BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0266.0001.p (579 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A7VPB5.1 A7VPB5_9CLOT Putative uncharacterized protein 661 0.0 A6LVD2.1 A6LVD2_CLOB8 ABC transporter related 646 0.0 B8I741.1 B8I741_CLOCE ABC transporter transmembrane region 607 e-171 Q97GH5.1 Q97GH5_CLOAB Uncharacterized ABC transporter, ATPase co... 606 e-171 A8RI87.1 A8RI87_9CLOT Putative uncharacterized protein 596 e-168 >A7VPB5.1 A7VPB5_9CLOT Putative uncharacterized protein Length = 580 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 314/576 (54%), Positives = 411/576 (71%) Query: 1 MNAGATWKRIIVYTKQHRGIAIAAVFCAILSVVASLIGPLLIGRTVDQMAGLGQVDFDQV 60 M KR+ Y + + G I + CA+ S+ +L+GP+LIG+ +DQ+ G GQV+F + Sbjct: 1 MTPKEILKRLFQYARPYAGYLIGGLLCAVASIALTLLGPVLIGKAIDQIVGPGQVNFPET 60 Query: 61 LRLLLILAAVYIAGSFFGWLLTYYTNRIAYRTVYDLRRELFDKLNVLPLKFHDNHPQGDS 120 L+ L++L + F WL+T TN++ Y TV DLR+E F KL+ +PLK+ D +P GD Sbjct: 61 LKYLILLGITVALAAVFQWLMTLCTNKVTYYTVNDLRQEAFGKLHQVPLKYIDGNPHGDI 120 Query: 121 ISRFVNDMDAVSDGLLQGFSTLLTGVVTIAGAIGLMLYISPVMTLVVLLSAPAAFYVARF 180 I+R +ND+D +SDGLLQG + L TGVVTI G + ML I+P++ LVV+L P + +VA F Sbjct: 121 INRLINDIDFISDGLLQGLTQLFTGVVTIVGTLCFMLGINPLIALVVVLVTPLSLFVAVF 180 Query: 181 ITTRSQKLFREQARILGGLNGYVEEIVGGQKVVQAFRYEDHSFAEFSGRNNELYQTGVKA 240 + S K+F+EQ + G L G VEE++G QKVV+AF YE+ + +F N LY+ G KA Sbjct: 181 VAKSSNKMFKEQTKTQGELGGCVEEMLGSQKVVKAFSYEERAEEKFQEINARLYKCGQKA 240 Query: 241 QFYGSLSNPSTRLVNNITFSVIAMIGSALVIGGHFTVGDLSSFLIYSNLFAKPFNEITGV 300 QF+ SLSNPSTR VN I ++ ++G+ VI G+ +VG +SSFL Y+N + KPFNE+TGV Sbjct: 241 QFFSSLSNPSTRFVNGIVYAAAGVVGAISVINGNLSVGGVSSFLTYANQYTKPFNEVTGV 300 Query: 301 ITQLQSATASAQRIFAILDLPPETQDAEDARVLGISQGTIQFDNVSFAYSPERPLIRNFS 360 ITQLQ+A +SA R+FA+LD P E DA DA+ + +G ++ D+VSFAY ++ LI NF+ Sbjct: 301 ITQLQTAFSSAGRVFALLDQPEEAPDAPDAKTVKSCEGRVRIDHVSFAYRKDQKLIENFN 360 Query: 361 LEVKPGTRVAIVGQTGAGKTTLVNLLMRFYDVDSGSIKLDGTDIRAITRDSLRRNFGMVL 420 LE KPG R+AIVG TG GKTT++NLLMRFYDV+ G I +DG ++ +TRDSLRR FGMVL Sbjct: 361 LETKPGQRIAIVGPTGCGKTTMINLLMRFYDVNQGEISVDGVPVKEMTRDSLRRLFGMVL 420 Query: 421 QDTWLYGGTIRDNIAYGKPXXXXXXXXXXXXXXXXHSFIKRLPEGYATKISGSGDNLSQG 480 QDTWLY T+R+NIAYGKP FI+R+P+GY T IS G NLSQG Sbjct: 421 QDTWLYSATVRENIAYGKPNATMEEIRAAAKAAYADGFIRRMPQGYDTLISEDGGNLSQG 480 Query: 481 QKQLLTIARVMLADPPMLILDEATSSIDTLTEARIQKAFLAMISGRTSFVIAHRLSTIRE 540 QKQLL+IARVML DPPMLILDEATSSIDTLTE