BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0042.p (374 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG90.1 B3KG90_9BACI UDP-N-acetylglucosamine--N-acetylmuramyl-(... 550 e-155 C0ZGA5.1 C0ZGA5_BREBN Probable UDP-N-acetylglucosamine--N-acetyl... 404 e-111 Q2B4P4.1 Q2B4P4_9BACI N-acetylglucosaminyl transferase 395 e-108 P37585.3 MURG_BACSU UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 392 e-107 B7GGI2.1 MURG_ANOFW UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 390 e-107 >B3KG90.1 B3KG90_9BACI UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase EC=2.4.1.227 Length = 369 Score = 550 bits (1417), Expect = e-155, Method: Compositional matrix adjust. Identities = 269/369 (72%), Positives = 316/369 (85%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MR+VL+GGGTGGHIYPAVA+ARQ + ED FLYIGG+RGLESKLVP E LPF+SIDIT Sbjct: 1 MRVVLTGGGTGGHIYPAVAIARQCEKEDPKSEFLYIGGERGLESKLVPQEKLPFESIDIT 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GFRRKLSMDNVKT+MRF KGVK SK +L+EFKPDVVIGTGGYVCGPVVYAA+KLGIPT+I Sbjct: 61 GFRRKLSMDNVKTIMRFFKGVKRSKALLKEFKPDVVIGTGGYVCGPVVYAAAKLGIPTMI 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQNAIPGLTN+FLSRYADTVAVSFEGTES+FP +K +YTGNPRATTV +A+ +RGFA+ Sbjct: 121 HEQNAIPGLTNQFLSRYADTVAVSFEGTESSFPKAKRTVYTGNPRATTVLSANRERGFAT 180 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 LGIP S VVL+VGGS GA+AIN AMI MAPF+ K VH+V+VTG+ YFE TR+++R + Sbjct: 181 LGIPVDSQVVLIVGGSRGAKAINNAMIGMAPFIHKLPNVHFVFVTGDTYFENTRESIRSQ 240 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 LG+ P+ LH+LPY+HNMPEVLA TSLIVNRAGASFLAEIT+LGIPSVLIPSPNVTNNHQE Sbjct: 241 LGTMPNHLHILPYIHNMPEVLAATSLIVNRAGASFLAEITSLGIPSVLIPSPNVTNNHQE 300 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 ANARQLE GA+ ++LEKDL +SL +++I+ R MS AS++LGK DSAA++ Sbjct: 301 ANARQLEEAGASSMILEKDLTAESLFRKLEEIMTNRSARELMSAASKKLGKPDSAAVITQ 360 Query: 364 ELRRLAAKR 372 E+RRL KR Sbjct: 361 EIRRLTGKR 369 >C0ZGA5.1 C0ZGA5_BREBN Probable UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase EC=2.4.1.227 Length = 370 Score = 404 bits (1037), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/369 (56%), Positives = 277/369 (75%), Gaps = 2/369 (0%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MR+VL+GGGTGGHIYPA+AVAR++ + AFLYIG K+GLE+ LVP N+PFQS++I+ Sbjct: 4 MRVVLTGGGTGGHIYPALAVAREVSRQYPQAAFLYIGSKKGLEAGLVPRSNIPFQSVEIS 63 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 G +RKLS+DN+KT+ +F++ V +K+MLREFKPDVVIGTGGYVCGPVVYAAS+LGIPTLI Sbjct: 64 GLKRKLSLDNLKTLWKFVRAVGDAKKMLREFKPDVVIGTGGYVCGPVVYAASRLGIPTLI 123 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN +PGLTN+FLSR VAVSF+ + + FP SK V+ TGNPRAT V + + G + Sbjct: 124 