BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0266.0007.p (297 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1HNS9.1 A1HNS9_9FIRM Glycosyl transferase, family 2 220 1e-55 Q60B60.1 Q60B60_METCA Glycosyl transferase, group 2 family protein 212 4e-53 C2MTW8.1 C2MTW8_BACCE Glycosyl transferase domain protein 199 2e-49 Q72X17.1 Q72X17_BACC1 Glycosyl transferase domain protein 199 3e-49 Q60B59.1 Q60B59_METCA Glycosyl transferase, group 2 family protein 198 6e-49 >A1HNS9.1 A1HNS9_9FIRM Glycosyl transferase, family 2 Length = 320 Score = 220 bits (560), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 118/286 (41%), Positives = 166/286 (58%), Gaps = 9/286 (3%) Query: 12 LMPVYNMAAYIEEAICSILTQTYSDFELLIIDDGSTDGTLDIIRKFDDTRIKVIAHAVNQ 71 ++PVYN Y+ AI SIL QT++DFE +IIDDGS+D +L II ++D RI +I H N Sbjct: 24 ILPVYNCQDYLHRAIDSILGQTFTDFEFIIIDDGSSDNSLKIIEAYNDARIVLIRHEKNM 83 Query: 72 GLIATLNQGIDCCRGEYIARMDGDDIALPHRFQRQVEFMDTHPDYGVCGSQVYLLGK--D 129 GL+A+LN+GID +G YIA M GD I+ P R RQVEFMD HP+ VCGS V G+ Sbjct: 84 GLVASLNKGIDAAQGTYIAVMHGDGISKPERLARQVEFMDCHPNIAVCGSWVETFGECAK 143 Query: 130 SVTTKPVHHEEILCWQLLHCTIVHPTIMIRSSVLVNHGIRYLD-YPHAEDYEIWNRLGAA 188 +V P+ C L I HP++++R ++L++ G+RYLD YPHAEDY +W + Sbjct: 144 TVWGYPIDPGLAKCSLLFRNIIAHPSVLMRRNILISEGMRYLDLYPHAEDYALWVTIAKK 203 Query: 189 TKLMNLPEVLLMYRVHPGQISNTQQQVQLVQSERIRRDQLRLLGIEPTAEEYQTHLDFCH 248 + NLP+VLL +R I++ +Q QL + +I+ +Q+ LGI PT +EY H Sbjct: 204 YDITNLPQVLLKHR-----ITSKFKQQQLAATAKIQLEQINALGITPTEQEYSLHQAISL 258 Query: 249 FRIRVHEPAHYYQCLAWAHKLLEGNLRTQRYHHETLNSVLSQCFSL 294 + + A + L W KL NL Y VL Q ++ Sbjct: 259 GKFPKSD-AFFEAVLLWFTKLKHANLTRGYYPEPAFTYVLRQYLAV 303 >Q60B60.1 Q60B60_METCA Glycosyl transferase, group 2 family protein Length = 367 Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 107/238 (44%), Positives = 150/238 (63%), Gaps = 3/238 (1%) Query: 12 LMPVYNMAAYIEEAICSILTQTYSDFELLIIDDGSTDGTLDIIRKFDDTRIKVIAHAVNQ 71 LMPVYN Y+ A+ SIL QT+ DF LLIIDDGS+D +L I R F D R++V + N Sbjct: 35 LMPVYNGEKYLAAAMESILDQTFRDFILLIIDDGSSDSSLAIARSFGDPRVQVERNPKNL 94 Query: 72 GLIATLNQGIDCCRGEYIARMDGDDIALPHRFQRQVEFMDTHPDYGVCGSQVYLLGKDSV 131 GL+ TLN+G+D + E++ARMD DDIALP R ++Q+ F+D +PD G+CG+ L + Sbjct: 95 GLVKTLNRGLDLVQTEFVARMDCDDIALPDRLEKQIAFLDENPDIGMCGTAYELFHESLR 154 Query: 132 TT--KPVHHEEILCWQLLHCTIVHPTIMIRSSVLVNHGIRYL-DYPHAEDYEIWNRLGAA 188 T P HEEI+ L +H ++++R VL HG+RY DY AEDYE+W RL Sbjct: 155 QTIRPPCRHEEIVYGLLDDNVFLHSSVIVRMEVLNRHGLRYREDYRLAEDYELWARLARY 214 Query: 189 TKLMNLPEVLLMYRVHPGQISNTQQQVQLVQSERIRRDQLRLLGIEPTAEEYQTHLDF 246 T + NLP+VL+ YR HP +SNT + Q+ +R+R + L G+ P A++ H+D Sbjct: 215 THIGNLPQVLVRYRSHPENVSNTNKGEQIATRDRVRLEHLESFGLAPAADQKTLHIDL 272 >C2MTW8.1 C2MTW8_BACCE Glycosyl transferase domain protein Length = 321 Score = 199 bits (506), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 105/254 (41%), Positives = 157/254 (61%), Gaps = 8/254 (3%) Query: 12 LMPVYNMAAYIEEAICSILTQTYSDFELLIIDDGSTDGTLDIIRKFDDTRIKVIAHAVNQ 71 LMPVYN Y+ E++ SIL QT++DFELLII+DGSTD +++I+ + D+RI+++ + VN Sbjct: 7 LMPVYNGEKYLRESVDSILNQTFTDFELLIINDGSTDSSMEILNSYSDSRIRIVTNEVNL 66 Query: 72 GLIATLNQGIDCCRGEYIARMDGDDIALPHRFQRQVEFMDTHPDYGVCGSQVYLLGKDSV 131 LI TLN+GID GEYIARMD DDIA P R + Q+++M+ HPD VCG+ V ++G++ Sbjct: 67 