BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0273.0013.p (800 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KC24.1 B3KC24_9BACI Putative uncharacterized protein 799 0.0 A3I5H5.1 A3I5H5_9BACI ABC transporter, permease 663 0.0 C3C2H4.1 C3C2H4_BACTU ABC transporter, permease protein 102 1e-19 B3ZA77.1 B3ZA77_BACCE ABC transporter, permease protein 97 6e-18 C2VTV2.1 C2VTV2_BACCE ABC transporter, permease protein 97 7e-18 >B3KC24.1 B3KC24_9BACI Putative uncharacterized protein Length = 790 Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust. Identities = 389/801 (48%), Positives = 527/801 (65%), Gaps = 13/801 (1%) Query: 1 MAAIWSICLGNLRRRKVQXXXXXXXXXXXXXXXXXXITVISNSENLYEDLHRETKGSHEL 60 M AI ++C GN+R+RK+Q TV+ N+EN++E+ H +G+HE+ Sbjct: 1 MRAILTLCWGNIRKRKLQNALIALLIALSALLVGTAFTVLMNTENVFEERHTAAQGAHEI 60 Query: 61 LILTTGLHDPQMVEKWWSAQKGVTASVLLPYKPLAGVIHEGEDIPNLYLYMMNTPDRPFG 120 + +T GLHD +MV WWS Q+GVTAS L+PYKP G+++ G+++PNLYLYM++TP P G Sbjct: 61 INMTRGLHDERMVADWWSTQEGVTASSLIPYKPWTGLVYNGQELPNLYLYMIDTPPMPHG 120 Query: 121 TDELVFAQG-QETGHPEPGTIWIPTSLAYKYDVSVGDELQFKAGKQPLRLKVSAVVIDLA 179 + + G + PE GT+W+PTSLAYKYD+ VGDEL F AG P++ + A+VIDL+ Sbjct: 121 VNHPLPGAGPAQLTVPEAGTVWVPTSLAYKYDMEVGDELVFTAGAAPVQFTIGAIVIDLS 180 Query: 180 LGGPFSTTARIWMNNTDYQHDLNSVQDTDSYLMGIRFDDYSQRAGYWERFESFLGTPFME 239 GGPF+TTARIWMN DY + + + YL+ +R+ Q YW+RFE LG+PF+E Sbjct: 181 HGGPFTTTARIWMNEADYLSTMGGLSTPEQYLVSLRYAHPEQSGEYWQRFEEALGSPFLE 240 Query: 240 ERTTFEEISAFYFIMNKIIGFVMSFLGVVMMLVALYTIGFTISDAILSNYKTIGIYKSLG 299 ER +F E+SAFYFIMNK+IGFVMSFLG+VM+ VAL TIGFTI+D IL+NY+TIGI KS+G Sbjct: 241 ERVSFAELSAFYFIMNKVIGFVMSFLGLVMIAVALLTIGFTITDTILANYRTIGILKSIG 300 Query: 300 LSSREIISTYIAQYSFXXXXXXXXXXXXXRFLSGVIIEQSLSFLKTDHSSTHIQGAGTEF 359 ++S II TY+ QY R LS VII+ +LSFLK++ + +Q G Sbjct: 301 MTSERIIVTYMLQYGLITVIALIPALIGSRLLSDVIIQNALSFLKSEAAPVSVQALGVAI 360 Query: 360 XXXXXXXXXXXXXXXXYANKARSIQPMQAIRYGMSEAAYSRTTKRWHEERKRGKEFERWP 419 YA K R I+P+QAIRYGMSE++++ H + +RW Sbjct: 361 WTGIGMLIIILLCVVLYAAKTRHIEPIQAIRYGMSESSHTHA----HRGGTGTRLLDRWS 416 Query: 420 VPWVIGIRNVTKNLKGSIXXXXXXXXXXXXXXFGLVLLNSIYQMQETSPLWGYDSSDVVI 479 VP VIG ++VT N KG+ FG +L+ S+Y++ ETS WGYD +D+ I Sbjct: 417 VPAVIGWKHVTGNKKGAALIFLLMSITAAVLVFGTLLVTSVYRISETSAQWGYDDADIAI 