BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0271.0009.p (264 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KBQ9.1 B3KBQ9_9BACI Phosphate ABC transporter, ATPase subunit 450 e-125 B1D707.1 B1D707_9BACL Phosphate ABC transporter, ATPase subunit 424 e-117 A5ZNC7.1 A5ZNC7_9FIRM Putative uncharacterized protein 366 e-99 B9DRI8.1 B9DRI8_STRU0 Phosphate import ATP-binding protein 3 EC=... 366 1e-99 B1S356.1 B1S356_STRPN Phosphate ABC transporter, ATP-binding pro... 365 2e-99 >B3KBQ9.1 B3KBQ9_9BACI Phosphate ABC transporter, ATPase subunit Length = 251 Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust. Identities = 209/251 (83%), Positives = 234/251 (93%) Query: 14 MKSIIDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGT 73 M+SII I+KL+LYY+++HALK+VDL +PEK VTAFIGPSGCGKSTLLRTLNRMNDMIP T Sbjct: 1 MESIIQIKKLNLYYDTYHALKNVDLDIPEKTVTAFIGPSGCGKSTLLRTLNRMNDMIPST 60 Query: 74 RIEGKVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAEL 133 RIEG V IGG IYS+EV VE+LRKQVGMVFQQPNPFPKSIYDN+AYGPRLHGIR KAEL Sbjct: 61 RIEGSVQIGGTEIYSEEVHVEALRKQVGMVFQQPNPFPKSIYDNIAYGPRLHGIRNKAEL 120 Query: 134 DVLVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDP 193 D +VEQSL+Q+ LW+EVKD+LK+SALSLSGGQQQRLCIARALAVQPDILLMDEATSALDP Sbjct: 121 DQIVEQSLKQAVLWDEVKDYLKRSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDP 180 Query: 194 VSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDS 253 +STLKIEELVQEL+ KYTIVMVTHNMHQAARVSG+TVFFLNG +VE+A+T+ LFS P D+ Sbjct: 181 ISTLKIEELVQELKSKYTIVMVTHNMHQAARVSGQTVFFLNGEVVESANTDTLFSTPSDA 240 Query: 254 RTEDYISGRFG 264 RTEDYISGRFG Sbjct: 241 RTEDYISGRFG 251 >B1D707.1 B1D707_9BACL Phosphate ABC transporter, ATPase subunit Length = 257 Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust. Identities = 197/256 (76%), Positives = 228/256 (89%), Gaps = 2/256 (0%) Query: 11 QKLMKS--IIDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMND 68 Q L+++ +I+I KL+LYY +FHALK V L +PEK +TAFIGPSGCGKSTLLRTLNRMND Sbjct: 2 QTLLQTQPLININKLNLYYGAFHALKDVSLTIPEKAITAFIGPSGCGKSTLLRTLNRMND 61 Query: 69 MIPGTRIEGKVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIR 128 MIPGTRIEG + IGG IYS++V+VE+LRK+VGMVFQQPNPFPKSIYDNVAYGPRLHGI Sbjct: 62 MIPGTRIEGGIAIGGTEIYSNDVDVETLRKKVGMVFQQPNPFPKSIYDNVAYGPRLHGIT 121 Query: 129 GKAELDVLVEQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEAT 188 K +LD +VE SL+ + LW+EVKD+LK+SALSLSGGQQQRLCIARA+AV PD+LLMDEAT Sbjct: 122 NKKQLDEIVETSLKSAVLWDEVKDYLKRSALSLSGGQQQRLCIARAIAVNPDVLLMDEAT 181 Query: 189 SALDPVSTLKIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFS 248 SALDP+STLKIEEL QEL+D+YTIVMVTHNMHQAARVS +TVFFLNG +VE ++TE LFS Sbjct: 182 SALDPISTLKIEELAQELKDRYTIVMVTHNMHQAARVSNQTVFFLNGEVVEFSETEKLFS 241 Query: 249 NPKDSRTEDYISGRFG 264 NP D RTEDYISGRFG Sbjct: 242 NPSDQRTEDYISGRFG 257 >A5ZNC7.1 A5ZNC7_9FIRM Putative uncharacterized protein Length = 252 Score = 366 bits (940), Expect = e-99, Method: Compositional matrix adjust. Identities = 168/247 (68%), Positives = 210/247 (85%), Gaps = 1/247 (0%) Query: 18 IDIEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEG 77 + IE ++L+Y +FHAL +++ +PEK++TAFIGPSGCGKSTLL++LNRMND++ G +I G Sbjct: 7 LSIEDMNLFYGNFHALHDINMHIPEKEITAFIGPSGCGKSTLLKSLNRMNDLVEGCKITG 66 Query: 78 KVNIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELDVLV 137 KV + G++IY D ++V LRK+VGMVFQ+PNPFP SIYDNVAYGPR HGIR KA+LD +V Sbjct: 