BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0265.0001.p (381 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1TFM0.1 C1TFM0_9FIRM Transposase family protein 208 7e-52 C1TIR9.1 C1TIR9_9FIRM Putative uncharacterized protein 203 2e-50 Q5ZTU2.1 Q5ZTU2_LEGPH Transposase Tn5 199 4e-49 B4VK20.1 B4VK20_9CYAN Putative uncharacterized protein 191 1e-46 B4VVQ9.1 B4VVQ9_9CYAN Putative uncharacterized protein 191 2e-46 >C1TFM0.1 C1TFM0_9FIRM Transposase family protein Length = 467 Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 115/350 (32%), Positives = 182/350 (52%), Gaps = 7/350 (2%) Query: 24 NTLLLQRLIQTMTTLSTRLGSSISAASADNAERQAIGRLLKNAAITEENVLDCYRLETIR 83 +T L RL+ +L S+ A ++ +A R N +T E + D +R TI Sbjct: 29 DTRLTHRLVSLAASLIEHPEKSLPEALGQWSDVKAAYRFFDNEKVTVEAIYDVHRKATIE 88 Query: 84 QMKETGEQVFLCVQDTTGVSYGQRDKTTGLGQYTTSNTKGLLTHSAVVFTTTGLPLGLLY 143 ++K + V L +QDTT +Y +T GLG + G HS + + G+PLG+L Sbjct: 89 KIK--NQPVVLAIQDTTIFNYTLHRETKGLGPIGQAGLSGFFLHSCLAASAEGVPLGILA 146 Query: 144 QKIWAREPQAKGKRKVSRPYEEKENYRWTEXXXXXXXXXXXXLKLIHIGDREADFFEFLV 203 ++W R + K K RP E+KE+ RW + K++ +GDRE+D F+ + Sbjct: 147 HRLWVRSLEPKEKTHKKRPIEDKESVRWIDVTREVAETVSPFTKVVMVGDRESDIFDLFL 206 Query: 204 QLQQDGQSYVVRSMQNRITEDGGERLWDKVRAQPAAGEIRVSLPRDTRRGTPARE-TTLA 262 + +VR+ NR + + LW V + P G +++PR +R P RE L Sbjct: 207 LASANQYDILVRAAWNRRIDQSHDYLWPVVESAPVLGRTVINIPRADKR--PEREAVVLT 264 Query: 263 LRFTSSTVQVPIHLQQKGADYSPLSCTLIHVVEVTPLEGQAPIEWFLVTNVSTTNADEAA 322 L+ + T++ P H ++ L+ L+ E +P EG+ PIEW L+T + T D+A Sbjct: 265 LQAATVTLKPPKHRGKEKLAAPTLNALLVQ--EQSPPEGEKPIEWMLLTTLPVTTIDDAL 322 Query: 323 EKVAWYVQRWKMERFHYILKNGCEVEKLQEHQADRLQKLILFYSIIALQI 372 + + WY RW++ER+HYILK+GC+VEKLQ DRL + I YS++A Q+ Sbjct: 323 QCLTWYTYRWRIERYHYILKSGCQVEKLQLETKDRLMRAIAVYSMVASQL 372 >C1TIR9.1 C1TIR9_9FIRM Putative uncharacterized protein Length = 467 Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/350 (32%), Positives = 182/350 (52%), Gaps = 7/350 (2%) Query: 24 NTLLLQRLIQTMTTLSTRLGSSISAASADNAERQAIGRLLKNAAITEENVLDCYRLETIR 83 +T L RL+ + +L S+ A ++ +A R N +T E + D +R TI Sbjct: 29 DTRLTHRLVSLVASLIEHPEKSLPEALGQWSDVKAAYRFFDNEKVTVEAIYDAHRKATIE 88 Query: 84 QMKETGEQVFLCVQDTTGVSYGQRDKTTGLGQYTTSNTKGLLTHSAVVFTTTGLPLGLLY 143 ++K + V L +QDTT +Y + GLG + G HS + + G+PLG+L Sbjct: 89 KIK--NQPVVLAIQDTTIFNYTLHREIKGLGPIGQAGLSGFFLHSCLAASAEGVPLGILA 146 Query: 144 QKIWAREPQAKGKRKVSRPYEEKENYRWTEXXXXXXXXXXXXLKLIHIGDREADFFEFLV 203 ++W R + K K RP E+KE+ RW + K++ +GDRE+D F+ + Sbjct: 147 HRLWVRSLEPKEKTHKKRPIEDKESVRWIDVTREVAETVSPFTKVVMVGDRESDIFDLFL 206 Query: 204 QLQQDGQSYVVRSMQNRITEDGGERLWDKVRAQPAAGEIRVSLPRDTRRGTPARE-TTLA 