476 Query: 480 MITNTSEFDREQVENDMGSDARVRNLNWIGYTIGVAPADQTRRSDPADSRAQSVNIPLTV 539 M+ N DR ++++ + D RV +LNW G IGV AD + ++PLTV Sbjct: 477 MVINADGMDRTELQSFIEKDPRVLSLNWSGSAIGVVAQ--------ADGTQPTFSLPLTV 528 Query: 540 VEGSMDEIGLASITGRNPHNRNEISIGINVSRELGKEVGDIVELYIEGEKHSFTVTGIYQ 599 VEGSMDE+GLAS+TGRNP NEI+IG+N++R+L K++GD V +YIEG+ H +TG +Q Sbjct: 529 VEGSMDEMGLASLTGRNPVLPNEIAIGVNIARKLNKDIGDAVTIYIEGKPHQLLITGTFQ 588 Query: 600 SISNMSYQARVTSEVVHKLNRDAGYLNLNNITDSDEIVRELNDKYGTSIQAVKQQTLLDS 659 SISNMS AR+TS++V ++N DAG++ L N DSDE VR+LN +Y IQA+KQ+ LLDS Sbjct: 589 SISNMSNIARITSDLVGEINPDAGFVQLRNQADSDEFVRQLNQRYSPVIQALKQEVLLDS 648 Query: 660 VFKEAAAVLIIPMSILGLMFLLITCLIIYSTSRIHIRKEIKTYGIYKSIGLTSGTIRGAL 719 VFKEAAAVL+IPMS+L L+FL +TCLI+YST R+HIRKE KTYGIY S+GLT+ IR AL Sbjct: 649 VFKEAAAVLLIPMSLLALLFLAVTCLIVYSTCRLHIRKETKTYGIYASLGLTASDIRRAL 708 Query: 720 TWGIVLLSAFGAILGIFCGVYLLPGILRDLLSSYGIIKLPLLMHWTGIXXXXXXXXXXXX 779 T GI L+A G ++G+ CG+Y LP +LR LLS+YGI+KLPL+M W Sbjct: 709 TSGIAGLAALGTLVGMVCGIYALPAVLRGLLSAYGIVKLPLVMEWPLAIGLTLIALAIAV 768 Query: 780 XXCWMASRIIRSNSPRILVTE 800 CW+ASR + S R+LVT+ Sbjct: 769 SGCWLASRALDRTSLRVLVTD 789 >A3I5H5.1 A3I5H5_9BACI ABC transporter, permease Length = 773 Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/770 (43%), Positives = 496/770 (64%), Gaps = 18/770 (2%) Query: 37 ITVISNSENLYEDLHRETKGSHELLILTTGLHDPQMVEKWWSAQKGVTASVLLPYKPLAG 96 +T++ N+ N++E H ++ G+H++L + +H+P V WW Q+GVT+S L+PY+ L+G Sbjct: 16 VTILINTNNIFEKAHFDSNGAHQILTMGDDVHNPFAVNDWWQEQQGVTSSDLIPYRNLSG 75 Query: 97 VIHEGEDIPNLYLYMMNTPDRPFGTDELVFAQGQETGHPEPGTIWIPTSLAYKYDVSVGD 156 + +G+++PNLYL+MM+T P D+L+F++G++ P GTIWIPTSLA +S+GD Sbjct: 76 ITFDGKEMPNLYLFMMDTQKMPSMIDQLLFSEGEKQTSPPKGTIWIPTSLASSAHISLGD 135 Query: 157 ELQFKAGKQPLRLKVSAVVIDLALGGPFSTTARIWMNNTDYQHDLNSVQDTDSYLMGIRF 216 ++F G++ L VS VV+D+ GGPF+T ARIWMNN DYQ L S+ T+ Y+M +RF Sbjct: 136 AIEFNTGERTFSLMVSGVVVDMPYGGPFTTNARIWMNNIDYQLHLASMIGTEQYMMALRF 195 Query: 217 DDYSQRAGYWERFESFLGTPFMEERTTFEEISAFYFIMNKIIGFVMSFLGVVMMLVALYT 276 DDY Q + YW FE++L P++E + +EEI++FY I+NKIIGF+M G+ M+LV+L+ Sbjct: 196 DDYQQSSSYWRDFENYLQGPYLESKMEYEEIASFYLIINKIIGFIMIAFGIAMLLVSLFI 255 Query: 277 IGFTISDAILSNYKTIGIYKSLGLSSREIISTYIAQYSFXXXXXXXXXXXXXRFLSGVII 