BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0065.p (365 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG67.1 B3KG67_9BACI Putative uncharacterized protein 313 2e-83 B1DBW2.1 B1DBW2_9BACL Putative uncharacterized protein 285 7e-75 C0ZGD5.1 C0ZGD5_BREBN Putative uncharacterized protein 157 2e-36 >B3KG67.1 B3KG67_9BACI Putative uncharacterized protein Length = 370 Score = 313 bits (802), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 155/332 (46%), Positives = 225/332 (67%) Query: 32 PDMPDNEETRRLLEQTLSSAEIEQEIGRISSEQKALEQQASMLEKRASAQKNAITDQQER 91 P MPD+EE R+LLE +LS EI+ EI RI+ + L+ + L+ + I D++ R Sbjct: 37 PVMPDSEEARKLLEDSLSIVEIDHEIERITKRMEELQTLQNELQTQIQDMGLRIEDRRAR 96 Query: 92 AGAIIRSYYMGERDGLLAAVLSAKSISRLLALYDYYEIVIGRDQDILSQYEEEYKKLKAT 151 A A++RSYYMGERD L +LSAK ++ + D+Y+I+I D+D L+ Y +Y+ L + Sbjct: 97 AAAVLRSYYMGERDNLFFMLLSAKDLASFFRVMDFYDIIIQNDRDTLTVYNNQYRSLASA 156 Query: 152 LTAAQRSTQELAELKAVLEEQKARMAILNEDIESGIQSSSDPARMSALLEEFTKYWENIG 211 A R+ +LAE+K L EQ+ R+ L + ++ + S +P M L+EEFT YWEN+G Sbjct: 157 QAEAARNASQLAEVKDSLVEQRERVLALEQQVDGALTDSGNPDAMKRLIEEFTLYWENVG 216 Query: 212 IHEVKTYFKALSSAMKHLPQFVQSRDGILTRKGMTYHLALKEEDLNEFLVSQNPLFQDFA 271 ++EVK +F+AL+SAM++LP FVQ IL G Y + + E+DLN FL S++ +F FA Sbjct: 217 LYEVKRHFQALASAMENLPSFVQGSKNILKTNGKVYTIDIHEDDLNTFLRSEDEIFNSFA 276 Query: 272 FHFNNNEVTASGKSGGLSMTLTGHYTIQEEPVNGLMFHVDHVLFNGLELPDTTRKALEEE 331 FHF++ +V ASG+SG LS+ + G YT+ EP N +MF VD ++FN LELPDTTR+AL+EE Sbjct: 277 FHFDDGKVIASGESGNLSLLIEGKYTVINEPENAIMFEVDKLVFNRLELPDTTRRALQEE 336 Query: 332 FDLGFYPEKIVSFLRATEVSSADGVLHVKLSL 363 FD+ FYP+++VSFL+ATEV+S D L VK+ L Sbjct: 337 FDMNFYPKQLVSFLKATEVASDDQRLVVKMEL 368 >B1DBW2.1 B1DBW2_9BACL Putative uncharacterized protein Length = 366 Score = 285 bits (728), Expect = 7e-75, Method: Compositional matrix adjust. Identities = 142/365 (38%), Positives = 220/365 (60%), Gaps = 13/365 (3%) Query: 1 MLLILLCFTVLPLTPPAFLSADPGTGLTAAPPDMPDNEETRRLLEQTLSSAEIEQEIGRI 60 +LLI+L + L A P + ++E+ ++LE++LS EI++EI RI Sbjct: 15 ILLIVLMLAICKLP-------------VMAEPQLTEDEQVNQILEKSLSIVEIDKEIARI 61 Query: 61 SSEQKALEQQASMLEKRASAQKNAITDQQERAGAIIRSYYMGERDGLLAAVLSAKSISRL 120 +E++ + S+ +KR + I +++E AG ++R+YYMGER+ LL A+LS SI L Sbjct: 62 QTEKEKVIDDMSVTDKRIVQRDQEIMEKREEAGKVLRAYYMGEREILLRAILSFDSIHDL 121 Query: 121 LALYDYYEIVIGRDQDILSQYEEEYKKLKATLTAAQRSTQELAELKAVLEEQKARMAILN 180 A+ DY +I+ +D++ L Y +EYK LK EL +++ L+ Q++R+A L Sbjct: 122 FAMLDYVDIIFSQDRNTLDSYTKEYKSLKEEYAKLDGRKTELEDIENRLQTQRSRVAQLE 181 Query: 181 EDIESGIQSSSDPARMSALLEEFTKYWENIGIHEVKTYFKALSSAMKHLPQFVQSRDGIL 240 + I+ + SD