RLIKTLNKGIDLATGEYIARMDCDDIADPKRLEIQLQYMEKHPDVAVCGTGVKVIGQNRK 126 Query: 132 TTKPVHHEEIL--CWQLLHCTIVHPTIMIRSSVLVNHGIRY-LDYPHAEDYEIWNRLGAA 188 + E++ C + C ++HP++M+R+ L H I Y L+Y HAEDYE++ RL Sbjct: 127 PWQISGSSELIRNCLYVRSC-MIHPSVMMRTEFLKEHNIYYDLNYLHAEDYELFQRLSEK 185 Query: 189 TKLMNLPEVLLMYRVHPGQISNTQQQVQLVQSERIRRDQLRLLGIE----PTAEEYQTHL 244 K++NL E LL YR +S+ Q V + +I + L +GIE P A T Sbjct: 186 YKVINLEEPLLNYRWSETSVSSLNASDQEVMAAKISTEALSRIGIEFNRVPFARGTLTKE 245 Query: 245 DFCHFRIRVHEPAH 258 + + ++ E H Sbjct: 246 ELLEVKRQLEEQYH 259 >Q72X17.1 Q72X17_BACC1 Glycosyl transferase domain protein Length = 321 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 105/254 (41%), Positives = 157/254 (61%), Gaps = 8/254 (3%) Query: 12 LMPVYNMAAYIEEAICSILTQTYSDFELLIIDDGSTDGTLDIIRKFDDTRIKVIAHAVNQ 71 LMPVYN Y+ E++ SIL QT++DFELLII+DGSTD +++I+ + D+RI+++ + VN Sbjct: 7 LMPVYNGEKYLRESVDSILNQTFTDFELLIINDGSTDSSMEILNSYSDSRIRIVTNEVNL 66 Query: 72 GLIATLNQGIDCCRGEYIARMDGDDIALPHRFQRQVEFMDTHPDYGVCGSQVYLLGKDSV 131 LI TLN+GID GEYIARMD DDIA P R + Q+++M+ HPD VCG+ V ++G++ Sbjct: 67 RLIKTLNKGIDLATGEYIARMDCDDIADPKRLEIQLQYMEKHPDVAVCGTGVKVIGQNRK 126 Query: 132 TTKPVHHEEIL--CWQLLHCTIVHPTIMIRSSVLVNHGIRY-LDYPHAEDYEIWNRLGAA 188 + E++ C + C ++HP++M+R+ L H I Y L+Y HAEDYE++ RL Sbjct: 127 PWQISGSSELIRNCLYVRSC-MIHPSVMMRTEFLKEHNIYYDLNYLHAEDYELFQRLSEK 185 Query: 189 TKLMNLPEVLLMYRVHPGQISNTQQQVQLVQSERIRRDQLRLLGIE----PTAEEYQTHL 244 K++NL E LL YR +S+ Q V + +I + L +GIE P A T Sbjct: 186 YKVINLEEPLLNYRWSETSVSSLNASDQEVMAAKISTEALSRIGIEFNRVPFARGTLTKE 245 Query: 245 DFCHFRIRVHEPAH 258 + + ++ E H Sbjct: 246 ELLEVKRQLEEQYH 259 >Q60B59.1 Q60B59_METCA Glycosyl transferase, group 2 family protein Length = 341 Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 100/243 (41%), Positives = 142/243 (58%), Gaps = 3/243 (1%) Query: 12 LMPVYNMAAYIEEAICSILTQTYSDFELLIIDDGSTDGTLDIIRKFDDTRIKVIAHAVNQ 71 L+PVYN Y+ EA+ S+LTQTY +F LL +DDGSTD +L+I+R D R+ V + N+ Sbjct: 13 LLPVYNGEQYLREALDSLLTQTYRNFSLLAVDDGSTDSSLEILRSIKDPRLSVKVNPRNR 72 Query: 72 GLIATLNQGIDCCRGEYIARMDGDDIALPHRFQRQVEFMDTHPDYGVCGS--QVYLLGKD 129 GLI TLN+ +D + EY+ARMD DDIA P+R + Q+ FMD HPD G+CG + + + Sbjct: 73 GLINTLNESLDLIQSEYVARMDADDIATPYRLEEQLAFMDAHPDVGLCGGYYERFTDTES 132 Query: 130 SVTTKPVHHEEILCWQLLHCTIVHPTIMIRSSVLVNHGIRY-LDYPHAEDYEIWNRLGAA 188 V P HE+I + + H T+M R SVL + +RY + +AEDYE+W R Sbjct: 133 IVVRPPTTHEDISYALIFDNVMAHNTVMFRRSVLERYRLRYDPAFAYAEDYELWVRFARY 192 Query: 189 TKLMNLPEVLLMYRVHPGQISNTQQQVQLVQSERIRRDQLRLLGIEPTAEEYQTHLDFCH 248 ++L NLP VL+ YR HP S+ + Q + + +IR LG+EP + H Sbjct: 193 SRLANLPRVLVRYRFHPANTSSRFRHEQQIAAAKIRHIHRTNLGLEPRPGDAALHRQLFD 252 Query: 249 FRI 251 R Sbjct: 253 MRF 255 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.139 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,750,913,745 Number of extensions: 71688898 Number of successful extensions: 227380 Number of sequences better than 1.0e-05: 4236 Number of HSP's gapped: 225509 Number of HSP's successfully gapped: 4273 Length of query: 297 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 162 Effective length of database: 1,788,859,178 Effective search space: 289795186836 Effective search space used: 289795186836 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 131 (55.1 bits)