336 IGF+ISDAIL+NY+TIG+ KSLGLSS +I +TY+ Q+ +FLS +II Sbjct: 256 IGFSISDAILANYRTIGVMKSLGLSSLQISATYVLQFGLLSAFSIIPGLIVSKFLSRIII 315 Query: 337 EQSLSFLKT-DHSSTHIQGAGTEFXXXXXXXXXXXXXXXXYANKARSIQPMQAIRYGMSE 395 E SLS+LK +H + H Q Y+NKAR ++P+QAI+YGMSE Sbjct: 316 ESSLSYLKAGNHLAIH-QDTRLTVLIALILFGIVLLTAFFYSNKARKVEPVQAIKYGMSE 374 Query: 396 AAYSRTTKRWHEERKRGKEFERWPVPWVIGIRNVTKNLKGSIXXXXXXXXXXXXXXFGLV 455 +A S+ +R R P+ IG++++TKNLK SI F +V Sbjct: 375 SANSKINRR-RSSSSRLFRLSNLPIQLQIGLKSITKNLKSSILIIALTSITSAILVFSVV 433 Query: 456 LLNSIYQMQETSPLWGYDSSDVVIMITNTSEFDREQVENDMGSDARVRNLNWIGYTIGVA 515 +LNS ++ETSP WGYD+S VV+ + N F ++Q E+ + D R+++ W+ GV Sbjct: 434 ILNSFISIKETSPSWGYDASHVVVTVFNKETFSKQQFEDFLLEDERIKDYAWLDQLTGVL 493 Query: 516 PADQTRRSDPADSRAQSVNIPLTVVEGSMDEIGLASITGRNPHNRNEISIGINVSRELGK 575 P D +NI + V+EGS D +G ++ GRNP ++NEI+IGINV+R L K Sbjct: 494 PNDNN----------SPLNISVNVIEGSFDAVGYETMFGRNPVSKNEIAIGINVARSLNK 543 Query: 576 EVGDIVELYIEGEKHSFTVTGIYQSISNMSYQARVTSEVVHKLN-----RDAGYLNLNNI 630 +GDIVE+YIEG++H +TGIYQSI+NMS AR++++V+ N + +NL ++ Sbjct: 544 NIGDIVEVYIEGKQHFLIITGIYQSIANMSNSARISADVIKVYNATYSASEISMMNLLDV 603 Query: 631 TDSDEIVRELNDKYGTSIQAVKQQTLLDSVFKEAAAVLIIPMSILGLMFLLITCLIIYST 690 T + +IV +LN + +SI AV QQ LLD+VFKE AVL+IP+SI+G +F+++TC+II+S Sbjct: 604 TSAPQIVEDLNAHFKSSISAVTQQVLLDAVFKEVVAVLVIPLSIVGFLFIIVTCIIIFSV 663 Query: 691 SRIHIRKEIKTYGIYKSIGLTSGTIRGALTWGIVLLSAFGAILGIFCGVYLLPGILRDLL 750 SRI++RKE TYGIYKSIG+TS IR ++T GI++LS FGAI G G+ L+P L ++ Sbjct: 664 SRINVRKESSTYGIYKSIGMTSPNIRWSITSGILILSIFGAIGGFIIGIKLIPLALHSII 723 Query: 751 SSYGIIKLPLLMHWTGIXXXXXXXXXXXXXXCWMASRIIRSNSPRILVTE 800 YG+++LPL+++W W+++++I SPRIL+ E Sbjct: 724 LEYGLLELPLVINWPMSIGISLVSVMAACFGGWVSTKVIAKTSPRILIVE 773 >C3C2H4.1 C3C2H4_BACTU ABC transporter, permease protein Length = 735 Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 142/641 (22%), Positives = 264/641 (41%), Gaps = 65/641 (10%) Query: 129 GQETGHPEPGTIWIPTSLAYKYDVSVGDELQFKAGKQPLRLKVSAVVIDLALGGPFSTTA 188 E G I +P KY++ +GD++ K L +SA V D+ + ++ Sbjct: 84 NNEVVDVRKGEIGVPIYYMQKYNLRIGDKIWVDKNKNELEFTISAFVRDVQMNPSIVSSK 143 Query: 189 RIWMNNTDYQHDLNSVQDTDSYLMGIRFDDYSQRAGYWERFESFLGTPFMEERTTFEEIS 248 R ++N D++ + + ++ YL+ + D ++ + +ES P T+ Sbjct: 144 