BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0266.0005.p (626 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K989.1 B3K989_9BACI Heat shock protein Hsp90 1025 0.0 B1D4Y8.1 B1D4Y8_9BACL Heat shock protein Hsp90 994 0.0 P46208.1 HTPG_BACSU Chaperone protein htpG 980 0.0 C0Z8X7.1 C0Z8X7_BREBN Heat shock protein HtpG 973 0.0 B1QBL8.1 B1QBL8_CLOBO Heat shock protein 959 0.0 >B3K989.1 B3K989_9BACI Heat shock protein Hsp90 Length = 625 Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust. Identities = 492/626 (78%), Positives = 552/626 (88%), Gaps = 1/626 (0%) Query: 1 MAKKEFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALADEGLVFNKEDY 60 MAKK+FKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKAL D+ L FNKEDY Sbjct: 1 MAKKQFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALTDDSLTFNKEDY 60 Query: 61 YIKVAADKASRTLTISDTGIGMTQEELENNLGIIANSGSFAFKKDNEAKDGHNIIGQFGV 120 Y+K+ ADKASRTLTI+DTGIGMT+E+LENNLG+IA SGS AFK +NEAKDGHNIIGQFGV Sbjct: 61 YVKITADKASRTLTIADTGIGMTKEDLENNLGVIAKSGSLAFKSENEAKDGHNIIGQFGV 120 Query: 121 GFYSAFMVAEDVTVVSKALGSDQAFKWESQGADGYTIEPTEKDTVGTEITLKIKANTEED 180 GFYSAFMVA+ VTV S+ALGSD+A+KWES+GADGYTI P EKD+VGTEI LKIK NTE+D Sbjct: 121 GFYSAFMVADVVTVTSRALGSDEAYKWESEGADGYTITPAEKDSVGTEIVLKIKENTEDD 180 Query: 181 NYDEFLEEYRLKSIIKKYSDFIRFPIKMEITSSKPKXXXXXXXXXXXXXQTVNSMVPIWR 240 YDE+LEEYRL++IIKKYSDFIR+PIKM++ + +PK QT+NSMVPIWR Sbjct: 181 QYDEYLEEYRLRAIIKKYSDFIRYPIKMDVKTQRPKADAENEFEEVQEEQTINSMVPIWR 240 Query: 241 KNKSELTDEDYNNFYTEKRYGFDKPLKHIHISADGAVVYNAILFIPENTPFDYYTKEYEK 300 KNK ELTDEDY NFY EKRYGFDKPLKHIH+ ADGAVVYNAILFIPENTPFDYYTKEYEK Sbjct: 241 KNKGELTDEDYVNFYNEKRYGFDKPLKHIHVKADGAVVYNAILFIPENTPFDYYTKEYEK 300 Query: 301 GLELYSNGVLIMNKCADLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIKSK 360 GLELYSNGVLIM+KC DLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIK+K Sbjct: 301 GLELYSNGVLIMDKCGDLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIKNK 360 Query: 361 IKSQLQSLLKDEREKYEKFYTSFGRQLKFGVYNDYGMEKETLQDLLMFYSSKEKKQVTLA 420 +KS LQ ++KDERE YEKF+ SFGR LKFGVYNDYGM KE LQDLL+F SSKEKK V+L Sbjct: 361 VKSALQGMMKDERENYEKFFASFGRGLKFGVYNDYGMNKEDLQDLLLFTSSKEKKLVSLD 420 Query: 421 