BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0269.0001.p (360 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9F9B8.1 Q9F9B8_9BACL Xylanase B 476 e-132 Q97TP5.1 Q97TP5_CLOAB Xylanase, glycosyl hydrolase family 10 457 e-127 Q97TI5.1 Q97TI5_CLOAB Xylanase, glycosyl hydrolase family 10 454 e-126 A4UX67.1 A4UX67_9EUKA Putative glycosyl hydrolase family10 362 3e-98 A4UX68.1 A4UX68_9EUKA Putative glycosyl hydrolase family10 349 2e-94 >Q9F9B8.1 Q9F9B8_9BACL Xylanase B Length = 317 Score = 476 bits (1226), Expect = e-132, Method: Compositional matrix adjust. Identities = 228/294 (77%), Positives = 254/294 (86%), Gaps = 2/294 (0%) Query: 23 MAGNASAAITNGSKFLGNIIAGSAPGNFTTYWNQVTPENGTKWGAIEGNRNQMNWGNADM 82 + A A + NGSKFLGNIIAGS P ++ TYWNQVTPEN TKW ++EG+RN MNW + D Sbjct: 24 LVNQADAGLANGSKFLGNIIAGSVPPSYGTYWNQVTPENSTKWESVEGSRNNMNWSH-DT 82 Query: 83 IYNYAISKNIPFKFHTLVWGSQEPNWVAGLSAAEQKAEISSFITQAGQRYSAKSAFVDVV 142 YNYA S PFKFHTLVWG+QEP WV GLSAA+QKAE++ +I AGQRY +AFVDVV Sbjct: 83 AYNYARSNGFPFKFHTLVWGAQEPGWVKGLSAADQKAEVTQWIKAAGQRY-PNAAFVDVV 141 Query: 143 NEPLHAKPSYRNAIGGDGSTGWDWVIWSFQQARAAFPNSKLLINEYGIIGDPSAADKYVT 202 NEPLH KPSYRNAIGGDGSTGWDWVIWSFQQAR AFPN+KL IN+YGII DPS AD+YV Sbjct: 142 NEPLHQKPSYRNAIGGDGSTGWDWVIWSFQQARQAFPNAKLHINDYGIINDPSLADQYVN 201 Query: 203 IINHLKSRGLIDGIGIQCHYFNMDNVSVSTMNTVLNKLAATGLPIYVSELDITGDDNTQL 262 IIN LKSRGLIDGIGIQCH+F+MDNVSV+TMNTVLNKL+ATGLPIYVSELDITGDDNTQL Sbjct: 202 IINQLKSRGLIDGIGIQCHHFSMDNVSVNTMNTVLNKLSATGLPIYVSELDITGDDNTQL 261 Query: 263 ARYQAKFPVLWNHPSVKGVTLWGYIQNQTWAAGTHLVNSNGTERPALKWLKQYL 316 ARY+ KFPVLW +PSVKGVTLWGYIQ QTW GTHL+NSNGTERPAL+WL+QYL Sbjct: 262 ARYKEKFPVLWQNPSVKGVTLWGYIQGQTWKDGTHLLNSNGTERPALQWLRQYL 315 >Q97TP5.1 Q97TP5_CLOAB Xylanase, glycosyl hydrolase family 10 Length = 318 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 218/292 (74%), Positives = 252/292 (86%), Gaps = 2/292 (0%) Query: 25 GNASAAITNGSKFLGNIIAGSAPGNFTTYWNQVTPENGTKWGAIEGNRNQMNWGNADMIY 84 G AA+++ SKF+GNIIAGS P NF TYWNQVTPEN TKWGAIE R NWG+AD+IY Sbjct: 26 GTFKAAMSH-SKFVGNIIAGSIPSNFDTYWNQVTPENATKWGAIEYGRGNYNWGSADLIY 84 Query: 85 NYAISKNIPFKFHTLVWGSQEPNWVAGLSAAEQKAEISSFITQAGQRYSAKSAFVDVVNE 144 NYA SKN+PFKFH LVWGSQ+ W++ LS +QK+E+S +I AGQRYS SAFVDVVNE Sbjct: 85 NYARSKNMPFKFHNLVWGSQQLTWLSNLSPQDQKSEVSKWIAAAGQRYSG-SAFVDVVNE 143 Query: 145 PLHAKPSYRNAIGGDGSTGWDWVIWSFQQARAAFPNSKLLINEYGIIGDPSAADKYVTII 204 