RFVISNEDFERIKRNFRKSE-YLIEFQLTDVNKINEFQNLYES-SNLPQKGPSITYSLFK 201 Query: 249 AFYFIMNKIIGFVMSFLGVVMMLVALYTIGFTISDAILSNYKTIGIYKSLGLSSREIIST 308 + + II V+ + ++ML+A+ I FTI+ ++ +Y+ IG+ K++G++S++I Sbjct: 202 TLNSLTDGIIAAVLIIISALLMLIAMLCIRFTITTSMEEDYREIGVMKAIGITSKDIQKL 261 Query: 309 YIAQYSFXXXXXXXXXXXXXRFLSGVIIEQ-SLSFLKTDHSSTHIQGAGTEFXXXXXXXX 367 Y+ +Y F++ + +L D S H Sbjct: 262 YVTKYVVISAGGCICGYILSLFVTKIFTSNITLYMGAADKSILH---NVVSLIITTLLFL 318 Query: 368 XXXXXXXXYANKARSIQPMQAIRYGMSEAAYSRTTKRWHEERKRGKEFERWPVPWVIGIR 427 K R I + A++ ++ + + R + K + IGI+ Sbjct: 319 VVILFCRIILRKFRGITAIDALQ-SRNKLGIRKRRNSFSLNRSKSKNINIF-----IGIQ 372 Query: 428 NVTKNLKGSIXXXXXXXXXXXXXXFGLVL-LNSIYQMQETSPLW----GYDSSDVVIMIT 482 +V K K F +V+ +N +Y +Q SP + G SD+ I + Sbjct: 373 DVIKRFK----LYRVLSIVLIIAVFMIVVPVNFLYTIQ--SPKFVNYMGTGKSDIRIDLQ 426 Query: 483 NTSEFDR--EQVENDMGSDARV-RNLNWIGYTIGVAPADQTRRSDPADSRAQSVNIPLTV 539 T ++ + V + + +D V + ++ T + AD T + L V Sbjct: 427 QTENIEKRFKDVISYLQNDDEVEKYATFVTSTFKMVSADGTHEN-------------LHV 473 Query: 540 VEGSMDEIGLASITGRNPHNRNEISIGINVSRELGKEVGDIVELYIEGEKHSFTVTGIYQ 599 G + L + GR P N +EI++ + EL K VGD V L++EG++ + T++GIYQ Sbjct: 474 EVGDFTQFPLDYMQGRAPKNEDEIALSYINANELKKNVGDKVFLFVEGKEKALTISGIYQ 533 Query: 600 SISNMSYQARVT----SEVV--HKLNRDAGYLNLNNITDSDEIVRELNDKYGTSIQAVKQ 653 ++N A+ + E + + +N D L LN E V+E + +S + Sbjct: 534 DVTNGGKTAKASFSYNKENILWYVVNVD---LKLN--VGLQEKVKEYKQNF-SSAKITDT 587 Query: 654 QTLLDSVFKEAAAVLIIPMSILGLMFLLITCLIIYSTSRIHIRKEIKTYGIYKSIGLTSG 713 L E L + + L+ +LI+ LI ++ + K+ I KSIG +S Sbjct: 588 DDYLTQTLGETIKQLRLVTQVAILIAILISVLITAMFFKMLLAKDSFQILIMKSIGFSSK 647 Query: 714 TIR-------------GALTWGIVLLSAFGAILGIFCGVYL 741 IR G +T G VL + FG +L + G ++ Sbjct: 648 DIRIQYVTRSIVIVLIGIVT-GTVLAATFGEMLVSWLGSFM 687 >B3ZA77.1 B3ZA77_BACCE ABC transporter, permease protein Length = 779 Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 131/625 (20%), Positives = 247/625 (39%), Gaps = 55/625 (8%) Query: 129 GQETGHPEPGTIWIPTSLAYKYDVSVGDELQFKAGKQPLRLKVSAVVIDLALGGPFSTTA 188 E G I +P KY++ +GD++ L +SA V D+ + ++ Sbjct: 128 NNEVVDVRKGEIGVPIYYMQKYNLRMGDKIWVIKDNNELEFTISAFVRDVQMNPSIVSSK 187 Query: 189 RIWMNNTDYQHDLNSVQDTDSYLMGIRFDDYSQRAGYWERFESFLGTPFMEERTTFEEIS 248 R ++N D++ + +++ YL+ + D + +E