EYVERMPEDQKYIYYASGESVERIEKLPQTEMVSDKGYEILYFTDDIDEFAIKMIMSYKE 480 EYV RMPEDQKYIYYASG+S++RIEKLPQTEMV DKGYEILYFTDD+DEFAIKM+M YKE Sbjct: 421 EYVSRMPEDQKYIYYASGDSIDRIEKLPQTEMVLDKGYEILYFTDDVDEFAIKMLMKYKE 480 Query: 481 KEFKNVSSGDLGLEENAEDKPSXXXXXXXXXXXXXMKGILSGKVKDVKASKRLKSHPVCL 540 KEFK+VSSGDLG++ A+ + + M +L+GKVK VKASKRLKSHPVCL Sbjct: 481 KEFKSVSSGDLGIDSEADKQENEAEESDNKELFEAMGSLLAGKVKSVKASKRLKSHPVCL 540 Query: 541 STEGELTIEMEKILKAMPNGQEVQADKVLEINIHHDVFKSLKAAAEGDKEKLGLYTNLLY 600 STEG+++IEMEKILKAMPNGQ++QADKVLEIN +H+VF+SLK A + D++KL LYTNLLY Sbjct: 541 STEGDVSIEMEKILKAMPNGQDIQADKVLEINTNHEVFQSLK-ALQADQDKLKLYTNLLY 599 Query: 601 NQALLIEGLQVNDPVQFTNDICKIMV 626 NQALLIEGL + DPV+FTNDICKIMV Sbjct: 600 NQALLIEGLPIADPVEFTNDICKIMV 625 >B1D4Y8.1 B1D4Y8_9BACL Heat shock protein Hsp90 Length = 626 Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust. Identities = 483/626 (77%), Positives = 544/626 (86%) Query: 1 MAKKEFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALADEGLVFNKEDY 60 M K++FKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKAL D+ LVF+KE Y Sbjct: 1 MEKQQFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALTDDQLVFDKESY 60 Query: 61 YIKVAADKASRTLTISDTGIGMTQEELENNLGIIANSGSFAFKKDNEAKDGHNIIGQFGV 120 YIKV DK +R L +SDTGIGMTQEELENNLG+IA SGS AFKK+NEAKDGHNIIGQFGV Sbjct: 61 YIKVTVDKDNRKLILSDTGIGMTQEELENNLGVIAKSGSLAFKKENEAKDGHNIIGQFGV 120 Query: 121 GFYSAFMVAEDVTVVSKALGSDQAFKWESQGADGYTIEPTEKDTVGTEITLKIKANTEED 180 GFYSAFMVA+ V V+S+ALGSD+AFKWES+GADGY+I +K +GT+I + IK NTE+D Sbjct: 121 GFYSAFMVADKVEVISRALGSDEAFKWESEGADGYSITTADKAGIGTDIIMTIKPNTEDD 180 Query: 181 NYDEFLEEYRLKSIIKKYSDFIRFPIKMEITSSKPKXXXXXXXXXXXXXQTVNSMVPIWR 240 NYDEFLEEYRL+SIIKKYSDFIR+PIKM++ +PK QT+NSMVPIWR Sbjct: 181 NYDEFLEEYRLRSIIKKYSDFIRYPIKMDVKGQRPKEGSEGEFEEYEEEQTINSMVPIWR 240 Query: 241 KNKSELTDEDYNNFYTEKRYGFDKPLKHIHISADGAVVYNAILFIPENTPFDYYTKEYEK 300 KNK+ELT EDY+NFY EKRYGFDKPLKH+HISADGAVVYNAILFIPENTPFDYYTKE+EK Sbjct: 241 KNKNELTQEDYDNFYFEKRYGFDKPLKHLHISADGAVVYNAILFIPENTPFDYYTKEFEK 300 Query: 301 GLELYSNGVLIMNKCADLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIKSK 360 GLELYSNGVLIM+KCADLLPDYFSFVKGMVDSEDLSLNISRE+LQHDRQL LIAKNIK+K Sbjct: 301 GLELYSNGVLIMDKCADLLPDYFSFVKGMVDSEDLSLNISRELLQHDRQLQLIAKNIKNK 