+GQTK V VHKFI+ GT+EEKID+MLE KQ L++ +I Sbjct: 819 VIHFDRWWNPAVENQATDRAYRIGQTKFVHVHKFITTGTIEEKIDDMLEKKQALNEQLI- 877 Query: 680 SSESWITELSTDALKDLFTL 699 SE+WITELS + L++LFTL Sbjct: 878 QSETWITELSNEQLRELFTL 897 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.135 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,729,031,257 Number of extensions: 140525361 Number of successful extensions: 379196 Number of sequences better than 1.0e-05: 4299 Number of HSP's gapped: 365324 Number of HSP's successfully gapped: 5618 Length of query: 705 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 562 Effective length of database: 1,713,491,058 Effective search space: 962981974596 Effective search space used: 962981974596 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)