BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0265.0011.p
         (148 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KFJ5.1 B3KFJ5_9BACI Putative uncharacterized protein                 73   1e-11

>B3KFJ5.1 B3KFJ5_9BACI Putative uncharacterized protein
          Length = 149

 Score = 72.8 bits (177), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/161 (32%), Positives = 76/161 (47%), Gaps = 26/161 (16%)

Query: 1   MTTRIQAYFRTESEAEGAKTALIPYGVEGIEVSELTDPLDKGDHRSRNILLPFVPYNNSX 60
           M+ +IQAYFRTE +AEGA+T L+ Y  E +EV +L D +  G     NIL+P VP+ N+ 
Sbjct: 1   MSRQIQAYFRTEDDAEGARTRLLTYNTEQLEVGQLQDSVRSGG----NILVPLVPWGNA- 55

Query: 61  XXXXXXXXXXXXXXXXXXXXXPG--IGVDNDLGDNTDTSR------------AGDVRSAT 106
                                PG  +G    +    DTSR             GD     
Sbjct: 56  -------GTGGATAGATTMGAPGGVVGAPGVIVGARDTSRDIAQDRPDSDDLPGDGWREA 108

Query: 107 DVDDRDLSDVHYVMDLRVPEEKRNEVVEVLRGKQAFVEIFE 147
           DV D D  D+ Y + ++V +E  +++V  LR   A+VE F+
Sbjct: 109 DVTDGDYDDLRYTLSVKVRDEDYDQIVHDLRANNAYVERFD 149


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.314    0.136    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 713,596,459
Number of extensions: 23008027
Number of successful extensions: 42249
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 42248
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 3,060,696,203
Length adjustment: 110
Effective length of query: 38
Effective length of database: 2,024,384,553
Effective search space: 76926613014
Effective search space used: 76926613014
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 126 (53.1 bits)