BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0036.p (349 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein 198 7e-49 Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein 197 2e-48 Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein 196 3e-48 B8FR56.1 B8FR56_DESHD Putative uncharacterized protein 196 3e-48 Q4V1V5.1 Q4V1V5_BACCZ Putative uncharacterized protein 196 4e-48 >B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein Length = 325 Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust. Identities = 114/273 (41%), Positives = 162/273 (59%), Gaps = 17/273 (6%) Query: 5 ELLDPRVDFVFKRIFASENNKDVLLAFLNHIFMDAGDAPLDEVILLNPYTDKDDPQDKLS 64 E + ++D+ FK IF E N+ +L+AFLN + ++E+ ++NP +K+ P+DK S Sbjct: 3 EFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEEITIINPELNKEYPEDKKS 62 Query: 65 IFDIWAKTVEGKLINIEMQLFNKYDMEKRTLYYWSKRYSGQLQTGGRYTELKKCVTINIL 124 I D+ A T +G INIE+QL N+YDMEKR+LYYW++ YS Q++ G Y EL K V+INI+ Sbjct: 63 ILDVRAITSQGMQINIEIQLSNQYDMEKRSLYYWAQMYSRQIREGMAYKELTKTVSINIV 122 Query: 125 NYKVLPNEHT-HSVFHLREDISGAPLTDDIEIHFLELPKL-----NQPAVPGEGGLINWL 178 ++ L + H+VFHL ED LTD +EIHF+ELPKL + E L+ WL Sbjct: 123 DFNYLKQTSSYHNVFHLYEDEEKFQLTDVLEIHFMELPKLLAKWRKREISLWENELVRWL 182 Query: 179 LFLKGSDNSN----WEVLRMNEPALRKAMETLEFLSQDSEARRKYEERQKALHDE-ASQR 233 L L+G+DN E + M +P L +AM E S+D R Y +R+KA+ DE A+ R Sbjct: 183 LLLEGADNQEILQILEEIAMKDPVLYQAMNAWEETSEDPRIREAYFDRRKAILDEKAAIR 242 Query: 234 DGAQR------EGFAKGMQEGLQAGMQAGMQEG 260 + R EG AKG+ EG G+ G EG Sbjct: 243 EAELRLQEALEEGMAKGIAEGRAKGIAEGKAEG 275 >Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein Length = 288 Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 107/243 (44%), Positives = 152/243 (62%), Gaps = 3/243 (1%) Query: 12 DFVFKRIFASENNKDVLLAFLNHIFMDAGDAPLDEVILLNPYTDKDDPQDKLSIFDIWAK 71 D++FK +F NK++LL+FLN + G L ++ L D + DKLS DI K Sbjct: 10 DYLFKWVFGRPENKEILLSFLNSVLSPNGQDELADITLAERELDPEHIHDKLSRLDILGK 69 Query: 72 TVEGKLINIEMQLFNKYDMEKRTLYYWSKRYSGQLQTGGRYTELKKCVTINILNYKVLPN 131 +G +INIE+Q+ N+YD++KRTLYYW+K Y GQLQ G RY +L + +T+N+LN+ LP+ Sbjct: 70 GNDGSIINIEVQIANQYDIDKRTLYYWAKLYQGQLQKGQRYKDLSRTITVNVLNFGFLPD 129 Query: 132 -EHTHSVFHLREDISGAPLTDDIEIHFLELPKLNQPAVPGEGGLINWLLFLKGSDNSNWE 190 + HS+F L E SG L D+EIHFLEL K +V + L WL++L ++ E Sbjct: 130 SQKYHSMFSLYEAHSGYRLNRDLEIHFLELSKWKALSVKPKTRLDKWLMYLSNTNPQEME 189 Query: 191 VLRMNEPALRKAMETLE-FLSQDSEARRKYEERQKALHDEASQRDGAQREGFAKGMQEGL 249 + M+EPA+RKA+ E FL QD E R YE R+KAL D S +GA+ EG A+G+ +G+ Sbjct: 190 EIAMSEPAIRKALTAEEIFLKQDKE-RYLYEMREKALLDHVSAIEGAKEEGVAEGIAKGI 248 Query: 250 QAG 252 G Sbjct: 249 AEG 251 >Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein Length = 308 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/270 (41%), Positives = 162/270 (60%), Gaps = 13/270 (4%) Query: 2 NIMELLDPRVDFVFKRIFASENNKDVLLAFLNHIFMDAGDAPLDEVILLNPYTDKDDPQD 61 ++ E + ++D+ FK IF E N+ +L+AFLN + ++ + ++NP +K+ D Sbjct: 7 SMKEFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEAITIMNPELNKEYQGD 66 Query: 62 KLSIFDIWAKTVEGKLINIEMQLFNKYDMEKRTLYYWSKRYSGQLQTGGRYTELKKCVTI 121 K SI D+ A+T EG INIE+QL N+YDMEKR+LYYW++ YS Q++ G Y EL K VTI Sbjct: 67 KKSILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQIREGMAYKELAKAVTI 126 Query: 122 NILNYKVLP-NEHTHSVFHLREDISGAPLTDDIEIHFLELPKL-----NQPAVPGEGGLI 175 