R+ L++E T YWE+ G+ EV+ YF ALS AM LP +++ L Sbjct: 182 QQIDGQLAGRSDADRLRLLMQELTNYWESAGLEEVEQYFDALSKAMNKLPSWIEDNKQYL 241 Query: 241 TRKGMTYHLALKEEDLNEFLVSQNPLFQDFAFHFNNNEVTASGKSGGLSMTLTGHYTIQE 300 G Y + + E+ LN FL Q+ F DF+F F + +VTASGK + + ++GHYT++E Sbjct: 242 EINGFNYTIHIPEDALNAFLREQDKRFNDFSFRFEDGKVTASGKHDNMDIAVSGHYTVEE 301 Query: 301 EPVNGLMFHVDHVLFNGLELPDTTRKALEEEFDLGFYPEKIVSFLRATEVSSADGVLHVK 360 +P NG++FHVD +LFNG LPDTTRK+LE++FDLGFYP I+ F++A V D L V Sbjct: 302 KPKNGIVFHVDELLFNGFALPDTTRKSLEDKFDLGFYPGDIIKFIQAKSVEMKDKELTVY 361 Query: 361 LSLSF 365 L + Sbjct: 362 LKMKL 366 >C0ZGD5.1 C0ZGD5_BREBN Putative uncharacterized protein Length = 357 Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 104/363 (28%), Positives = 183/363 (50%), Gaps = 17/363 (4%) Query: 2 LLILLCFTVLPLTPPAFLSADPGTGLTAAPPDMPDNEETRRLLEQTLSSAEIEQEIGRIS 61 +L++L V PLT F +P T L EE +L+Q + E+E+ + + Sbjct: 4 ILLVLFLLVCPLT--VFAQEEPATSL----------EEL--ILQQHFTQKELERTLTLLK 49 Query: 62 SEQKALEQQASMLEKRASAQKNAITDQQERAGAIIRSYYMGERDGLLAAVLSAKSISRLL 121 E+ + + ++ QK + Q RAG + R+YYMGER LL +L+A++ ++ L Sbjct: 50 EEETRTYGEIAQMDLDLQRQKLVMEATQRRAGEVARAYYMGERTNLLTLLLNAENFNQFL 109 Query: 122 ALYDYYEIVIGRDQDILSQYEEEYKKLKATLTAAQRSTQELAELKAVLEEQKARMAILNE 181 +YD+YEI+ RD L Y E KL A T + ++L L+ E Q + M + Sbjct: 110 LMYDFYEILYERDMSRLETYHTERTKLTAMQTDKKNRLEQLQALRKKYELQLSEMLAIAA 169 Query: 182 DIESGIQSSSDPARMSALLEEFTKYWENIGIHEVKTYFKALSSAMKHLPQFVQSRDGILT 241 + E +Q DP + +++ WE G+ +T+F L+ M +P+ + D I + Sbjct: 170 EKEKNVQKLDDPTVVESMMNHLILDWEKRGLPAFQTFFGMLAQVMVQVPELA-TPDRISS 228 Query: 242 RKGMTYHLALKEEDLNEFLVSQNPLFQDFAFHFNNNEVTASGKSGGLSMTLTGHYTIQEE 301 + + L + + D N FL+ ++ LF+ F F +N++T G + + L G+Y + Sbjct: 229 EGLLKHTLTINQTDFNNFLIEKDALFKQSHFSFEDNKLTVEGTYDQMELKLVGNYELV-S 287 Query: 302 PVNGLMFHVDHVLFNGLELPDTTRKALEEEFDLGFYPEKIVSFLRATEVSSADGVLHVKL 361 P + L FH+ + F+G LP +T + +E+ +DLGFYPE I ++ ++ D L ++L Sbjct: 288 PTH-LKFHITELYFDGFALPPSTVEEMEKAYDLGFYPELISPNIQVQGITLMDEELKLQL 346 Query: 362 SLS 364 + Sbjct: 347 QFN 349 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.358 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,969,339,683 Number of extensions: 77584111 Number of successful extensions: 363837 Number of sequences better than 1.0e-05: 4 Number of HSP's gapped: 363989 Number of HSP's successfully gapped: 4 Length of query: 365 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 228 Effective length of database: 1,770,017,148 Effective search space: 403563909744 Effective search space used: 403563909744 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)