HEQNVVPGLTNKFLSRSVTRVAVSFKESLAHFPPSKTVL-TGNPRATEVMHGNAEAGRSF 182 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 LG+ +VL+ GGS GARAIN+A++ + +GK H+VYVTG+ +FE L E+ Sbjct: 183 LGVDNSKKIVLIFGGSRGARAINEAVLSVVTQLGKYTDTHFVYVTGDVHFEAISAQLGER 242 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 G+ PS + +LP+VHNMP+VLA T ++V RAGAS LAEITALG+PS+LIPSP VTNNHQE Sbjct: 243 -GTLPSNISVLPFVHNMPDVLAATHVLVGRAGASTLAEITALGVPSILIPSPYVTNNHQE 301 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR LEREGAA V++E+DL G+SL+ +++ I+ +M +S LG +A +V Sbjct: 302 KNARGLEREGAAHVIVERDLTGESLLLSLENILTNPAKWEEMKNSSLSLGMPQAATEIVR 361 Query: 364 ELRRLAAKR 372 +L + K+ Sbjct: 362 QLEAMTRKK 370 >Q2B4P4.1 Q2B4P4_9BACI N-acetylglucosaminyl transferase Length = 367 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 203/356 (57%), Positives = 264/356 (74%), Gaps = 6/356 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MRI +SGGGTGGHIYPA+A+ R++Q E+KD FLYIG ++GLES LV E +PF+SI IT Sbjct: 1 MRIAVSGGGTGGHIYPALALIREIQKENKDTEFLYIGTEKGLESTLVEREGIPFKSIHIT 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RKLS +N+KTV RFLKG S++ML++FK D+VIGTGGYVCGPVVYAA+KLGIPT+I Sbjct: 61 GFKRKLSFENMKTVFRFLKGTADSRKMLKDFKADIVIGTGGYVCGPVVYAAAKLGIPTII 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PGLTN+FLSRY D +AV FE + FP S+ VI TGNPRA+ V P +G S Sbjct: 121 HEQNSVPGLTNKFLSRYVDKIAVCFEEAKEFFP-SEKVILTGNPRASEVIGQDPVKGRLS 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIE-MAPFVGKGNGVHYVYVTGEAYFEETRKALRE 242 G+ VL+ GGS GAR IN+A+++ +A K V +YVTGE ++EE RK + E Sbjct: 180 AGLKTNIPSVLIFGGSRGARPINEAVLKSLAELQDKPYQV--LYVTGEVHYEEVRKEV-E 236 Query: 243 KLGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQ 302 +G+ P+ + + P+VHNMPEVLA T L V RAGA+ LAE+T+LGIPS+L+PSP VTNNHQ Sbjct: 237 LVGNPPNVI-IKPFVHNMPEVLAGTDLTVARAGATTLAELTSLGIPSILVPSPYVTNNHQ 295 Query: 303 EANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSA 358 E NAR L GAA +LLEK+L + L+ ++ I+ E + M +A+R LG D+A Sbjct: 296 EKNARALSDNGAAELLLEKELTSKKLVASIDGILLDEKKLKDMKKAARELGIPDAA 351 >P37585.3 MURG_BACSU UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase EC=2.4.1.227 Length = 363 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 197/365 (53%), Positives = 259/365 (70%), Gaps = 4/365 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 MRI +SGGGTGGHIYPA+A +++Q + FLYIG + GLE K+V EN+PF+SI+IT Sbjct: 1 MRIAISGGGTGGHIYPALAFIKEVQRRHPNVEFLYIGTENGLEKKIVERENIPFRSIEIT 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 GF+RKLS +NVKTVMRFLKGVK SK L EFKPD VIGTGGYVCGPVVYAA+K+GIPT++ Sbjct: 61 GFKRKLSFENVKTVMRFLKGVKKSKSYLAEFKPDAVIGTGGYVCGPVVYAAAKMGIPTIV 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN++PG+TN+FLS+Y + VA+ FE +S