360 Query: 361 IKSQLQSLLKDEREKYEKFYTSFGRQLKFGVYNDYGMEKETLQDLLMFYSSKEKKQVTLA 420 IKS LQSLLK+EREKYE FY +FGRQLKFGVYNDYG K+TLQDLL+FYSSKEKKQVTL Sbjct: 361 IKSTLQSLLKEEREKYEGFYKAFGRQLKFGVYNDYGANKDTLQDLLLFYSSKEKKQVTLE 420 Query: 421 EYVERMPEDQKYIYYASGESVERIEKLPQTEMVSDKGYEILYFTDDIDEFAIKMIMSYKE 480 EYV RMPEDQK+IYYASGES+ER+EKLPQ E+V+DKGYE+LYFTDDIDEFAIKMI +YK+ Sbjct: 421 EYVSRMPEDQKFIYYASGESIERLEKLPQAEIVTDKGYELLYFTDDIDEFAIKMIGTYKD 480 Query: 481 KEFKNVSSGDLGLEENAEDKPSXXXXXXXXXXXXXMKGILSGKVKDVKASKRLKSHPVCL 540 K FKNVSSGDLG+E + +K + M+ +L V VKASKRLKSHPVCL Sbjct: 481 KSFKNVSSGDLGIEADEAEKETEEEANDNKDLFAAMQEVLGDSVTGVKASKRLKSHPVCL 540 Query: 541 STEGELTIEMEKILKAMPNGQEVQADKVLEINIHHDVFKSLKAAAEGDKEKLGLYTNLLY 600 S+EGE+TIEMEK+LKAMPNGQ+V+A KVLEIN++HDVFK+LK A DK KL LYT+LL+ Sbjct: 541 SSEGEVTIEMEKVLKAMPNGQDVKASKVLEINVNHDVFKALKDAYATDKTKLSLYTSLLF 600 Query: 601 NQALLIEGLQVNDPVQFTNDICKIMV 626 NQALLIEGL V DPVQFTNDICKIM+ Sbjct: 601 NQALLIEGLTVQDPVQFTNDICKIML 626 >P46208.1 HTPG_BACSU Chaperone protein htpG Length = 626 Score = 980 bits (2533), Expect = 0.0, Method: Compositional matrix adjust. Identities = 475/626 (75%), Positives = 543/626 (86%) Query: 1 MAKKEFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALADEGLVFNKEDY 60 MAKKEFKAESKRLL+MMINSIYTQ+EIFLRELISN+SDAIDKIYYKAL D+ L F+K+ Y Sbjct: 1 MAKKEFKAESKRLLDMMINSIYTQKEIFLRELISNSSDAIDKIYYKALTDDALTFDKDSY 60 Query: 61 YIKVAADKASRTLTISDTGIGMTQEELENNLGIIANSGSFAFKKDNEAKDGHNIIGQFGV 120 YIKVAADK +RTLTISDTGIGMT++ELE +LG IA SGS AFKK+NE KDGH+IIGQFGV Sbjct: 61 YIKVAADKDARTLTISDTGIGMTKDELEQHLGTIAKSGSLAFKKENELKDGHDIIGQFGV 120 Query: 121 GFYSAFMVAEDVTVVSKALGSDQAFKWESQGADGYTIEPTEKDTVGTEITLKIKANTEED 180 GFY+AFMVA+ VTV+SKALGS++A+KWES GADGYTIEP EKD+VGT+I LKIK NTE+D Sbjct: 121 GFYAAFMVADVVTVISKALGSEEAYKWESAGADGYTIEPCEKDSVGTDIILKIKENTEDD 180 Query: 181 NYDEFLEEYRLKSIIKKYSDFIRFPIKMEITSSKPKXXXXXXXXXXXXXQTVNSMVPIWR 240 +YDEFLEEYRLK+IIKKYSDFIR+PIKM+ T +KPK QTVNSMVPIWR Sbjct: 181 SYDEFLEEYRLKAIIKKYSDFIRYPIKMDTTINKPKEGSENEFEEVQEEQTVNSMVPIWR 240 Query: 241 KNKSELTDEDYNNFYTEKRYGFDKPLKHIHISADGAVVYNAILFIPENTPFDYYTKEYEK 300 KNKSELTDEDY FY EK YGFDKPL H+HIS DGAV YNAILF+PEN PFDYY+KEYEK Sbjct: 241 KNKSELTDEDYEKFYAEKHYGFDKPLTHVHISVDGAVRYNAILFVPENMPFDYYSKEYEK 