BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0061.p (571 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG73.1 B3KG73_9BACI Extracellular solute-binding protein family 5 595 e-168 B1DEI5.1 B1DEI5_9BACL Extracellular solute-binding protein family 5 561 e-158 C0ZJZ4.1 C0ZJZ4_BREBN Probable oligopeptide ABC transporter subs... 462 e-128 C0ZJZ5.1 C0ZJZ5_BREBN Probable oligopeptide ABC transporter subs... 461 e-128 C0ZJZ3.1 C0ZJZ3_BREBN Probable oligopeptide ABC transporter subs... 451 e-124 >B3KG73.1 B3KG73_9BACI Extracellular solute-binding protein family 5 Length = 463 Score = 595 bits (1535), Expect = e-168, Method: Compositional matrix adjust. Identities = 277/462 (59%), Positives = 357/462 (77%), Gaps = 1/462 (0%) Query: 108 IAEKWEVSADGLVYTFHLR-DAQWSNGDPVEAADFVRGWKIVLDPNTNPTAPYAYQLYYL 166 +AEKW++S DGL Y F LR DA+WSNGDPV A DF WK VLDPN P +PYAYQLYY+ Sbjct: 1 MAEKWDISEDGLKYVFTLRQDAKWSNGDPVTAKDFEYAWKRVLDPNFTPASPYAYQLYYI 60 Query: 167 KNAEEYYTKKVTDFSQVGVKAVDAKTLEVTLKAPTPYFLGLLSFYTYYPVHKSVEGNPKW 226 KNAE Y ++ D ++VGVKA D TLEVTL+ PTPYFL L+SF TY+PVH SVEGN W Sbjct: 61 KNAEAYNLGEIKDANEVGVKATDDYTLEVTLENPTPYFLSLMSFQTYFPVHSSVEGNASW 120 Query: 227 ATNKDTMITNGAFTLTEWTTGQAIQVTKNEKYWDAASIKLSKIDFSIVNSGATELLSYKN 286 AT DT+I NG F +++ T GQ I++ KN++YWD SIKL K+ SIVNS ATEL SY+N Sbjct: 121 ATKPDTLIGNGPFKVSQMTKGQKIELVKNDQYWDKDSIKLEKVQMSIVNSSATELSSYRN 180 Query: 287 GELDRAGNPNGEIPSEQLPIVKKELPNEFVSKGIAATYYYYFNTTEKPFSNVKIRKALTM 346 ELD AG+P G IP++QL +KKEL +E + KGI++TY+Y FNTTE+PF NV IRKA +M Sbjct: 181 DELDYAGHPTGNIPTDQLTAIKKELGDELMIKGISSTYFYIFNTTEEPFDNVNIRKAFSM 240 Query: 347 AINRQALIDNITLGGQLPAFGLVPPGIAGVDGEYRNTIKDSYFTEDVEQAKTLLAEGLKE 406 AI+R+A+++ IT GGQLPA+G VPPGI G EYRN + D+YF E++E+AK LL +G+KE Sbjct: 241 AIDRKAIVEKITQGGQLPAYGFVPPGIKGESDEYRNEVPDTYFQENLEEAKKLLEQGMKE 300 Query: 407 EGLTALPPVELSYNTSENHKKIALAIADMWKNSLGITVNTVNQEWAVFIDNRQNQNYQIA 466 +G T +P V L +N+ +NHKKIALAIADMWKN+LG+TV NQEW VF+ NR + NYQ+A Sbjct: 301 KGYTTMPEVTLIHNSDDNHKKIALAIADMWKNNLGVTVKVQNQEWGVFLKNRDDLNYQVA 360 Query: 467 RAGWTADYNDPMTFLDMFVTGGGNNDAGYANPEYDKLIADAKASTDLAKRQEDFAAAEKM 526 R+GW ADYNDPMT++DM+ + GGNND G+ N EYDKL+ DA A++D AKR E + AEK+ Sbjct: 361 