67 KVELDGEDIYGD-MDVNVLRKRVGMVFQKPNPFPMSIYDNVAYGPRTHGIRSKAKLDEIV 125 Query: 138 EQSLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTL 197 E+SLR +A+W+EVKD LKKSAL +SGGQQQRLCIARALAV+P++LLMDE TSALDP+ST Sbjct: 126 EKSLRDAAIWDEVKDRLKKSALGMSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTS 185 Query: 198 KIEELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSRTED 257 KIEEL EL+ KYTIV+VTHNM QA R+S +T FFL G +VE +DT+ LFS PKD RTED Sbjct: 186 KIEELAMELKGKYTIVIVTHNMQQATRISDKTAFFLLGEVVEFSDTDTLFSMPKDKRTED 245 Query: 258 YISGRFG 264 YI+GRFG Sbjct: 246 YITGRFG 252 >B9DRI8.1 B9DRI8_STRU0 Phosphate import ATP-binding protein 3 EC=3.6.3.27 Length = 250 Score = 366 bits (939), Expect = 1e-99, Method: Compositional matrix adjust. Identities = 164/245 (66%), Positives = 208/245 (84%) Query: 20 IEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGKV 79 ++ LDLYY F ALK+V++++P+ ++TA IGPSGCGKST L+TLNRMND++PG RIEG++ Sbjct: 6 VKNLDLYYGDFKALKNVNIELPQGEITALIGPSGCGKSTFLKTLNRMNDLVPGCRIEGEI 65 Query: 80 NIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELDVLVEQ 139 + G NIY + + SLRK+VGMVFQQPNPF SIYDNVAYGPR HGI+ KA+LD +VE+ Sbjct: 66 LLDGDNIYDKNMNLNSLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIKDKAQLDAIVEK 125 Query: 140 SLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTLKI 199 SL+ +A+W+EVKD LKK+A+SLSGGQQQR+CIARALAV+PD+LLMDE TSALDP+STLKI Sbjct: 126 SLKGAAIWDEVKDDLKKNAMSLSGGQQQRICIARALAVEPDVLLMDEPTSALDPISTLKI 185 Query: 200 EELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSRTEDYI 259 E+LVQ+L+ YTI++VTHNM QA+R+S +T FFL G I E DT +F+NP+D RTEDYI Sbjct: 186 EDLVQKLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVQIFTNPQDKRTEDYI 245 Query: 260 SGRFG 264 SGRFG Sbjct: 246 SGRFG 250 >B1S356.1 B1S356_STRPN Phosphate ABC transporter, ATP-binding protein EC=3.6.3.27 Length = 250 Score = 365 bits (937), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 167/245 (68%), Positives = 204/245 (83%) Query: 20 IEKLDLYYESFHALKSVDLQVPEKQVTAFIGPSGCGKSTLLRTLNRMNDMIPGTRIEGKV 79 + LDL+Y F ALK++ +Q+PE+Q+TA IGPSGCGKST L+TLNRMND++P IEG+V Sbjct: 6 VRHLDLFYGDFQALKNISIQLPERQITALIGPSGCGKSTFLKTLNRMNDLVPSCHIEGQV 65 Query: 80 NIGGKNIYSDEVEVESLRKQVGMVFQQPNPFPKSIYDNVAYGPRLHGIRGKAELDVLVEQ 139 + ++IYS + + LRK+VGMVFQQPNPF SIYDNVAYGPR HGIR K +LD LVE+ Sbjct: 66 LLDEQDIYSSKFNLNQLRKRVGMVFQQPNPFAMSIYDNVAYGPRTHGIRDKKQLDALVEK 125 Query: 140 SLRQSALWEEVKDFLKKSALSLSGGQQQRLCIARALAVQPDILLMDEATSALDPVSTLKI 199 SL+ +A+WEEVKD LKKSA+SLSGGQQQRLCIARALAV+PDILLMDE TSALDP+STLKI Sbjct: 126 SLKGAAIWEEVKDDLKKSAMSLSGGQQQRLCIARALAVEPDILLMDEPTSALDPISTLKI 185 Query: 200 EELVQELRDKYTIVMVTHNMHQAARVSGRTVFFLNGVIVEAADTEMLFSNPKDSRTEDYI 259 E+L+Q+L+ YTI++VTHNM QA+R+S +T FFL G I E DT +F+NPKD RTEDYI Sbjct: 186 EDLIQQLKKDYTIIIVTHNMQQASRISDKTAFFLTGEICEFGDTVDMFTNPKDQRTEDYI 245 Query: 260 SGRFG 264 SGRFG Sbjct: 246 SGRFG 250 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,470,774,720 Number of extensions: 55702443 Number of successful extensions: 534937 Number of sequences better than 1.0e-05: 87748 Number of HSP's gapped: 412234 Number of HSP's successfully gapped: 93092 Length of query: 264 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 131 Effective length of database: 1,807,701,208 Effective search space: 236808858248 Effective search space used: 236808858248 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 130 (54.7 bits)