R+QKAF M+ GRTSF++AHRLSTI+ Sbjct: 481 QKQLLSIARVMLVDPPMLILDEATSSIDTLTEIRVQKAFDRMMEGRTSFIVAHRLSTIKN 540 Query: 541 ADVILYMKDGDIVESGTHEELLQRGGHYARLYNSQF 576 ADVIL M G+I+E G+H+ELL RGG Y RLYNSQF Sbjct: 541 ADVILVMNQGNIIEQGSHQELLDRGGFYCRLYNSQF 576 >A6LVD2.1 A6LVD2_CLOB8 ABC transporter related Length = 579 Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/572 (53%), Positives = 409/572 (71%) Query: 5 ATWKRIIVYTKQHRGIAIAAVFCAILSVVASLIGPLLIGRTVDQMAGLGQVDFDQVLRLL 64 +T+ R+I Y +++G A++ A++S + PL++GR++D + G+VDFD +++ + Sbjct: 4 STFSRLISYVSKYKGYMFASLIFALISNILIAFMPLIVGRSIDHIVAKGEVDFDGLIKTI 63 Query: 65 LILAAVYIAGSFFGWLLTYYTNRIAYRTVYDLRRELFDKLNVLPLKFHDNHPQGDSISRF 124 +IL +Y+ + F WL T N +AY TV DLR E +K++ LPLK+ D +P GD ISR Sbjct: 64 IILGVIYVISALFTWLFTIVANTVAYNTVKDLRNEALNKISSLPLKYFDKNPHGDIISRL 123 Query: 125 VNDMDAVSDGLLQGFSTLLTGVVTIAGAIGLMLYISPVMTLVVLLSAPAAFYVARFITTR 184 NDMD VSDGL QG + G++TI ++ LM+ +S +TLV++L P F +A FIT R Sbjct: 124 TNDMDNVSDGLFQGITQFYPGIITIISSLVLMVSLSFKLTLVIVLMTPFCFLIASFITKR 183 Query: 185 SQKLFREQARILGGLNGYVEEIVGGQKVVQAFRYEDHSFAEFSGRNNELYQTGVKAQFYG 244 S K+F+EQ + LG LNGY+EEIVG QKVV+ F YE+ + FSG N+ LY+ G AQFY Sbjct: 184 SNKMFKEQQKTLGELNGYIEEIVGSQKVVRLFGYEERAQESFSGINSRLYKCGQLAQFYS 243 Query: 245 SLSNPSTRLVNNITFSVIAMIGSALVIGGHFTVGDLSSFLIYSNLFAKPFNEITGVITQL 304 SL+NP+TR VNNIT+ ++ ++G L + +VG +SSFL YS F++P N IT V TQL Sbjct: 244 SLTNPATRFVNNITYILVGLVGGILSVLSGLSVGVISSFLTYSTQFSQPINNITSVATQL 303 Query: 305 QSATASAQRIFAILDLPPETQDAEDARVLGISQGTIQFDNVSFAYSPERPLIRNFSLEVK 364 Q+A AS +RIF+I+D PE D+++A + G ++FDNVSF+Y+ + PLI NFS+ +K Sbjct: 304 QAALASCERIFSIIDEEPEKADSKEAENIESCDGNVEFDNVSFSYNKKVPLIENFSVNIK 363 Query: 365 PGTRVAIVGQTGAGKTTLVNLLMRFYDVDSGSIKLDGTDIRAITRDSLRRNFGMVLQDTW 424 G+ +AIVG TGAGKTT+VNLLMRFYD++ G I +DG I +TR++LRR FGMVLQDTW Sbjct: 364 KGSTIAIVGPTGAGKTTIVNLLMRFYDLEKGRITIDGKSINDLTRNNLRRQFGMVLQDTW 423 Query: 425 LYGGTIRDNIAYGKPXXXXXXXXXXXXXXXXHSFIKRLPEGYATKISGSGDNLSQGQKQL 484 L+ GTIR NIAYGKP HSFIKRLP+GY T I+ SG NLS+GQKQL Sbjct: 424 LFEGTIRQNIAYGKPNATLEEVENAAKAAFIHSFIKRLPDGYDTIITESGGNLSEGQKQL 483 Query: 485 LTIARVMLADPPMLILDEATSSIDTLTEARIQKAFLAMISGRTSFVIAHRLSTIREADVI 544 LTIARVML DPP+LILDEATS++DT TE +IQ AFL+M+ GRTSFVIAHRLSTIR+AD+I Sbjct: 484 LTIARVMLIDPPILILDEATSNVDTRTELKIQNAFLSMMKGRTSFVIAHRLSTIRDADII 543 Query: 545 LYMKDGDIVESGTHEELLQRGGHYARLYNSQF 576 L MK+G I E G H+EL+ +GG Y LYNSQF Sbjct: 544 LVMKNGKITERGNHDELVNKGGIYTELYNSQF 