NIL++ L + H+VFHL ED LTD +E+HF+ELPKL N+ P E L+ Sbjct: 127 NILDFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLAKWRNREISPWENELV 186 Query: 176 NWLLFLKGSDN----SNWEVLRMNEPALRKAMETLEFLSQDSEARRKYEERQKALHDE-A 230 WLL L+G+DN E + M +P L +AM E S D R Y +R+KA+ DE A Sbjct: 187 RWLLLLEGADNQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRIREAYFDRRKAVLDEKA 246 Query: 231 SQRDGAQREGFAKGMQEGLQAGMQAGMQEG 260 + R+ R + +++G AG+ AG EG Sbjct: 247 AIREAELR--LKEALEKGRAAGIAAGKAEG 274 >B8FR56.1 B8FR56_DESHD Putative uncharacterized protein Length = 308 Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 112/270 (41%), Positives = 162/270 (60%), Gaps = 13/270 (4%) Query: 2 NIMELLDPRVDFVFKRIFASENNKDVLLAFLNHIFMDAGDAPLDEVILLNPYTDKDDPQD 61 ++ E + ++D+ FK IF E N+ +L+AFLN + ++ + ++NP +K+ D Sbjct: 7 SMKEFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEAITIMNPELNKEYQGD 66 Query: 62 KLSIFDIWAKTVEGKLINIEMQLFNKYDMEKRTLYYWSKRYSGQLQTGGRYTELKKCVTI 121 K SI D+ A+T EG INIE+QL N+YDMEKR+LYYW++ YS Q++ G Y EL K VTI Sbjct: 67 KKSILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQIREGMAYKELAKAVTI 126 Query: 122 NILNYKVLP-NEHTHSVFHLREDISGAPLTDDIEIHFLELPKL-----NQPAVPGEGGLI 175 NIL++ L + H+VFHL ED LTD +E+HF+ELPKL N+ P E L+ Sbjct: 127 NILDFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLAKWRNREISPWENELV 186 Query: 176 NWLLFLKGSDN----SNWEVLRMNEPALRKAMETLEFLSQDSEARRKYEERQKALHDE-A 230 WLL L+G+DN E + M +P L +AM E S D R Y +R+KA+ DE A Sbjct: 187 RWLLLLEGADNQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRIREAYFDRRKAVLDEKA 246 Query: 231 SQRDGAQREGFAKGMQEGLQAGMQAGMQEG 260 + R+ R + +++G AG+ AG EG Sbjct: 247 AIREAELR--LKEALEKGRAAGIAAGKAEG 274 >Q4V1V5.1 Q4V1V5_BACCZ Putative uncharacterized protein Length = 298 Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 111/268 (41%), Positives = 164/268 (61%), Gaps = 14/268 (5%) Query: 6 LLDPRVDFVFKRIFASENNKDVLLAFLNHIFMDAGDAPLDEVILLNPYTDKDDPQDKLSI 65 L++ R+DF FK++F + N+D+L+AFLN I D+ ++P+ + L +P+ ++ +DKLSI Sbjct: 5 LVNLRIDFAFKQLFGTNGNEDILVAFLNAILKDSLESPIVALQLEDPHLHREYEEDKLSI 64 Query: 66 FDIWAKTVEGKLINIEMQLFNKYDMEKRTLYYWSKRYSGQLQTGGRYTELKKCVTINILN 125 DI A G +N+E+QL N +DM KR+LYYW + Y+ QLQ G Y+ L K +TIN+LN Sbjct: 65 LDISATLNTGTKVNVEIQLNNNHDMIKRSLYYWGRLYTSQLQKGMPYSSLHKTITINLLN 124 Query: 126 YKVLPN-EHTHSVFHLREDISGAPLTDDIEIHFLELPKLNQ-----PAVPGEGGLINWLL 179 + + P E H+ L L+DDIE+H +E+PKL Q P E + WLL Sbjct: 125 FVMFPEYEEFHTTGILWNQQQQKLLSDDIEVHIVEIPKLLQQWREEKVNPWEDSFVRWLL 184 Query: 180 FLKGSDN----SNWEVLRMNE-PALRKAMETLEFLSQDSEARRKYEERQKALHDEASQRD 234 L +++ E + MN+ P L+KAM E +SQDS R+ YE R+KAL DEA++ Sbjct: 185 LLPANEDEYLTQTLEDIAMNQDPILQKAMNKWERMSQDSSFRQAYEAREKALMDEAAKFA 244 Query: 235 GAQREGFAKGMQEGLQAG---MQAGMQE 259 A++EG +G+QEG+Q G M GM E Sbjct: 245 HARKEGKKEGIQEGVQQGKIQMIKGMHE 272 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,756,169,318 Number of extensions: 73280732 Number of successful extensions: 183413 Number of sequences better than 1.0e-05: 523 Number of HSP's gapped: 182524 Number of HSP's successfully gapped: 523 Length of query: 349 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 213 Effective length of database: 1,779,438,163 Effective search space: 379020328719 Effective search space used: 379020328719 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 132 (55.5 bits)