P T+ Sbjct: 188 RFVISNKDFERIKRNFGESE-YLIEFQLTD-ENKINEFENLYKSSNLPQKGPSITYSLFK 245 Query: 249 AFYFIMNKIIGFVMSFLGVVMMLVALYTIGFTISDAILSNYKTIGIYKSLGLSSREIIST 308 + + II V+ + ++ML+A+ I FTI ++ +Y+ IG+ K++G+ +++I Sbjct: 246 TLNSLTDGIIAAVLIIISGLLMLIAMLCIRFTIITSMEEDYREIGVMKAIGIHNKDIQKL 305 Query: 309 YIAQYSFXXXXXXXXXXXXXRFLSGVIIEQSLSFLKTDHSSTHIQGAGTEFXXXXXXXXX 368 YI +Y F F++ + ++ + S I F Sbjct: 306 YIIKYIFISAGGCICGYILSLFVTKIFTSNITLYMGAANKS--ILHNIVPFIITTLLFLV 363 Query: 369 XXXXXXXYANKARSIQPMQAIRYGMSEAAYSRTTKRWHEERKRGKEFERWPVPWVIGIRN 428 R I + A++ + + KR + K+ + V IGI + Sbjct: 364 VILFCRIILRNFRGITAIDALQ------SRDKLGKRKVRKSFSLKQTKFTNVNIFIGIED 417 Query: 429 VTKNLKGSIXXXXXXXXXXXXXXFGLVL-LNSIYQMQETSPL--WGYDSSDVVIMITNTS 485 V K K F +V+ +N +Y +Q + + G SD+ I + T Sbjct: 418 VIKRFK----LYRVLSIVLIIAVFMIVVPVNFLYTIQSPNFVNYMGTGKSDIRIDLQQTE 473 Query: 486 EFDRE------QVENDMGSDARVRNLNWIGYTIGVAPADQTRRSDPADSRAQSVNIPLTV 539 ++ V+ND + + ++ T + AD T + L V Sbjct: 474 NIEKRFKGVISYVKNDQEVE---KYATFVTSTFKMVNADGTHEN-------------LNV 517 Query: 540 VEGSMDEIGLASITGRNPHNRNEISIGINVSRELGKEVGDIVELYIEGEKHSFTVTGIYQ 599 G + L I GR P N NEIS+ + EL K VGD + L+++G++ + T++G+YQ Sbjct: 518 EMGDFTQFPLDYIQGRAPKNENEISLSYMKANELKKNVGDHIVLFVDGKEKTLTISGMYQ 577 Query: 600 SISNMSYQARVTSEVVHKLNRDAGYL------NLNNITDSDEIVRELNDKYGTSIQAVKQ 653 ++N A+ + N + L ++ D E V+E + +S++ Sbjct: 578 DVTNGGKTAKASFS-----NNNENILWYVVNVDMKPKVDLQEKVKEYKQNF-SSVKITDT 631 Query: 654 QTLLDSVFKEAAAVLIIPMSILGLMFLLITCLIIYSTSRIHIRKEIKTYGIYKSIGLTSG 713 + E L + + L+ +LI+ LI ++ + K+ I K+IG +S Sbjct: 632 NNYVTQTLGETIKQLRLVTQVAILIAILISVLITAMFFKMLLAKDSSQILIMKNIGFSSK 691 Query: 714 TIRGALTWGIVLLSAFGAILGIFCG 738 IR + S F +LGI G Sbjct: 692 DIR----IQYITRSIFIVLLGIVIG 712 >C2VTV2.1 C2VTV2_BACCE ABC transporter, permease protein Length = 735 Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 133/627 (21%), Positives = 248/627 (39%), Gaps = 59/627 (9%) Query: 129 GQETGHPEPGTIWIPTSLAYKYDVSVGDELQFKAGKQPLRLKVSAVVIDLALGGPFSTTA 188 E G I +P KY++ +GD++ L +SA V D+ + ++ Sbjct: 84 NNEVVDVRKGEIGVPIYYMQKYNLRMGDKIWVIKDNNELEFTISAFVRDVQMNPSIVSSK 143 Query: 189 RIWMNNTDYQHDLNSVQDTDSYLMGIRFDDYSQRAGYWERFESFLGTPFMEERTTFEEIS 248 R ++N D++ + +++ YL+ + D + +E P T+ Sbjct: 144 