575 >B8I741.1 B8I741_CLOCE ABC transporter transmembrane region Length = 582 Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust. Identities = 291/571 (50%), Positives = 397/571 (69%) Query: 8 KRIIVYTKQHRGIAIAAVFCAILSVVASLIGPLLIGRTVDQMAGLGQVDFDQVLRLLLIL 67 +R+ Y ++ + AV A LS + + GP +IG+ VD + G G VDF +L +++I+ Sbjct: 7 RRLGRYILTNKPYLLGAVIFAALSNILMVAGPFIIGKGVDAIVGKGHVDFKIILYVVIII 66 Query: 68 AAVYIAGSFFGWLLTYYTNRIAYRTVYDLRRELFDKLNVLPLKFHDNHPQGDSISRFVND 127 +Y+ + F W L T ++ RTV LR+++F+ + PL+F D+ P GD +SR ND Sbjct: 67 FILYLISAIFQWSLQVITAILSNRTVEKLRKDVFNHIMEAPLRFFDHKPHGDIMSRLTND 126 Query: 128 MDAVSDGLLQGFSTLLTGVVTIAGAIGLMLYISPVMTLVVLLSAPAAFYVARFITTRSQK 187 M+ + +G+ Q + G+++I G++ M ++P +TL+V++ P F +A FIT RS K Sbjct: 127 MENIGEGIYQSVTQFFAGIISILGSLIFMFVLNPWITLIVIVMTPVTFLIASFITKRSSK 186 Query: 188 LFREQARILGGLNGYVEEIVGGQKVVQAFRYEDHSFAEFSGRNNELYQTGVKAQFYGSLS 247 +F+EQ+R+ G LNGY+EEI+G QKVV+AF YE+ + +F N LY+ G AQFY SL Sbjct: 187 MFKEQSRVNGELNGYIEEIIGNQKVVKAFNYEEKTQQKFEEINRRLYKCGRWAQFYSSLV 246 Query: 248 NPSTRLVNNITFSVIAMIGSALVIGGHFTVGDLSSFLIYSNLFAKPFNEITGVITQLQSA 307 NPSTRLVNNIT+ ++ M G + G ++G +SSFL YS F++P N +T V TQ+QSA Sbjct: 247 NPSTRLVNNITYVLLGMTGGIASLAGRLSIGYISSFLTYSTYFSQPINNVTSVTTQIQSA 306 Query: 308 TASAQRIFAILDLPPETQDAEDARVLGISQGTIQFDNVSFAYSPERPLIRNFSLEVKPGT 367 ASA+R+FA++D E Q D L + G ++F++VSF+YSPE+PLI+NF+L VK G Sbjct: 307 IASAERVFAVMDEEVEKQSDNDGITLSKTNGNVRFEDVSFSYSPEKPLIQNFNLNVKEGQ 366 Query: 368 RVAIVGQTGAGKTTLVNLLMRFYDVDSGSIKLDGTDIRAITRDSLRRNFGMVLQDTWLYG 427 R+AIVG TG+GKTTLVNLLMRFYD D G I +D +I I++DSLR++FGMVLQDTWL+ Sbjct: 367 RIAIVGPTGSGKTTLVNLLMRFYDTDKGYIFIDDKNINKISKDSLRQSFGMVLQDTWLFS 426 Query: 428 GTIRDNIAYGKPXXXXXXXXXXXXXXXXHSFIKRLPEGYATKISGSGDNLSQGQKQLLTI 487 GTIR+NIAYG HSFIKRLP+GY T+++ G NLSQGQ+QLLTI Sbjct: 427 GTIRENIAYGNQDATDEEIKKAAISANAHSFIKRLPKGYETELTEGGSNLSQGQRQLLTI 486 Query: 488 ARVMLADPPMLILDEATSSIDTLTEARIQKAFLAMISGRTSFVIAHRLSTIREADVILYM 547 ARVML PPMLILDEATSS+DT TE IQKAFL M+ GRTSFVIAHRLSTIREADVIL M Sbjct: 487 ARVMLVIPPMLILDEATSSVDTRTELNIQKAFLKMMEGRTSFVIAHRLSTIREADVILVM 546 Query: 548 KDGDIVESGTHEELLQRGGHYARLYNSQFAA 578 +G +VE G+HE+LL++ G Y +LY SQ+ + Sbjct: 547 NNGTVVEQGSHEDLLKKNGFYKKLYLSQYES 577 >Q97GH5.1 Q97GH5_CLOAB Uncharacterized ABC transporter, ATPase component Length = 579 Score = 606 bits (1563), Expect = e-171, Method: Compositional matrix adjust. Identities = 296/571 (51%), Positives = 