RSGWGADYNDPMTYIDMWTSNGGNNDTGFKNEEYDKLVKDAYATSDNAKRMELMSQAEKI 420 Query: 527 LIQDDMVIMPIYYYTNNSLTKEYLKGVTLDFSGAVDFTRGYL 568 L++D+ V+MPIYYY++ SL K ++K + LD+ G +DFTR Y+ Sbjct: 421 LVEDNQVVMPIYYYSSVSLVKPWVKNLHLDYKGDIDFTRAYI 462 >B1DEI5.1 B1DEI5_9BACL Extracellular solute-binding protein family 5 Length = 547 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 276/510 (54%), Positives = 360/510 (70%), Gaps = 7/510 (1%) Query: 62 LRVNLTSEPPTFDPAQAQDSQANTVLKTMYEGLTRMNDETGQAEPGIAEKWEVSADGLVY 121 R+NL +EPP+ DPAQ QD + TV+ ++EGLT + +E G+ EP +A++W++S DG Y Sbjct: 37 FRMNLATEPPSLDPAQVQDQVSATVVNGLFEGLT-LKNEKGEVEPAVAKEWKISDDGKTY 95 Query: 122 TFHLRD-AQWSNGDPVEAADFVRGWKIVLDPNTNPTAP-YAYQLYYLKNAEEYYTKK--V 177 TF +RD A+WSNGDPV A DF WK LDPN P A YAYQLYY+KNAE Y T V Sbjct: 96 TFTIRDDAKWSNGDPVTAGDFEYAWKRALDPNLKPAASAYAYQLYYIKNAEAYNTAADGV 155 Query: 178 TDFSQVGVKAVDAKTLEVTLKAPTPYFLGLLSFYTYYPVHKSVEGNPKWATNKDTMITNG 237 T VGVKAVD TL+V L APTPYFLGL+SF +YPVHKSV+ N +WAT+ T+++NG Sbjct: 156 T-ADDVGVKAVDDHTLQVELNAPTPYFLGLMSFTVFYPVHKSVKENEQWATDVSTLVSNG 214 Query: 238 AFTLTEWTTGQAIQVTKNEKYWDAASIKLSKIDFSIVNSGATELLSYKNGELDRAGNPNG 297 F ++EW +I + KN+ Y+ IKLSK+ FS VN TEL Y+ GELD AG P G Sbjct: 215 PFKMSEWKKNNSITIAKNDNYYAKDDIKLSKVVFSEVNDSNTELSMYQTGELDYAGMPTG 274 Query: 298 EIPSEQLPIVKKELPNEFVSKGIAATYYYYFNTTEKPFSNVKIRKALTMAINRQALIDNI 357 IP+EQ P +K+ P+EF +G A+ YYY FNTT+KP+ N KIR+AL+MAI+RQ ++DN+ Sbjct: 275 LIPNEQFPTLKQNNPDEFKIQGSASIYYYLFNTTQKPYDNEKIRQALSMAISRQDIVDNV 334 Query: 358 TLGGQLPAFGLVPPGIAGVDGEYRNTIKDSYFTEDVEQAKTLLAEGLKEEGLTALPPVEL 417 T G Q PA+G+VPPGI G +YR DSYF EDVE+AK LLAEGLKEEGLTA+P V++ Sbjct: 335 TKGEQKPAYGIVPPGIKGEKEDYRTEHPDSYFKEDVEEAKKLLAEGLKEEGLTAMPTVKV 394 Query: 418 SYNTSENHKKIALAIADMWKNSLGITVNTVNQEWAVFIDNRQNQNYQIARAGWTADYNDP 477 +YNT+E H+ +A AIA+MW +LGI QEW VF+DNR + NY +AR GW ADY+DP Sbjct: 395 TYNTNELHQAVAEAIAEMWSKNLGIKTEVSKQEWGVFLDNRNHLNYDVARGGWGADYDDP 454 Query: 478 MTFLDMFVTGGGNNDAGYANPEYDKLIADAKASTDLAKRQEDFAAAEKMLIQDDMVIMPI 537 MTF+D+F + GNN+ G+AN EYD LI +A ++ D AKR E + AE ++I IMPI Sbjct: 455 MTFIDLFSSKSGNNNTGFANKEYDALIKEAYSTDDQAKRMEAMSKAESLVI-GTRAIMPI 513 Query: 538 YYYTNNSLTKEYLKGVTLDFSGAVDFTRGY 567 YYY+ + K KG+ +D+ G +D+ RGY Sbjct: 514 YYYSTVYMIKPGFKGIFIDYKGDIDYNRGY 543 >C0ZJZ4.1 C0ZJZ4_BREBN Probable oligopeptide ABC transporter substrate binding protein Length = 549 Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust. Identities = 246/533 (46%), Positives = 342/533 (64%), Gaps = 18/533 (3%) Query: 41 PSNEGSTNTGTGDEKLAADQTLRVNLTSEPPTFDPAQAQDSQANTVLKTMYEGLTRMNDE 100 P++ ++ T + A + L++NL SEPPT DP A+D+ ++T++ +EGLTR+ + Sbjct: 30 PADNNASGAKTENSAPAGSKVLKLNLHSEPPTADPGIAEDTTSSTIITATFEGLTRVGKD 89 Query: 101 TGQAEPGIAEKWEVSADGLVYTFHLRDAQWSNGDPVEAADFVRGWKIVLDPNTNPTAPYA 160 G+ P AE + VS DG YTF +RD +WSNGDPV A DF WK L+P T + YA Sbjct: 90 -GKYNPAAAESYTVSEDGKKYTFKIRDNKWSNGDPVSAKDFEYAWKRALNPKT--ASNYA 146 Query: 161 YQLYYLKNAEEYYTKKVTDFSQVGVKAVDAKTLEVTLKAPTPYFLGLLSFYTYYPVH-KS 219 YQLYY+K AE Y K VGVKA+D KTLEV L PTP+FL L++F TY+PV+ K Sbjct: 147 YQLYYVKGAEAY-NKGKGKVEDVGVKAIDDKTLEVELANPTPFFLELVAFKTYFPVNPKV 205 Query: 220 VEGNPKWATNKDTMITNGAFTLTEWTTGQAIQVTKNEKYWDAASIKLSKIDFSIVNSGAT 279 V+GN KWAT+ T++ NG F + W + V+KN+ YWD ++KL KI+FS+V T Sbjct: 206 VDGNEKWATDAKTVVGNGPFKMDSWEHKSKLVVSKNDNYWDKDNVKLDKIEFSMVEDENT 265 Query: 280 ELLSYKNGELDRAGNPNGEIPSEQLPIVKKELPNEFVSKGIAATYYYYFNTTEKPFSNVK 339 EL ++NGEL AG+P +P++ +P +K + ++ IA TY+Y FNT + PF+N K Sbjct: 266 ELSMFENGELHWAGSPTSALPTDAIPALKDS--GKMTTQPIAGTYFYRFNTEKPPFNNAK 323 Query: 340 IRKALTMAINRQALIDNITLGGQLPAFGLVPPGIAGVDGEYRNTIKDSYFTE-DVEQAKT 398 IRKA T AI+RQ+LIDNI GQLPA G VPP +A KD ++ + D+E AK Sbjct: 324 IRKAFTYAIDRQSLIDNILQAGQLPATGYVPPSMA--------LTKDGFYKDNDIEAAKK 375 Query: 399 LLAEGLKEEGLTALPPVELSYNTSENHKKIALAIADMWKNSLGITVNTVNQEWAVFIDNR 458 +L EG+KEEGLT P + LS+NTSE HKKIA AI D WK +LG+ V N+EW V++D+ Sbjct: 376 MLEEGMKEEGLTKFPALTLSFNTSEGHKKIAEAIQDQWKKNLGVDVKLENKEWKVYLDDV 435 Query: 459 QNQNYQIARAGWTADYNDPMTFLDMFV-TGGGNNDAGYANPEYDKLIADAKASTDLAKRQ 517 YQ+ARAGW D+NDP+ FL+MF GGNND + NP+Y +L+ + D KR+ Sbjct: 436 HQGKYQVARAGWLGDFNDPINFLEMFKEKDGGNNDTRWENPKYKELLNQSALEQDPEKRK 495 Query: 518 EDFAAAEKMLIQDDMVIMPIYYYTNNSLTKEYLKGVTLDFSGAVDFTRGYLLE 570 A AE++L+ D+M IMPIY+YT + + + ++ V +D GAVD+ +E Sbjct: 496 AILAQAEQILM-DEMPIMPIYFYTQSWVKDDRVQDVIIDGLGAVDYKYADFVE 547 >C0ZJZ5.1 C0ZJZ5_BREBN Probable oligopeptide ABC transporter substrate binding protein Length = 531 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 