PLH +PSY+NA+GGDGSTG+DW++WS+QQAR AFPNSKLLINEYGIIGDP+AA YV II Sbjct: 144 PLHTQPSYKNALGGDGSTGYDWIVWSYQQARKAFPNSKLLINEYGIIGDPNAAANYVKII 203 Query: 205 NHLKSRGLIDGIGIQCHYFNMDNVSVSTMNTVLNKLAATGLPIYVSELDITGDDNTQLAR 264 N LKS+GLIDGIGIQCHYFNMDNVSV TMN VLN L+ TGLPIYVSELD+TGDD+TQLAR Sbjct: 204 NVLKSKGLIDGIGIQCHYFNMDNVSVGTMNYVLNMLSNTGLPIYVSELDMTGDDSTQLAR 263 Query: 265 YQAKFPVLWNHPSVKGVTLWGYIQNQTWAAGTHLVNSNGTERPALKWLKQYL 316 YQ KFPVL+ +P+VKG+TLWGY+Q QTW +GT+LVNSNGTERPALKWL+ YL Sbjct: 264 YQQKFPVLYQNPNVKGITLWGYMQGQTWNSGTYLVNSNGTERPALKWLRSYL 315 >Q97TI5.1 Q97TI5_CLOAB Xylanase, glycosyl hydrolase family 10 Length = 318 Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust. Identities = 213/292 (72%), Positives = 255/292 (87%), Gaps = 2/292 (0%) Query: 25 GNASAAITNGSKFLGNIIAGSAPGNFTTYWNQVTPENGTKWGAIEGNRNQMNWGNADMIY 84 G A AA+++ SKF+GNIIAG+ P NF+ YWNQVTPEN TKWGAIE +R NWG+AD+IY Sbjct: 26 GTAKAAMSH-SKFVGNIIAGNVPNNFSNYWNQVTPENATKWGAIEYSRGNYNWGSADLIY 84 Query: 85 NYAISKNIPFKFHTLVWGSQEPNWVAGLSAAEQKAEISSFITQAGQRYSAKSAFVDVVNE 144 NYA SKN+PFKFH LVWGSQ+PNW++ LS +Q++E+S +I AG+RYS SAFVDVVNE Sbjct: 85 NYARSKNMPFKFHNLVWGSQQPNWMSNLSPQDQRSEVSKWIAAAGKRYSG-SAFVDVVNE 143 Query: 145 PLHAKPSYRNAIGGDGSTGWDWVIWSFQQARAAFPNSKLLINEYGIIGDPSAADKYVTII 204 PLH +PSY+NA+GG GSTG+DW++WS+QQAR AFP+SKLLINEYGIIGDP+AA YV II Sbjct: 144 PLHTQPSYKNALGGSGSTGYDWIVWSYQQARKAFPHSKLLINEYGIIGDPNAAANYVKII 203 Query: 205 NHLKSRGLIDGIGIQCHYFNMDNVSVSTMNTVLNKLAATGLPIYVSELDITGDDNTQLAR 264 N LKS+GLIDGIGIQCHYFNMDNVSV TMN+VL+ L+ TGLPIYVSELD+TG+D TQLAR Sbjct: 204 NVLKSKGLIDGIGIQCHYFNMDNVSVGTMNSVLSTLSKTGLPIYVSELDMTGNDATQLAR 263 Query: 265 YQAKFPVLWNHPSVKGVTLWGYIQNQTWAAGTHLVNSNGTERPALKWLKQYL 316 YQ KFPVL+ +P+VKGVT+WGY+Q QTW +GT+LVNSNGTERPALKWL+ YL Sbjct: 264 YQQKFPVLYQNPNVKGVTIWGYMQGQTWNSGTYLVNSNGTERPALKWLRSYL 315 >A4UX67.1 A4UX67_9EUKA Putative glycosyl hydrolase family10 Length = 305 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 175/286 (61%), Positives = 214/286 (74%), Gaps = 3/286 (1%) Query: 35 SKFLGNIIAGSAPGNFTTYWNQVTPENGTKWGAIEGNRNQMNWGNADMIYNYAISKNIPF 94 SK+LGNIIA S P NF TYWNQVTPENG KWG++EG+R NWG+AD+ YNYA +IPF Sbjct: 18 SKWLGNIIASSVPSNFGTYWNQVTPENGGKWGSVEGSRGNYNWGDADVAYNYAKQNSIPF 77 Query: 95 KFHTLVWGSQEPNWVAGLSAAEQKAEISSFITQAGQRYSAKSAFVDVVNEPLHAKPSYRN 154 K+HT VWGSQEP W++GLSAA+QK I++FI RYS F+DVVNE LHA S RN Sbjct: 78 KYHTFVWGSQEPGWISGLSAADQKTAITNFIAAVAARYSPD--FIDVVNEALHAPSSIRN 