400/571 (70%) Query: 6 TWKRIIVYTKQHRGIAIAAVFCAILSVVASLIGPLLIGRTVDQMAGLGQVDFDQVLRLLL 65 T R+ Y +++ ++ A++S V PL++G+ +D + G+VDF+ +L++++ Sbjct: 5 TLFRLASYVGKYKMYMFISLIFALISNVLIAFMPLIVGKGIDNIKSQGKVDFNNLLKIII 64 Query: 66 ILAAVYIAGSFFGWLLTYYTNRIAYRTVYDLRRELFDKLNVLPLKFHDNHPQGDSISRFV 125 +LAAVY+ S F WL T N +AY TV DLR E K++ LPLK+ D +P GD +SR Sbjct: 65 VLAAVYLISSIFTWLFTAVANILAYNTVRDLRNEALSKISTLPLKYFDVNPHGDIMSRLT 124 Query: 126 NDMDAVSDGLLQGFSTLLTGVVTIAGAIGLMLYISPVMTLVVLLSAPAAFYVARFITTRS 185 NDMDA+SDGL QG + +VTI +I LML +S +T +++L P F++A FIT RS Sbjct: 125 NDMDAISDGLFQGITQFFPAIVTIISSILLMLSLSIKLTGIIILMTPLCFFIASFITKRS 184 Query: 186 QKLFREQARILGGLNGYVEEIVGGQKVVQAFRYEDHSFAEFSGRNNELYQTGVKAQFYGS 245 K+F++Q +G LNGY+EEI+G +K+V+ F YE + +FS N+ LY G AQFY S Sbjct: 185 NKMFKQQQNTVGELNGYIEEIIGNEKIVKLFGYEKRAEKKFSEINSRLYNCGQLAQFYSS 244 Query: 246 LSNPSTRLVNNITFSVIAMIGSALVIGGHFTVGDLSSFLIYSNLFAKPFNEITGVITQLQ 305 L+NPSTR VNNIT+ ++ +G L + ++G +SSFL YS F++P N +TGV TQLQ Sbjct: 245 LTNPSTRFVNNITYVLVGAVGGLLAVLSGLSIGTISSFLTYSTQFSQPINNVTGVATQLQ 304 Query: 306 SATASAQRIFAILDLPPETQDAEDARVLGISQGTIQFDNVSFAYSPERPLIRNFSLEVKP 365 +A ASA+R+F+ILD PE +D E A+ +G I F+NVSF+Y+ ++PLI NFS+++K Sbjct: 305 AAFASAERVFSILDEIPEKKDNEGAKKFEHCEGNISFNNVSFSYNKKQPLIENFSVDIKK 364 Query: 366 GTRVAIVGQTGAGKTTLVNLLMRFYDVDSGSIKLDGTDIRAITRDSLRRNFGMVLQDTWL 425 G+ +AIVG TGAGKTT+VNLLMRFYD+D G I +DG DI + R+ +R FGMVLQDTWL Sbjct: 365 GSTIAIVGPTGAGKTTMVNLLMRFYDIDGGKITIDGKDINKMKRNDVRGQFGMVLQDTWL 424 Query: 426 YGGTIRDNIAYGKPXXXXXXXXXXXXXXXXHSFIKRLPEGYATKISGSGDNLSQGQKQLL 485 + GTI++NIAYGKP H+FIKRL +GY T+I+ SG NLS+GQKQLL Sbjct: 425 FEGTIKENIAYGKPDASMEEIESAAKKAYIHNFIKRLSDGYDTRITESGGNLSEGQKQLL 484 Query: 486 TIARVMLADPPMLILDEATSSIDTLTEARIQKAFLAMISGRTSFVIAHRLSTIREADVIL 545 TIARVML +PPMLILDEATSS+DT TE +IQ AFL M+ GRTSFVIAHRLSTI++AD+IL Sbjct: 485 TIARVMLINPPMLILDEATSSVDTRTEIKIQNAFLKMMEGRTSFVIAHRLSTIKDADLIL 544 Query: 546 YMKDGDIVESGTHEELLQRGGHYARLYNSQF 576 MK+G IVE G HEEL+ G Y +Y SQF Sbjct: 545 VMKNGHIVERGKHEELVNSEGLYREIYESQF 575 >A8RI87.1 A8RI87_9CLOT Putative uncharacterized protein Length = 589 Score = 596 bits (1536), Expect = e-168, Method: Compositional matrix adjust. Identities = 292/572 (51%), Positives = 393/572 (68%) Query: 6 TWKRIIVYTKQHRGIAIAAVFCAILSVVASLIGPLLIGRTVDQMAGLGQVDFDQVLRLLL 65 T KRI+ Y Q++ I ++F A+++V +L P+L GR VD++ G VDF + +L+ Sbjct: 16 TLKRILKYISQYKWSVILSLFLALITVALTLYVPILTGRAVDRIVSAGHVDFAGLKGILI 