FP K V++TGNPRA+ V + R A Sbjct: 121 HEQNSLPGITNKFLSKYVNKVAICFEEAKSHFPSEK-VVFTGNPRASEVVSIKTGRSLAE 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 G+ E VL+ GGS GA IN+A+I+M V K +Y+TGE ++E+ L+ K Sbjct: 180 FGLSEDKKTVLIFGGSRGAAPINRAVIDMQD-VLKTRDYQVLYITGEVHYEKVMNELKSK 238 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 ++ P++H MPE L +IV RAGA+ +AEITALGIPSVLIPSP VT NHQE Sbjct: 239 GAADNMVTK--PFLHQMPEYLKAIDVIVARAGATTIAEITALGIPSVLIPSPYVTANHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSAALVVS 363 NAR L + AA+VL E +L+G+ L+EA+ +I+ E ++MSE ++ LG D+AA + S Sbjct: 297 VNARSLGQHDAAIVLKETELSGEKLIEALDRIVLNEQTLKEMSERTKSLGVPDAAARLYS 356 Query: 364 ELRRL 368 L L Sbjct: 357 VLEEL 361 >B7GGI2.1 MURG_ANOFW UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase EC=2.4.1.227 Length = 363 Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust. Identities = 195/355 (54%), Positives = 265/355 (74%), Gaps = 4/355 (1%) Query: 4 MRIVLSGGGTGGHIYPAVAVARQLQAEDKDPAFLYIGGKRGLESKLVPNENLPFQSIDIT 63 M+IV+SGGGTGGHIYPA+A +++ + + LYIG K+GLES +VP EN+PF +IDI+ Sbjct: 1 MKIVVSGGGTGGHIYPALAFIHEVKKQHPNVDVLYIGTKKGLESTIVPRENIPFHAIDIS 60 Query: 64 GFRRKLSMDNVKTVMRFLKGVKASKEMLREFKPDVVIGTGGYVCGPVVYAASKLGIPTLI 123 G +R LS +NVKT++RF+K V+A K++L+++KPDVV+GTGGYVCGPVVYAA+KLGIPT+I Sbjct: 61 GLKRSLSFENVKTIVRFIKSVRACKKLLKQYKPDVVLGTGGYVCGPVVYAAAKLGIPTII 120 Query: 124 HEQNAIPGLTNRFLSRYADTVAVSFEGTESAFPGSKHVIYTGNPRATTVTAASPQRGFAS 183 HEQN+IPGLTN FLSRYA+ VA+ FE T+ FP K V+ TGNPRA+ V + S Sbjct: 121 HEQNSIPGLTNTFLSRYANKVAICFEETKQYFPQEK-VVLTGNPRASEVVGKDGREARRS 179 Query: 184 LGIPEGSTVVLMVGGSGGARAINQAMIEMAPFVGKGNGVHYVYVTGEAYFEETRKALREK 243 LG+ E VL+VGGS GAR IN+A +++ V + +YVTG+ ++++ KA+ + Sbjct: 180 LGLDEKKKTVLIVGGSRGARPINEAFLQVLHEVEQ-KPYQCLYVTGDVHYDKVMKAVND- 237 Query: 244 LGSEPSWLHLLPYVHNMPEVLACTSLIVNRAGASFLAEITALGIPSVLIPSPNVTNNHQE 303 +G+ PS + + P++HNMPEVLA +IV RAGA+ LAEITALGIPS+LIPSP VTNNHQE Sbjct: 238 VGN-PSNVIIRPFIHNMPEVLAGVDVIVARAGATTLAEITALGIPSILIPSPYVTNNHQE 296 Query: 304 ANARQLEREGAAVVLLEKDLNGQSLMEAVQKIIGAEPVRRQMSEASRRLGKRDSA 358 NAR LE++GAA+V LE +L G L++ + +I+ E M EA+ +LG RD+A Sbjct: 297 KNARALEKKGAAIVRLESELTGVRLLDDIDRILLNEQTLTNMKEAAFQLGIRDAA 351 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,195,693,297 Number of extensions: 93657259 Number of successful extensions: 328283 Number of sequences better than 1.0e-05: 1644 Number of HSP's gapped: 323714 Number of HSP's successfully gapped: 1654 Length of query: 374 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 237 Effective length of database: 1,770,017,148 Effective search space: 419494064076 Effective search space used: 419494064076 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)