RFVISNKDFERIKRNFGESE-YLIEFQLTD-ENKINEFENLYKSSNLPQKGPSITYSLFK 201 Query: 249 AFYFIMNKIIGFVMSFLGVVMMLVALYTIGFTISDAILSNYKTIGIYKSLGLSSREIIST 308 + + II V+ + ++ML+A+ I FTI ++ +Y+ IG+ K++G+ +++I Sbjct: 202 TLNSLTDGIIAAVLIIISGLLMLIAMLCIRFTIITSMEEDYREIGVMKAIGIHNKDIQKL 261 Query: 309 YIAQYSFXXXXXXXXXXXXXRFLSGVIIEQSLSFLKTDHSSTHIQGAGTEFXXXXXXXXX 368 YI +Y F F++ + ++ + S I F Sbjct: 262 YIIKYIFISAGGCICGYILSLFVTKIFTSNITLYMGAANKS--ILHNIVPFIITTLLFLV 319 Query: 369 XXXXXXXYANKARSIQPMQAIRYGMSEAAYSRTTKRWHEERKRGKEFERWPVPWVIGIRN 428 R I + A++ + + KR + K+ + V IGI + Sbjct: 320 VILFCRIILRNFRGITAIDALQ------SRDKLGKRKVRKSFSLKQTKFTNVNIFIGIED 373 Query: 429 VTKNLKGSIXXXXXXXXXXXXXXFGLVL-LNSIYQMQETSPLW----GYDSSDVVIMITN 483 V K K F +V+ +N +Y +Q SP + G SD+ I + Sbjct: 374 VIKRFK----LYRVLSIVLIIAVFMIVVPVNFLYTIQ--SPNFVNYMGTGKSDIRIDLQQ 427 Query: 484 TSEFDRE------QVENDMGSDARVRNLNWIGYTIGVAPADQTRRSDPADSRAQSVNIPL 537 T ++ V+ND + + ++ T + AD T + L Sbjct: 428 TENIEKRFKGVISYVKNDQEVE---KYATFVTSTFKMVNADGTHEN-------------L 471 Query: 538 TVVEGSMDEIGLASITGRNPHNRNEISIGINVSRELGKEVGDIVELYIEGEKHSFTVTGI 597 V G + L I GR P N NEIS+ + EL K VGD + L+++G++ + T++G+ Sbjct: 472 NVEMGDFTQFPLDYIQGRAPKNENEISLSYMNANELKKNVGDHIVLFVDGKEKTLTISGM 531 Query: 598 YQSISNMSYQARVTSEVVHKLNRDAGYL------NLNNITDSDEIVRELNDKYGTSIQAV 651 YQ ++N A+ + N + L ++ D E V+E + +S++ Sbjct: 532 YQDVTNGGKTAKASFS-----NNNENILWYVVNVDMKPKVDLQEKVKEYKQNF-SSVKIT 585 Query: 652 KQQTLLDSVFKEAAAVLIIPMSILGLMFLLITCLIIYSTSRIHIRKEIKTYGIYKSIGLT 711 + E L + + L+ +LI+ LI ++ + K+ I K+IG + Sbjct: 586 DTNNYVTQTLGETIKQLRLVTQVAILIAILISVLITAMFFKMLLAKDSSQILIMKNIGFS 645 Query: 712 SGTIRGALTWGIVLLSAFGAILGIFCG 738 S IR + S F +LGI G Sbjct: 646 SKDIR----IQYITRSIFIVLLGIVIG 668 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,176,217,102 Number of extensions: 166891160 Number of successful extensions: 437751 Number of sequences better than 1.0e-05: 68 Number of HSP's gapped: 437820 Number of HSP's successfully gapped: 112 Length of query: 800 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 656 Effective length of database: 1,704,070,043 Effective search space: 1117869948208 Effective search space used: 1117869948208 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 136 (57.0 bits)