BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0273.0006.p (173 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9E451.1 B9E451_CLOK1 Putative uncharacterized protein 243 5e-63 A5N080.1 A5N080_CLOK5 Putative uncharacterized protein 243 5e-63 A8ZNZ3.1 A8ZNZ3_ACAM1 Putative uncharacterized protein 101 3e-20 C4Z0R9.1 C4Z0R9_9FIRM Putative uncharacterized protein 62 1e-08 B1G4A4.1 B1G4A4_9BURK Putative uncharacterized protein 62 2e-08 >B9E451.1 B9E451_CLOK1 Putative uncharacterized protein Length = 188 Score = 243 bits (620), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 107/173 (61%), Positives = 142/173 (82%) Query: 1 MNIAVISYSFTGNNKSLAGSVAKELSAEHIQISEPKTRTMGSIALDMMFSRTPQVQPAPE 60 M +AV+SYS TGNN++LA S+A+EL EH++I E K+RT+ SI LDM+F+RTPQVQP P+ Sbjct: 14 MKVAVVSYSLTGNNEALANSIAEELVVEHMKIKETKSRTINSIVLDMIFNRTPQVQPTPD 73 Query: 61 TMESYDLLLFFGPVWMGHVAAPLRAYLKYLKSHPQRYGFLSISGGADGSNPKLTGDLRKR 120 +E+YDL+LFF P+WMG VA PLRAYLK+LK++P +Y F+SISGGADG+NPKL G+L+KR Sbjct: 74 KLENYDLILFFAPIWMGQVATPLRAYLKHLKTNPCKYAFISISGGADGANPKLAGELKKR 133 Query: 121 AGADPAVLIDLHIADLLPNREKTVRKDTSAYRLNDSDIHTLTHTMMKTIRDVI 173 G +P L+DLHIADLL + K RKDTSAYR+N+ DI LT ++KT+R++I Sbjct: 134 VGKEPDALMDLHIADLLTSDPKPTRKDTSAYRINNGDIRKLTDIIIKTVREMI 186 >A5N080.1 A5N080_CLOK5 Putative uncharacterized protein Length = 188 Score = 243 bits (620), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 107/173 (61%), Positives = 142/173 (82%) Query: 1 MNIAVISYSFTGNNKSLAGSVAKELSAEHIQISEPKTRTMGSIALDMMFSRTPQVQPAPE 60 M +AV+SYS TGNN++LA S+A+EL EH++I E K+RT+ SI LDM+F+RTPQVQP P+ Sbjct: 14 MKVAVVSYSLTGNNEALANSIAEELVVEHMKIKETKSRTINSIVLDMIFNRTPQVQPTPD 73 Query: 61 TMESYDLLLFFGPVWMGHVAAPLRAYLKYLKSHPQRYGFLSISGGADGSNPKLTGDLRKR 120 +E+YDL+LFF P+WMG VA PLRAYLK+LK++P +Y F+SISGGADG+NPKL G+L+KR Sbjct: 74 KLENYDLILFFAPIWMGQVATPLRAYLKHLKTNPCKYAFISISGGADGANPKLAGELKKR 133 Query: 121 AGADPAVLIDLHIADLLPNREKTVRKDTSAYRLNDSDIHTLTHTMMKTIRDVI 173 G +P L+DLHIADLL + K RKDTSAYR+N+ DI LT ++KT+R++I Sbjct: 134 VGKEPDALMDLHIADLLTSDPKPTRKDTSAYRINNGDIRKLTDIIIKTVREMI 186 >A8ZNZ3.1 A8ZNZ3_ACAM1 Putative uncharacterized protein Length = 178 Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 8/176 (4%) Query: 1 MNIAVISYSFTGNNKSLAGSVAKELSAEHIQISEPKTRTMGSIALDMMFSRTPQVQPAPE 60 M I +I +SF+GNN+ LA +AKE+ + I E K RTM +I LDM+F R+P+++ Sbjct: 1 MRILIIYFSFSGNNRRLAEYLAKEIQCDICPIIEKKRRTMLTIVLDMIFKRSPKIEAIET 60 Query: 61 TMESYDLLLFFGPVWMGHVAAPLRAYLKYLKSHPQRYGFLSISG-GADGSNPKLTGDLRK 119 + +YD + P+W +A PL+ +K K+ Y F+S G G ++T L Sbjct: 61 PISNYDHTILVAPIWDSKIANPLKTLIKRKKNSLNNYSFISFCGFDRPGQKERITNQLTD 120 Query: 120 RAGADPAVLIDLHIADLLPNREKTVRKDTSAYRLNDSD-------IHTLTHTMMKT 168 G P + +L + +L P+ + S Y + D I+ H + +T Sbjct: 121 LTGYPPKAVSELKVCELFPSEYRDEVNTISRYHITSKDLFKFEDKIYDFLHLIQRT 176 >C4Z0R9.1 C4Z0R9_9FIRM Putative uncharacterized protein Length = 157 Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 6/113 (5%) Query: 1 MNIAVISYSFTGNNKSLAGSVAKELSAEHIQISEPK------TRTMGSIALDMMFSRTPQ 54 MN AV+ YS +GN K A +A++L A+ +I K R M + F R P+ Sbjct: 1 MNRAVVYYSLSGNTKEAAKVIARKLGAKIFEIDLVKPLPKNTVRQMIVGGMQSTFGRRPK 60 Query: 55 VQPAPETMESYDLLLFFGPVWMGHVAAPLRAYLKYLKSHPQRYGFLSISGGAD 107 ++ P+ ++ YD ++ PVW G A+P+ ++K + + SGG D Sbjct: 61 IKGVPDNIDYYDEIILGMPVWAGMPASPVNTFIKNYGVADKIDAVFTFSGGGD 113 >B1G4A4.1 B1G4A4_9BURK Putative uncharacterized protein Length = 171 Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 4/108 (3%) Query: 2 NIAVISYSFTGNNKSLAGSVAKELSAEHIQISEPKTR--TMGSI--ALDMMFSRTPQVQP 57 + V+ +S TG + LAG++A +SA+ +I + R +G + +D R ++ P Sbjct: 5 RVLVVFFSRTGTTRRLAGALAGMMSADIEEICDFTERRGALGYLRCVIDSWRKRPAEIVP 64 Query: 58 APETMESYDLLLFFGPVWMGHVAAPLRAYLKYLKSHPQRYGFLSISGG 105 A YDL+L PVW G V+AP+RAYL +S + GF I GG Sbjct: 65 AGLDPSQYDLVLVGTPVWAGAVSAPVRAYLLQNRSRFRHVGFFCIFGG 112 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.133 0.384 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,045,874,595 Number of extensions: 41738987 Number of successful extensions: 94153 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 94194 Number of HSP's successfully gapped: 8 Length of query: 173 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 47 Effective length of database: 1,873,648,313 Effective search space: 88061470711 Effective search space used: 88061470711 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)