244/523 (46%), Positives = 331/523 (63%), Gaps = 19/523 (3%) Query: 45 GSTNTG-TGDEKLAADQTLRVNLTSEPPTFDPAQAQDSQANTVLKTMYEGLTRMNDETGQ 103 G TG G + A + LR+NL SEPPT DP A+D+ + T++ ++EGLTR+ + G+ Sbjct: 16 GGMMTGYEGAVQAAEPKVLRMNLQSEPPTADPGIAEDTTSGTIITAIFEGLTRLGKD-GE 74 Query: 104 AEPGIAEKWEVSADGLVYTFHLRDAQWSNGDPVEAADFVRGWKIVLDPNTNPTAPYAYQL 163 P AE + VS DG YTF +R+A+WSNGDPV A DF WK VLDP + YAYQL Sbjct: 75 VHPAAAESYTVSKDGKTYTFKIREAKWSNGDPVTAHDFEYAWKRVLDPKI--ASNYAYQL 132 Query: 164 YYLKNAEEYYTKKVTDFSQVGVKAVDAKTLEVTLKAPTPYFLGLLSFYTYYPVHKSV-EG 222 YY+ AE++ K + VGVKA+D KTLEV L PTP+F L++F TY+PV+K V EG Sbjct: 133 YYVTGAEDF-NKGIGKAGDVGVKAIDDKTLEVELTNPTPFFPELVAFKTYFPVNKKVVEG 191 Query: 223 NPKWATNKDTMITNGAFTLTEWTTGQAIQVTKNEKYWDAASIKLSKIDFSIVNSGATELL 282 N KWA T+++NG F + W + V KNEKYWD A++KL KI+F++V TEL Sbjct: 192 NRKWADEAKTVVSNGPFKMETWEHKSKLSVVKNEKYWDKANVKLDKIEFTMVEDENTELA 251 Query: 283 SYKNGELDRAGNPNGEIPSEQLPIVKKELPNEFVSKGIAATYYYYFNTTEKPFSNVKIRK 342 + N E+D AG P +P + LP++++ ++ IA Y+Y FNT + PF+N KIRK Sbjct: 252 MFDNDEIDWAGAPTSGLPMDALPVLRE--AGILKTQPIAGAYFYRFNTEQAPFTNAKIRK 309 Query: 343 ALTMAINRQALIDNITLGGQLPAFGLVPPGIAGVDGEYRNTIKDSYFTE-DVEQAKTLLA 401 A AINR+++ +I GQ+PA G VPP +A KD YF + D+E AK LL Sbjct: 310 AFAYAINRESITADILQAGQVPATGYVPPSMA--------LNKDGYFKDSDLEVAKKLLV 361 Query: 402 EGLKEEGLTALPPVELSYNTSENHKKIALAIADMWKNSLGITVNTVNQEWAVFIDNRQNQ 461 EG+KEEG++ LPP+ LSYNTSE HKKIA I WK +LG+ + N EW V++D+ Sbjct: 362 EGMKEEGISKLPPITLSYNTSEGHKKIAKEIQAQWKKNLGVDIKLKNSEWKVYLDDVHQG 421 Query: 462 NYQIARAGWTADYNDPMTFLDMFV-TGGGNNDAGYANPEYDKLIADAKASTDLAKRQEDF 520 NYQIAR GW D+NDP+ FL+MF GGNND + NP+Y +L+ + D AKR+ Sbjct: 422 NYQIARGGWLGDFNDPINFLEMFQEKDGGNNDTRWENPKYKELLNQSALEQDPAKRKAIL 481 Query: 521 AAAEKMLIQDDMVIMPIYYYTNNSLTKEYLKGVTLDFSGAVDF 563 AE++L+ D+M IMPIY+Y N+ + E LK V +D G +DF Sbjct: 482 MEAEQILM-DEMPIMPIYFYVNSWVQNENLKDVVIDGLGDIDF 523 >C0ZJZ3.1 C0ZJZ3_BREBN Probable oligopeptide ABC transporter substrate binding protein Length = 541 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 245/512 (47%), Positives = 330/512 (64%), Gaps = 16/512 (3%) Query: 54 EKLAADQTLRVNLTSEPPTFDPAQAQDSQANTVLKTMYEGLTRMNDETGQAEPGIAEKWE 113 E+ + + LR+N+ SEPPT DPA