300 Query: 301 GLELYSNGVLIMNKCADLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIKSK 360 GLELYSNGVLIMNKCADLLPD+FSFVKGMVDSEDLSLNISREMLQHDRQL LIAKNI K Sbjct: 301 GLELYSNGVLIMNKCADLLPDHFSFVKGMVDSEDLSLNISREMLQHDRQLKLIAKNISKK 360 Query: 361 IKSQLQSLLKDEREKYEKFYTSFGRQLKFGVYNDYGMEKETLQDLLMFYSSKEKKQVTLA 420 IKS+LQSLLK +REKYE FY SFGRQLKFGVYND+G K+ L+DLL+FYSSKEKK V+L Sbjct: 361 IKSELQSLLKKDREKYETFYKSFGRQLKFGVYNDFGANKDQLKDLLLFYSSKEKKLVSLD 420 Query: 421 EYVERMPEDQKYIYYASGESVERIEKLPQTEMVSDKGYEILYFTDDIDEFAIKMIMSYKE 480 EYV RMPE+QK+IYYA+G+S +RIEKLPQTEMV+DKGYEILYFT+DIDEFAIKM+ SY+E Sbjct: 421 EYVSRMPEEQKFIYYATGDSYDRIEKLPQTEMVADKGYEILYFTEDIDEFAIKMLASYQE 480 Query: 481 KEFKNVSSGDLGLEENAEDKPSXXXXXXXXXXXXXMKGILSGKVKDVKASKRLKSHPVCL 540 KEFK+VSSGDLG++ + + K S MK ILS KVK+V+ SKRLKSHPVCL Sbjct: 481 KEFKSVSSGDLGIDTDEDQKQSEEEESKYKDLFEEMKNILSDKVKNVRISKRLKSHPVCL 540 Query: 541 STEGELTIEMEKILKAMPNGQEVQADKVLEINIHHDVFKSLKAAAEGDKEKLGLYTNLLY 600 + +GE+TIEMEKIL AMP+ Q V+A+KVLEIN +H+VF++L+ A E DKEKL LYTNLLY Sbjct: 541 AADGEVTIEMEKILNAMPDSQNVKAEKVLEINPNHEVFQTLQDAFEQDKEKLSLYTNLLY 600 Query: 601 NQALLIEGLQVNDPVQFTNDICKIMV 626 NQALLIEGL + DPV+FTN+ICK+MV Sbjct: 601 NQALLIEGLPIQDPVEFTNNICKVMV 626 >C0Z8X7.1 C0Z8X7_BREBN Heat shock protein HtpG Length = 626 Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust. Identities = 485/626 (77%), Positives = 541/626 (86%) Query: 1 MAKKEFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALADEGLVFNKEDY 60 M KK+F+AES RLLEMMI+SIYTQ+EIFLRELISN+SDAIDKIYYK+L DE LVF+KE+Y Sbjct: 1 MEKKQFQAESTRLLEMMIHSIYTQKEIFLRELISNSSDAIDKIYYKSLVDEQLVFDKENY 60 Query: 61 YIKVAADKASRTLTISDTGIGMTQEELENNLGIIANSGSFAFKKDNEAKDGHNIIGQFGV 120 +IK+A +K +RTLT++DTGIGMTQ+ELENNLG+IA SGS AFKK+N+AKDG+NIIGQFGV Sbjct: 61 FIKIAVNKDTRTLTLTDTGIGMTQDELENNLGVIAKSGSLAFKKENDAKDGYNIIGQFGV 120 Query: 121 GFYSAFMVAEDVTVVSKALGSDQAFKWESQGADGYTIEPTEKDTVGTEITLKIKANTEED 180 GFYSAFMVA+ VTV+SKALGSD +KWES GADGYTIEP KD VGTEI L+IK NTEE+ Sbjct: 121 GFYSAFMVADKVTVISKALGSDTGYKWESSGADGYTIEPCHKDLVGTEIILEIKENTEEE 180 Query: 181 NYDEFLEEYRLKSIIKKYSDFIRFPIKMEITSSKPKXXXXXXXXXXXXXQTVNSMVPIWR 240 NYDEFLEEYRLK+IIKKYSDFIR+PIKM+IT KPK Q VNSMVPIWR Sbjct: 181 NYDEFLEEYRLKAIIKKYSDFIRYPIKMDITQHKPKEGSENEYEQVTEEQIVNSMVPIWR 