262 + +VR+ N + + LW V + PA G +++PR +R P R+ L Sbjct: 207 LASANQYDILVRAAWNCRIDQSHDYLWPVVESAPALGRTVINIPRADKR--PERKAVVLT 264 Query: 263 LRFTSSTVQVPIHLQQKGADYSPLSCTLIHVVEVTPLEGQAPIEWFLVTNVSTTNADEAA 322 L+ + T++ P H ++ L+ L+H E +P EG+ PIEW L+T + T D+A Sbjct: 265 LQAATVTLKPPKHRGKEKLAAPTLNALLVH--EQSPPEGEKPIEWMLLTTLPVTTIDDAL 322 Query: 323 EKVAWYVQRWKMERFHYILKNGCEVEKLQEHQADRLQKLILFYSIIALQI 372 + + W RW++ER+HYILK+GC+VEKLQ DRL + I YS++A Q+ Sbjct: 323 QYLTWDTYRWRIERYHYILKSGCQVEKLQLETKDRLMRAIAVYSMVASQL 372 >Q5ZTU2.1 Q5ZTU2_LEGPH Transposase Tn5 Length = 483 Score = 199 bits (506), Expect = 4e-49, Method: Compositional matrix adjust. Identities = 122/370 (32%), Positives = 190/370 (51%), Gaps = 28/370 (7%) Query: 27 LLQRLIQTMTTLSTRLGSSISAASADNAERQAIGRLLKNAAITEENVLDCYRLETIRQMK 86 L +RL++ + + SI+ A D + +A R +N A++E +LD + +TI + K Sbjct: 28 LSKRLLKIADSFANSPECSINRACDDWHQSKAAYRFFQNDAVSERKILDSHITKTIERAK 87 Query: 87 ETGEQVFLCVQDTTGVSYGQRDKTTGLG--------QYTTSNTKGLLTHSAVVFTTTGLP 138 L +QDT+ +SY KT GLG + T T GL+ H+ TT GLP Sbjct: 88 NY--PTILAIQDTSYISYKNHKKTEGLGIIAARVRSKTTNFQTHGLVMHTTFAVTTEGLP 145 Query: 139 LGLLYQKIWAR-------EPQAKGKRKVSRPYEEKENYRWTEXXXXXXXXXX-XXLKLIH 190 +GLL QKI +R + K ++ P EEKE+ RW E K++ Sbjct: 146 IGLLDQKISSRPLLDETVKELKKRSHNIALPIEEKESMRWIESLEHSNNYPDLKNAKVVT 205 Query: 191 IGDREADFFEFLVQLQQDGQSYVVRSMQNRI-------TEDGGERLWDKVRAQPAAGEIR 243 + DREAD ++ + +VVR+ Q+R ++ GE+LWD V P GEI+ Sbjct: 206 VCDREADIYDLFEVASTNQCPFVVRARQDRTVNKTSIYSKKSGEKLWDLVSGSPCRGEIQ 265 Query: 244 VSLPRDTRRGTPARETTLALRFTSSTVQVPIH-LQQKGADYSPLSCTLIHVVEVTPLEGQ 302 V++P R P R TL +RF + P + +++K L ++V+E +P G+ Sbjct: 266 VTIP--ARDNKPKRTATLEVRFDHFVMNPPKNNVKRKTRTLPDLKLNAVYVIEQSPPLGE 323 Query: 303 APIEWFLVTNVSTTNADEAAEKVAWYVQRWKMERFHYILKNGCEVEKLQEHQADRLQKLI 362 P+ W L+TN+ N +EA EK+ WY RW++E FH ILK+G +VE+ + ADRL + + Sbjct: 324 EPMNWMLLTNIDINNFEEAVEKIQWYCLRWRIEIFHKILKSGFKVEECRLGAADRLVRFL 383 Query: 363 LFYSIIALQI 372 S+IA +I Sbjct: 384 TIMSVIAWRI 393 >B4VK20.1 B4VK20_9CYAN Putative uncharacterized protein Length = 463 Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 8/356 (2%) Query: 29 QRLIQTMTTLSTRLGSSISAASADNAERQAIGRLLKNAAITEENVLDCYRLETIRQMKET 88 +RL++ + L+ + SI A + A +A L K+ I +++ +++ T+ + +E Sbjct: 32 KRLVKIVEDLAAQPNESIPTACGNWAATKATYNLWKSPRIKPDDIRLSHQISTVERSQE- 90 Query: 89 GEQVFLCVQDTTGVSYGQRDKTTGLGQYTTSN-TKGLLTHSAVVFTTTGLPLGLLYQKIW 147 V L +QDTT +++ G+G ++ GL HS + +T G+PLG+L+Q++W Sbjct: 91 -HSVVLAIQDTTDLNFTHHPSKKGMGPISSKPMVTGLKVHSVLAVSTLGVPLGVLHQQVW 149 Query: 148 AREPQAKGKRKVSRPYE--EKENYRWTEXXXXXXXXXXXXLKLIHIGDREADFFEFLVQL 205 AR PQ GKR R + +KE+ W ++++ I DREAD ++ Sbjct: 