BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0264.0052.p
         (98 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KG82.1 B3KG82_9BACI Putative uncharacterized protein                 67   4e-10

>B3KG82.1 B3KG82_9BACI Putative uncharacterized protein
          Length = 137

 Score = 67.4 bits (163), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/92 (42%), Positives = 56/92 (60%)

Query: 3   LPLQEKLLYMLTLGVFVLVAATLIWRYVHIYDLNLQAQKLDAQISSTKKDIATFQMEKQT 62
           LP +EKLLY+L++   V V   +   +VH YDLN Q Q  + +I   K++I   Q+EKQT
Sbjct: 35  LPQKEKLLYLLSVVFVVAVMGVIGMSHVHSYDLNRQIQATENKILDAKRNINQLQVEKQT 94

Query: 63  LEQSVAQRAAELGYTKPSEDSTIYVPLNSTAT 94
           LE  V  +A ELGY    +D+TI++   S +T
Sbjct: 95  LEMQVLDKAKELGYVPIEDDNTIHLSPVSGST 126


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.130    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 481,332,236
Number of extensions: 13772353
Number of successful extensions: 60797
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 60799
Number of HSP's successfully gapped: 1
Length of query: 98
Length of database: 3,060,696,203
Length adjustment: 67
Effective length of query: 31
Effective length of database: 2,429,488,198
Effective search space: 75314134138
Effective search space used: 75314134138
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)