240 Query: 241 KNKSELTDEDYNNFYTEKRYGFDKPLKHIHISADGAVVYNAILFIPENTPFDYYTKEYEK 300 KNKSELT EDY FY K YGFDKPL HIHI+ADGAVVY AIL+IPE+ PFDYY+KEYEK Sbjct: 241 KNKSELTTEDYEQFYASKHYGFDKPLGHIHINADGAVVYQAILYIPESMPFDYYSKEYEK 300 Query: 301 GLELYSNGVLIMNKCADLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIKSK 360 GLELY+NGVLIMNKCADLLPDYFSFVKGMVDSE LSLNISREMLQHDRQL LIAKNI SK Sbjct: 301 GLELYANGVLIMNKCADLLPDYFSFVKGMVDSESLSLNISREMLQHDRQLKLIAKNITSK 360 Query: 361 IKSQLQSLLKDEREKYEKFYTSFGRQLKFGVYNDYGMEKETLQDLLMFYSSKEKKQVTLA 420 IKSQLQSLLK EREKYE FY SFGRQLK+G+Y+DYG KETLQDLLMFYSSKEKK VTL Sbjct: 361 IKSQLQSLLKTEREKYELFYKSFGRQLKYGMYSDYGTHKETLQDLLMFYSSKEKKLVTLQ 420 Query: 421 EYVERMPEDQKYIYYASGESVERIEKLPQTEMVSDKGYEILYFTDDIDEFAIKMIMSYKE 480 EYVERMPEDQKYIYYASGES+ERIEKLPQTE+VS+KGYEILYFTDD+DEFAIKM+M+YKE Sbjct: 421 EYVERMPEDQKYIYYASGESIERIEKLPQTELVSEKGYEILYFTDDVDEFAIKMMMNYKE 480 Query: 481 KEFKNVSSGDLGLEENAEDKPSXXXXXXXXXXXXXMKGILSGKVKDVKASKRLKSHPVCL 540 KEFK+VSSGDLG+E E+K + M +L GKVK VKASKRLKSHPVCL Sbjct: 481 KEFKSVSSGDLGIEPGEEEKAAEAENENNKDLFDYMASLLEGKVKAVKASKRLKSHPVCL 540 Query: 541 STEGELTIEMEKILKAMPNGQEVQADKVLEINIHHDVFKSLKAAAEGDKEKLGLYTNLLY 600 STEGE+TIEMEKIL AMPN V+ADKVLEIN++H VF+SLK A + DKEK+ LYT LLY Sbjct: 541 STEGEVTIEMEKILNAMPNNPSVKADKVLEINVNHAVFQSLKGAFDTDKEKVNLYTALLY 600 Query: 601 NQALLIEGLQVNDPVQFTNDICKIMV 626 NQALLIEGL + DPV+FTNDICK+MV Sbjct: 601 NQALLIEGLPIQDPVEFTNDICKVMV 626 >B1QBL8.1 B1QBL8_CLOBO Heat shock protein Length = 626 Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/625 (74%), Positives = 535/625 (85%) Query: 1 MAKKEFKAESKRLLEMMINSIYTQREIFLRELISNASDAIDKIYYKALADEGLVFNKEDY 60 M K+FKAESKRLL++MINSIYT +EIFLRELISN+SDAIDKIYYK L D+ L F ++DY Sbjct: 1 METKQFKAESKRLLDLMINSIYTHKEIFLRELISNSSDAIDKIYYKTLTDDSLKFERDDY 60 Query: 61 YIKVAADKASRTLTISDTGIGMTQEELENNLGIIANSGSFAFKKDNEAKDGHNIIGQFGV 120 YI+V +DK +R L I+DTGIGMT+EELENNLG+IA SGS FKK+NE K+G++IIGQFGV Sbjct: 61 YIRVVSDKENRILKIADTGIGMTKEELENNLGVIAKSGSLQFKKENEVKEGYDIIGQFGV 120 Query: 121 GFYSAFMVAEDVTVVSKALGSDQAFKWESQGADGYTIEPTEKDTVGTEITLKIKANTEED 180 GFYSAF+V++DVTV+SKA GS++A+KW S+GA+GYTIEP EK+ GTEI LKIK NTEE+ Sbjct: 121 GFYSAFLVSDDVTVISKAFGSNEAYKWNSKGAEGYTIEPCEKEAYGTEIILKIKDNTEEE 