150 ARNPQEVGKRHTRRQRQTADKESQCWLSASVATELALPEDIEVVTIADREADIYDLFAMT 209 Query: 206 QQDGQSYVVRSMQNRITEDGGERLWDKVRAQPAAGEIRVSLPRDTRRGTPARETTLALRF 265 +Q ++R NR + + L + P AG + +++PR+ +R P R+ TL +RF Sbjct: 210 RQRRSHLLIRGTHNRRVDHQAKYLHASIEQAPVAGLVTITVPRNGQR--PQRQATLTVRF 267 Query: 266 TSSTVQVPIHLQQKGADYSPLSCTLIHVVEVTPLEGQAPIEWFLVTNVSTTNADEAAEKV 325 + +Q P H Q+ A SP++ ++ E P + PI W L+T + + DEA + + Sbjct: 268 ATLEIQPPRHHLQR-AKLSPVTLQVVLATESHPPKDTTPICWLLLTTLPVNSFDEAVQCI 326 Query: 326 AWYVQRWKMERFHYILKNGCEVEKLQEHQADRLQKLILFYSIIALQIXXXXIDSKS 381 WY RW +ER+HY+LK+GC +E+LQ +R++ + YSI+A ++ ++S Sbjct: 327 RWYSFRWLIERYHYVLKSGCHLEQLQLETRERIECALATYSIVAWRLLWLTYQARS 382 >B4VVQ9.1 B4VVQ9_9CYAN Putative uncharacterized protein Length = 454 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 105/356 (29%), Positives = 188/356 (52%), Gaps = 8/356 (2%) Query: 29 QRLIQTMTTLSTRLGSSISAASADNAERQAIGRLLKNAAITEENVLDCYRLETIRQMKET 88 +RL++ + L+ + SI A + A +A L K+ I +++ +++ T+ + +E Sbjct: 23 KRLVKIVEDLAAQPNESIPTACGNWAATKATYNLWKSPRIKPDDIRLSHQISTVERSQE- 81 Query: 89 GEQVFLCVQDTTGVSYGQRDKTTGLGQYTTSN-TKGLLTHSAVVFTTTGLPLGLLYQKIW 147 V L +QDTT +++ G+G ++ GL HS + +T G+PLG+L+Q++W Sbjct: 82 -HSVVLAIQDTTDLNFTHHPSKKGMGPISSKPMVTGLKVHSVLAVSTLGVPLGVLHQQVW 140 Query: 148 AREPQAKGKRKVSRPYE--EKENYRWTEXXXXXXXXXXXXLKLIHIGDREADFFEFLVQL 205 AR PQ GKR R + +KE+ W ++++ I DREAD ++ Sbjct: 141 ARNPQEVGKRHTRRQRQTADKESQCWLSASVATELALPEDIEVVTIADREADIYDLFAMT 200 Query: 206 QQDGQSYVVRSMQNRITEDGGERLWDKVRAQPAAGEIRVSLPRDTRRGTPARETTLALRF 265 +Q ++R NR + + L + P AG + +++PR+ +R P R+ TL +RF Sbjct: 201 RQRRSHLLIRGTHNRRVDHQAKYLHASIEQAPVAGLVTITVPRNGQR--PQRQATLTVRF 258 Query: 266 TSSTVQVPIHLQQKGADYSPLSCTLIHVVEVTPLEGQAPIEWFLVTNVSTTNADEAAEKV 325 + +Q P H Q+ A SP++ ++ E P + PI W L+T + + DEA + + Sbjct: 259 ATLEIQPPRHHLQR-AKLSPVTLQVVLATESHPPKDTTPICWLLLTTLPVNSFDEAVQCI 317 Query: 326 AWYVQRWKMERFHYILKNGCEVEKLQEHQADRLQKLILFYSIIALQIXXXXIDSKS 381 WY RW +ER+HY+LK+GC +E+LQ +R++ + YSI+A ++ ++S Sbjct: 318 RWYSFRWLIERYHYVLKSGCHLEQLQLETRERIECALATYSIVAWRLLWLTYQARS 373 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.131 0.379 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,009,481,554 Number of extensions: 78251316 Number of successful extensions: 175781 Number of sequences better than 1.0e-05: 220 Number of HSP's gapped: 175303 Number of HSP's successfully gapped: 223 Length of query: 381 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 244 Effective length of database: 1,770,017,148 Effective search space: 431884184112 Effective search space used: 431884184112 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)