75 Query: 66 ILAAVYIAGSFFGWLLTYYTNRIAYRTVYDLRRELFDKLNVLPLKFHDNHPQGDSISRFV 125 + S WL+ + N I YR V D+R F++L V+PL + D HP GD ISR + Sbjct: 76 TILGAVAVTSVSQWLMNHINNIITYRVVKDIRTRAFNQLEVMPLSYIDVHPSGDIISRII 135 Query: 126 NDMDAVSDGLLQGFSTLLTGVVTIAGAIGLMLYISPVMTLVVLLSAPAAFYVARFITTRS 185 D+D S+GLL GF+ L TGV+TIAG + ML I P +T VV++ P + +VA FI ++ Sbjct: 136 ADIDQFSEGLLMGFTQLFTGVLTIAGTLLFMLSIQPAITAVVVVLTPISLFVASFIAKKT 195 Query: 186 QKLFREQARILGGLNGYVEEIVGGQKVVQAFRYEDHSFAEFSGRNNELYQTGVKAQFYGS 245 +FR+Q+ G L +E++G KVVQAF +++ + +F N L ++A F+ S Sbjct: 196 FVMFRKQSETRGELTSLTDEMLGNMKVVQAFGHQEEAQKQFEEINERLAGYSLRATFFSS 255 Query: 246 LSNPSTRLVNNITFSVIAMIGSALVIGGHFTVGDLSSFLIYSNLFAKPFNEITGVITQLQ 305 ++NP+TR VN++ ++ + + G+ I G TVG L+SFL Y+N + KPFNEI+GV+T+LQ Sbjct: 256 ITNPATRFVNSLVYAAVGITGAYGAIRGLITVGQLTSFLSYANQYTKPFNEISGVVTELQ 315 Query: 306 SATASAQRIFAILDLPPETQDAEDARVLGISQGTIQFDNVSFAYSPERPLIRNFSLEVKP 365 +A ASA R+F ++D +D EDA VL ++G++ + V F+Y+PE+ LI +F+L V+P Sbjct: 316 NALASAARVFELIDEKTMIEDREDATVLRGAKGSVDLEQVCFSYTPEKKLIEDFNLSVQP 375 Query: 366 GTRVAIVGQTGAGKTTLVNLLMRFYDVDSGSIKLDGTDIRAITRDSLRRNFGMVLQDTWL 425 G RVAIVG TG GKTT++NLLMRFYDVDSG+IK++GTDIR +TR+SLR ++GMVLQDTWL Sbjct: 376 GQRVAIVGPTGCGKTTIINLLMRFYDVDSGAIKVEGTDIRDVTRESLRTSYGMVLQDTWL 435 Query: 426 YGGTIRDNIAYGKPXXXXXXXXXXXXXXXXHSFIKRLPEGYATKISGSGDNLSQGQKQLL 485 GTIRDNIAYG P H FI R+P+GYAT IS G NLSQGQKQLL Sbjct: 436 KSGTIRDNIAYGHPNATEEEIIQAAKQAHAHGFIMRMPDGYATVISEDGGNLSQGQKQLL 495 Query: 486 TIARVMLADPPMLILDEATSSIDTLTEARIQKAFLAMISGRTSFVIAHRLSTIREADVIL 545 IARVML PPMLILDEATSSIDT TE ++QKAF M+ GRTSF++AHRLSTIREADVIL Sbjct: 496 CIARVMLCLPPMLILDEATSSIDTRTEIKVQKAFAQMMEGRTSFIVAHRLSTIREADVIL 555 Query: 546 YMKDGDIVESGTHEELLQRGGHYARLYNSQFA 577 M+DG IVE G HEELL G YA +YN+QFA Sbjct: 556 VMRDGKIVEKGKHEELLGMHGFYADIYNAQFA 587 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.139 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,153,895,829 Number of extensions: 126000950 Number of successful extensions: 727509 Number of sequences better than 1.0e-05: 43614 Number of HSP's gapped: 681998 Number of HSP's successfully gapped: 46972 Length of query: 579 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 438 Effective length of database: 1,732,333,088 Effective search space: 758761892544 Effective search space used: 758761892544 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 134 (56.2 bits)