A+DS ++ VL+ ++GLTR+ E G+ P +AEK + Sbjct: 38 EQTSGPKELRMNMMSEPPTADPALAEDSTSSAVLRATFDGLTRIG-EDGKPHPSVAEKID 96 Query: 114 VSADGLVYTFHLRDAQWSNGDPVEAADFVRGWKIVLDPNTNPTAPYAYQLYYLKNAEEYY 173 VS DGL YTF LRD++WSNG+PV A DF WK L+P T A Y+YQLYYLKNAEEY Sbjct: 97 VSEDGLTYTFTLRDSKWSNGEPVTAKDFEYAWKRALNPKT--AANYSYQLYYLKNAEEY- 153 Query: 174 TKKVTDFSQVGVKAVDAKTLEVTLKAPTPYFLGLLSFYTYYPV-HKSVEGNPKWATNKDT 232 K VGVKA D KTL VTLK PTP+FL L +FYTYYPV K VEG+ KWA T Sbjct: 154 NKGKAKADDVGVKAKDDKTLVVTLKNPTPFFLELTAFYTYYPVNQKVVEGSDKWAGEAKT 213 Query: 233 MITNGAFTLTEWTTGQAIQVTKNEKYWDAASIKLSKIDFSIVNSGATELLSYKNGELDRA 292 + NG F + W + + K++ YWD ++KL K++FS+V TEL + N +LD + Sbjct: 214 HVGNGPFKMETWEHKSKLVLVKSDTYWDKDAVKLDKLNFSMVEDANTELSMFDNDDLDWS 273 Query: 293 GNPNGEIPSEQLPIVKKELPNEFVSKGIAATYYYYFNTTEKPFSNVKIRKALTMAINRQA 352 G P +P++ +P +K+ + ++ IA TY Y FNT PF+N KIRKA AI+R++ Sbjct: 274 GAPLSSLPTDAIPALKES--GQMQTRPIAGTYLYKFNTEVPPFNNAKIRKAFAYAIDRKS 331 Query: 353 LIDNITLGGQLPAFGLVPPGIAGVDGEYRNTIKDSYFTEDVEQAKTLLAEGLKEEGLTAL 412 +IDNIT Q PA GL+PP +A Y KD DVE AK +L EG+KEEG+T + Sbjct: 332 IIDNITQANQEPAMGLIPPTMAVATSPY---FKDG----DVEAAKKMLEEGMKEEGITKM 384 Query: 413 PPVELSYNTSENHKKIALAIADMWKNSLGITVNTVNQEWAVFIDNRQNQNYQIARAGWTA 472 P + LS+NTSE HKKIA AI D WK +LG+ + N+EW VF+++ +QIAR+ WT Sbjct: 385 PTLTLSFNTSEGHKKIAEAIQDQWKKALGVDIKLENKEWKVFLEDVNQGKFQIARSSWTG 444 Query: 473 DYNDPMTFLDMFV-TGGGNNDAGYANPEYDKLIADAKASTDLAKRQEDFAAAEKMLIQDD 531 DYNDP TFLD+F GGNND + NP+Y +L+ + D KR++ A AE + + D+ Sbjct: 445 DYNDPYTFLDLFKDKDGGNNDTKWENPKYKELLNQSALEKDPEKRKQILAQAEAIFM-DE 503 Query: 532 MVIMPIYYYTNNSLTKEYLKGVTLDFSGAVDF 563 M PIYYYT++ + K+ +KGV LD G D+ Sbjct: 504 MPAAPIYYYTHSYVKKDKVKGVVLDGLGFADW 535 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,447,880,475 Number of extensions: 147355402 Number of successful extensions: 377619 Number of sequences better than 1.0e-05: 5880 Number of HSP's gapped: 356940 Number of HSP's successfully gapped: 5923 Length of query: 571 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 430 Effective length of database: 1,732,333,088 Effective search space: 744903227840 Effective search space used: 744903227840 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)