180 Query: 181 NYDEFLEEYRLKSIIKKYSDFIRFPIKMEITSSKPKXXXXXXXXXXXXXQTVNSMVPIWR 240 NYDEFLEEY LKSIIKKYSDFIR+PIKM++T +KPK +T+NSMVPIWR Sbjct: 181 NYDEFLEEYTLKSIIKKYSDFIRYPIKMDLTKTKPKEDNKEEFEEYKEEETINSMVPIWR 240 Query: 241 KNKSELTDEDYNNFYTEKRYGFDKPLKHIHISADGAVVYNAILFIPENTPFDYYTKEYEK 300 KNK+EL EDY NFY EK YGFDKP+K+IH S DG V YNAILFIPE TP+D+YTKEYEK Sbjct: 241 KNKNELKSEDYENFYAEKHYGFDKPIKYIHTSVDGVVSYNAILFIPETTPYDFYTKEYEK 300 Query: 301 GLELYSNGVLIMNKCADLLPDYFSFVKGMVDSEDLSLNISREMLQHDRQLTLIAKNIKSK 360 GLELYS+GVLIMNKC DLLPDYF FVKG+VDSEDLSLNISRE+LQHDRQL LIAKNIK+K Sbjct: 301 GLELYSSGVLIMNKCGDLLPDYFGFVKGIVDSEDLSLNISREILQHDRQLKLIAKNIKTK 360 Query: 361 IKSQLQSLLKDEREKYEKFYTSFGRQLKFGVYNDYGMEKETLQDLLMFYSSKEKKQVTLA 420 IK++L+SLLK ER+KYEKFY SFGRQLK+GVY+D+G K+ LQDLLMFYSSKEKK VTLA Sbjct: 361 IKNELESLLKKERDKYEKFYESFGRQLKYGVYSDFGSNKDILQDLLMFYSSKEKKMVTLA 420 Query: 421 EYVERMPEDQKYIYYASGESVERIEKLPQTEMVSDKGYEILYFTDDIDEFAIKMIMSYKE 480 EYV RMPEDQKYIYYA GES ERIEKLPQ E V DKGYE+LYFTDDIDEFAIKM+M+YKE Sbjct: 421 EYVSRMPEDQKYIYYAVGESNERIEKLPQIEGVLDKGYEVLYFTDDIDEFAIKMLMNYKE 480 Query: 481 KEFKNVSSGDLGLEENAEDKPSXXXXXXXXXXXXXMKGILSGKVKDVKASKRLKSHPVCL 540 KEFK+VSSGDLG+E ++ S MK ILSGKVKDV+ASKRLK+HPVCL Sbjct: 481 KEFKSVSSGDLGIEGEEKENTSNSDDKENKELFESMKDILSGKVKDVRASKRLKNHPVCL 540 Query: 541 STEGELTIEMEKILKAMPNGQEVQADKVLEINIHHDVFKSLKAAAEGDKEKLGLYTNLLY 600 + EGEL+IEMEK+L AMPN Q ++ADKVLEINI+HDVFKSLK A EGDKEKL LYT+LLY Sbjct: 541 ANEGELSIEMEKVLNAMPNNQNIKADKVLEININHDVFKSLKEAYEGDKEKLKLYTDLLY 600 Query: 601 NQALLIEGLQVNDPVQFTNDICKIM 625 NQALLIEGL +NDPV+FTN+ICKIM Sbjct: 601 NQALLIEGLAINDPVEFTNNICKIM 625 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.366 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,409,457,194 Number of extensions: 142555239 Number of successful extensions: 335022 Number of sequences better than 1.0e-05: 2460 Number of HSP's gapped: 323276 Number of HSP's successfully gapped: 3204 Length of query: 626 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 484 Effective length of database: 1,722,912,073 Effective search space: 833889443332 Effective search space used: 833889443332 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 134 (56.2 bits)