BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0273.0007.p
         (152 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B9E452.1 B9E452_CLOK1 Putative uncharacterized protein                 94   3e-18
A5N081.1 A5N081_CLOK5 Putative uncharacterized protein                 94   3e-18
A6LZV4.1 A6LZV4_CLOB8 FMN-binding domain protein                       69   2e-10
A8F617.1 A8F617_THELT FMN-binding domain protein                       66   9e-10
B9E1U6.1 B9E1U6_CLOK1 Putative uncharacterized protein                 63   1e-08

>B9E452.1 B9E452_CLOK1 Putative uncharacterized protein
          Length = 141

 Score = 94.4 bits (233), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 8/111 (7%)

Query: 40  REVGRLTFGDVDFKKLRNGIYVGQFTGTKDHFRDTKVQVTIRGGQISDIQILKGALDKQG 99
            E   L+   V+F KL +G Y+G++ G    +R  KVQVT+  G+++DI+IL+       
Sbjct: 37  NEAKNLSLDAVNFSKLNDGTYIGEYEGGMYKWRANKVQVTVSSGKVTDIKILEHK----- 91

Query: 100 KPLELKKGQSIADLFDHVIQSQSLQVDVISGATLTSKAHLKALENALKQAQ 150
              E +K +   +L++ VI++QSL VDVISGATLTSKA+LK +ENAL +AQ
Sbjct: 92  ---ENQKPEFTGELYNRVIKAQSLHVDVISGATLTSKAYLKPVENALIKAQ 139


>A5N081.1 A5N081_CLOK5 Putative uncharacterized protein
          Length = 141

 Score = 94.4 bits (233), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 50/111 (45%), Positives = 73/111 (65%), Gaps = 8/111 (7%)

Query: 40  REVGRLTFGDVDFKKLRNGIYVGQFTGTKDHFRDTKVQVTIRGGQISDIQILKGALDKQG 99
            E   L+   V+F KL +G Y+G++ G    +R  KVQVT+  G+++DI+IL+       
Sbjct: 37  NEAKNLSLDAVNFSKLNDGTYIGEYEGGMYKWRANKVQVTVSSGKVTDIKILEHK----- 91

Query: 100 KPLELKKGQSIADLFDHVIQSQSLQVDVISGATLTSKAHLKALENALKQAQ 150
              E +K +   +L++ VI++QSL VDVISGATLTSKA+LK +ENAL +AQ
Sbjct: 92  ---ENQKPEFTGELYNRVIKAQSLHVDVISGATLTSKAYLKPVENALIKAQ 139


>A6LZV4.1 A6LZV4_CLOB8 FMN-binding domain protein
          Length = 134

 Score = 68.6 bits (166), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 14/107 (13%)

Query: 45  LTFGDVDFKKLRNGIYVGQFTGTKD-HFRDTKVQVTIRGGQISDIQILKGALDKQGKPLE 103
           LT  +VD  K+ +G    ++TG+ D +    KV VT++  +I +I +L+   D+ GKP E
Sbjct: 40  LTINNVDLSKIPDG----KYTGSYDVNLISAKVSVTVKNHKIENIDLLEHKTDR-GKPAE 94

Query: 104 LKKGQSIADLFDHVIQSQSLQVDVISGATLTSKAHLKALENALKQAQ 150
           +        +   V+++QSLQVD +SGAT +SK  LKA+ENALK  Q
Sbjct: 95  I--------IPSMVVKAQSLQVDTVSGATNSSKTILKAIENALKPNQ 133


>A8F617.1 A8F617_THELT FMN-binding domain protein
          Length = 134

 Score = 66.2 bits (160), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 71/110 (64%), Gaps = 8/110 (7%)

Query: 38  GRREVGRLTFGDVDFKKLRNGIYVGQFTGTKDHFRDTKVQVTIRGGQISDIQILKGALDK 97
           G  ++ ++   D+D  ++++G Y+GQ+   +  +    V+V + GG+I +I+IL    +K
Sbjct: 29  GMNQIKKIEIKDIDLSQIKDGEYLGQYASGRWQYM---VRVIVSGGEIKNIEIL----NK 81

Query: 98  QGKPLELKKGQSIAD-LFDHVIQSQSLQVDVISGATLTSKAHLKALENAL 146
           +   +++   + + D +   V+++QSL++D ++GAT+++KA LKALENAL
Sbjct: 82  KSGFIDMNAYKQLNDEVISRVLKNQSLRIDAVTGATVSTKALLKALENAL 131


>B9E1U6.1 B9E1U6_CLOK1 Putative uncharacterized protein
          Length = 133

 Score = 62.8 bits (151), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 67/113 (59%), Gaps = 14/113 (12%)

Query: 39  RREVGRLTFGDVDFKKLRNGIYVGQFTGTKDH-FRDTKVQVTIRGGQISDIQILKGALDK 97
           ++ +  L   +VD  K+ +G    ++TG+ D  +   KV VT++  +I DI ++    D+
Sbjct: 34  KKAIRELKISNVDLSKISDG----KYTGSCDVGYLGAKVAVTVKNNKIVDITLISHKNDR 89

Query: 98  QGKPLELKKGQSIADLFDHVIQSQSLQVDVISGATLTSKAHLKALENALKQAQ 150
            GKP E+        + + V+++Q+L+VD ISGAT +SK  LKA+ENAL+  +
Sbjct: 90  -GKPAEV--------IPEKVVKAQNLRVDTISGATNSSKVILKAIENALESGE 133


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.134    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 695,919,459
Number of extensions: 23904609
Number of successful extensions: 59677
Number of sequences better than 1.0e-05: 18
Number of HSP's gapped: 59744
Number of HSP's successfully gapped: 19
Length of query: 152
Length of database: 3,060,696,203
Length adjustment: 114
Effective length of query: 38
Effective length of database: 1,986,700,493
Effective search space: 75494618734
Effective search space used: 75494618734
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 125 (52.8 bits)