135 Query: 155 AIGGDGSTGWDWVIWSFQQARAAFPNSKLLINEYGIIGDPSAADKYVTIINHLKSRGLID 214 AIGG GSTGWDW++W+FQ+AR FP++KLLINEYGII D +A +Y+ II LK +GLID Sbjct: 136 AIGGSGSTGWDWIVWAFQEARNKFPSAKLLINEYGIINDANAIRQYLEIITILKGKGLID 195 Query: 215 GIGIQCHYFNMDNVSVSTMNTVLNKLAATGLPIYVSELDITGDDNT-QLARYQAKFPVLW 273 GIGIQ H FN++++S +T+ T LN L A GLPIYVSELDI + Q YQ FP LW Sbjct: 196 GIGIQGHQFNVNDLSAATITTNLNSLGAAGLPIYVSELDINANSEADQRTIYQRVFPALW 255 Query: 274 NHPSVKGVTLWGYIQNQTWAAGTHLVNSNGTERPALKWLKQYLGGS 319 + +VKG+TLWGYI TW GT +++S+GTER AL WLK+YL S Sbjct: 256 KNTNVKGITLWGYITGSTWKDGTGIISSSGTERLALTWLKEYLASS 301 >A4UX68.1 A4UX68_9EUKA Putative glycosyl hydrolase family10 Length = 304 Score = 349 bits (896), Expect = 2e-94, Method: Compositional matrix adjust. Identities = 170/293 (58%), Positives = 211/293 (72%), Gaps = 7/293 (2%) Query: 28 SAAITNG-SKFLGNIIAGSAPGNFTTYWNQVTPENGTKWGAIEGNRNQMNWGNADMIYNY 86 SA I G SKFLGN+I S P +F YWNQVTPENG KWG+++ ++ NW +AD Y + Sbjct: 12 SAPIAQGKSKFLGNVIGSSVPSSFVNYWNQVTPENGGKWGSVQNSQGSFNWNDADTAYKW 71 Query: 87 AISKNIPFKFHTLVWGSQEPNWVAGLSAAEQKAEISSFITQAGQRYSAKSAFVDVVNEPL 146 A S N FK+HTLVWGSQEP W+ GLS +K ++++I R++A +DVVNE L Sbjct: 72 AKSNNALFKYHTLVWGSQEPGWIGGLSNDAKKQAVTTWINAVASRFTAVD-LIDVVNEAL 130 Query: 147 HAKPSYRNAIGGDGSTGWDWVIWSFQQARAAFPNSKLLINEYGIIGDPSAADKYVTIINH 206 HA SYR A+GG GSTGWDW++W+F QAR+AFP KLLINEYGII D + A +Y+ IIN Sbjct: 131 HAPASYREALGGSGSTGWDWIVWAFTQARSAFPGVKLLINEYGIINDANEARQYIEIINI 190 Query: 207 LKSRGLIDGIGIQCHYFNMDNVSVSTMNTVLNKLAATGLPIYVSELDI---TGDDNTQLA 263 LKSR LIDGIGIQCH FN++ +S ++ TVL+ LAATGL IYVSE D +GDD +++ Sbjct: 191 LKSRNLIDGIGIQCHQFNVNTLSAASAKTVLDLLAATGLSIYVSEFDANGNSGDDQSKI- 249 Query: 264 RYQAKFPVLWNHPSVKGVTLWGYIQNQTWAAGTHLVNSNGTERPALKWLKQYL 316 YQ FP LW H +VKGVTLWGYI QTW GT +V SNG ERPA+ WLKQY+ Sbjct: 250 -YQTIFPALWEHSAVKGVTLWGYITGQTWKDGTGIVESNGQERPAIVWLKQYI 301 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,228,954,479 Number of extensions: 96328409 Number of successful extensions: 157936 Number of sequences better than 1.0e-05: 722 Number of HSP's gapped: 156508 Number of HSP's successfully gapped: 726 Length of query: 360 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 223 Effective length of database: 1,770,017,148 Effective search space: 394713824004 Effective search space used: 394713824004 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 132 (55.5 bits)