BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0264.0025.p (1030 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KGA6.1 B3KGA6_9BACI Isoleucyl-tRNA synthetase 1734 0.0 B1DKM1.1 B1DKM1_9BACL Isoleucyl-tRNA synthetase 1563 0.0 C0Z943.1 C0Z943_BREBN Isoleucyl-tRNA synthetase EC=6.1.1.5 1445 0.0 C2UD81.1 C2UD81_BACCE Isoleucyl-tRNA synthetase 2 1246 0.0 C2R7J9.1 C2R7J9_BACCE Isoleucyl-tRNA synthetase 2 1246 0.0 >B3KGA6.1 B3KGA6_9BACI Isoleucyl-tRNA synthetase Length = 1029 Score = 1734 bits (4492), Expect = 0.0, Method: Compositional matrix adjust. Identities = 809/1028 (78%), Positives = 915/1028 (89%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M +VDVKEKARAR++RIL KW++ENTF++S+E R G+PNYVFYEGPPTANG PHIGHVLG Sbjct: 1 MNRVDVKEKARARELRILNKWNEENTFKKSIELRAGKPNYVFYEGPPTANGAPHIGHVLG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 RVIKDF+GRYQTMKGY VVRKAGWDTHGLPVELGV+K+LGISGKQEIE YGVE FIK+CK Sbjct: 61 RVIKDFVGRYQTMKGYHVVRKAGWDTHGLPVELGVEKQLGISGKQEIENYGVEAFIKKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 SVF YE +WRE TEAI YWTDLDHPY+TL+N YIESVWNILAT+H+KGLLYRGHRVSPY Sbjct: 121 ASVFEYEHKWRELTEAIAYWTDLDHPYITLENNYIESVWNILATIHDKGLLYRGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGSGDYVLAWTTTPWTLPAHMALAMNPDM 240 CP CQTTLSSHEVAQGY+ VKDLSATAKFKL+ SG+YVLAWTTTPWTLP+H+ALA+NPDM Sbjct: 181 CPCCQTTLSSHEVAQGYEDVKDLSATAKFKLHDSGEYVLAWTTTPWTLPSHVALAVNPDM 240 Query: 241 EYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIVG 300 +Y R QEDG+Y++AKNL E+V+KG++T+LST KG++ +G++Y PPF Y++AEK N++VG Sbjct: 241 DYARVEQEDGIYIVAKNLVEDVMKGDFTVLSTLKGSELVGKTYDPPFPYVKAEKSNIVVG 300 Query: 301 ASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDCD 360 ASFVTD+SGTGIVHMAPAHGEDDY+ CRENGISFV+VV+ G+YTD V+DFAGRFVKDCD Sbjct: 301 ASFVTDASGTGIVHMAPAHGEDDYRVCRENGISFVSVVNGHGRYTDEVTDFAGRFVKDCD 360 Query: 361 LDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSVD 420 LDIVK LSEKGLLYSKEKYEHSYPFCWRC +PLLYYA +SWFI+TTA+KDQLIANNN V Sbjct: 361 LDIVKALSEKGLLYSKEKYEHSYPFCWRCKSPLLYYAMESWFIETTAVKDQLIANNNEVT 420 Query: 421 WYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIGE 480 WYP HVREGRFGKFLE+LVDWNISRNRYWGTPLN+W+C +F+PHSIAELR+ A+GE Sbjct: 421 WYPGHVREGRFGKFLEDLVDWNISRNRYWGTPLNVWVCDSCEGQFSPHSIAELRANAVGE 480 Query: 481 VPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFED 540 + ED+ELHKPYVD +K++ P EGGVM RTSEVIDVWFDSGSMP+AQ HYPFE+++KFE Sbjct: 481 MAEDLELHKPYVDEVKVKCPHCEGGVMERTSEVIDVWFDSGSMPYAQYHYPFEDKEKFEQ 540 Query: 541 QYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVID 600 QYPADMICEGIDQTRGWFYSLLAVSTLF GKAPYKAV+A GHI DENGQKMSKSKGNVID Sbjct: 541 QYPADMICEGIDQTRGWFYSLLAVSTLFTGKAPYKAVMATGHILDENGQKMSKSKGNVID 600 Query: 601 PWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGIDG 660 PWEI+ EYGTDAFRWA+L+DSAPWN+KRFS+G+VGE KSK+VDTLVNTHAFLTLYAGIDG Sbjct: 601 PWEIIEEYGTDAFRWALLADSAPWNSKRFSKGIVGEAKSKVVDTLVNTHAFLTLYAGIDG 660 Query: 661 YDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIRR 720 YDP +H FK S HKLDRWILSRLNSLI +VDKGLAVNDF+N +KA+E +VDELSNWYIRR Sbjct: 661 YDPKEHDFKGSNHKLDRWILSRLNSLIQVVDKGLAVNDFLNAAKAIEAYVDELSNWYIRR 720 Query: 721 SRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYPV 780 SRDRFWGSGLGE+KL AY MAPFTPMLSEDIF+NLGGGESVHLAD+P Sbjct: 721 SRDRFWGSGLGEDKLAAYGTLTHVLLTLSKLMAPFTPMLSEDIFVNLGGGESVHLADFPQ 780 Query: 781 ADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIVSIDRSFHLADYEEIIK 840 ADE+LID LEQDME+ARQIVELARNVRNETGIK RQPLS LIVS+DR F LA YE+IIK Sbjct: 781 ADEALIDKALEQDMETARQIVELARNVRNETGIKTRQPLSNLIVSMDREFDLAGYEDIIK 840 Query: 841 DEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQEGV 900 DEINVK I VE SDSGFVDFTLK+NLKVAGKKYGKN+GFLQGFLK + S+ TRK VQ G Sbjct: 841 DEINVKAIEVETSDSGFVDFTLKMNLKVAGKKYGKNIGFLQGFLKGMSSDETRKVVQSGG 900 Query: 901 IAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREIVRA 960 + + SPEGEELQIT+EELLVEK+AK GFASASGYGLTVALNT+ITPELEQEGWVRE+VRA Sbjct: 901 VNVTSPEGEELQITSEELLVEKKAKEGFASASGYGLTVALNTDITPELEQEGWVREVVRA 960 Query: 961 VQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDFDGEHAFETVEAG 1020 VQD RK+LDLPIEKR+ LTL D EL+AA+TAFE VLRENVLV + + E VE G Sbjct: 961 VQDTRKKLDLPIEKRVNLTLDTDDELQAAITAFEDVLRENVLVNDLKYGQSEGMERVELG 1020 Query: 1021 GKSIGIHI 1028 GK+IGIHI Sbjct: 1021 GKTIGIHI 1028 >B1DKM1.1 B1DKM1_9BACL Isoleucyl-tRNA synthetase Length = 997 Score = 1563 bits (4047), Expect = 0.0, Method: Compositional matrix adjust. Identities = 726/974 (74%), Positives = 851/974 (87%), Gaps = 1/974 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 MQ+VDVKEKARAR++R+LK+W++ +TF++S+ENR G+PNYVFYEGPPTANG PHIGHVLG Sbjct: 1 MQRVDVKEKARARELRVLKQWAENDTFKQSIENRAGKPNYVFYEGPPTANGAPHIGHVLG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 RVIKDFIGRY+TM GYRVVRKAGWDTHGLPVELGV+K+LGISGKQEIE+YGVE+FIK+CK Sbjct: 61 RVIKDFIGRYKTMSGYRVVRKAGWDTHGLPVELGVEKQLGISGKQEIEKYGVEEFIKKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 +SVF YEKQWRE TEAI YWTDLD+PY+TL N YIESVW+IL+T+H KGLLYRGHRVSPY Sbjct: 121 DSVFVYEKQWRELTEAIAYWTDLDNPYITLKNEYIESVWHILSTIHGKGLLYRGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGSGDYVLAWTTTPWTLPAHMALAMNPDM 240 CP CQTTLSSHEVAQGY+ VKDLSAT KFKL SG+ +LAWTTTPWTLPA++ALA+NP++ Sbjct: 181 CPCCQTTLSSHEVAQGYEDVKDLSATVKFKL-ASGESILAWTTTPWTLPANVALAVNPEL 239 Query: 241 EYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIVG 300 +YVRA ++ VY++A+NLAE VLK Y LST KG++ +G SY PPF Y+ E +V++ Sbjct: 240 DYVRASKDGEVYIVAQNLAESVLKEGYETLSTLKGSELVGLSYEPPFRYVPVEHGHVVIP 299 Query: 301 ASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDCD 360 FV+D+SGTGIVH+APAHGEDDYK R+NGIS ++VV+ +G+Y D V+D AGRFVKDCD Sbjct: 300 GDFVSDTSGTGIVHIAPAHGEDDYKVSRQNGISMLSVVNNAGRYIDEVTDLAGRFVKDCD 359 Query: 361 LDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSVD 420 +DIVK+LSE+GLL+SKE+YEHSYPFCWRC +PLLYYAT+SWFI+TT +KDQLIANN++VD Sbjct: 360 VDIVKMLSERGLLFSKERYEHSYPFCWRCKSPLLYYATESWFIETTKVKDQLIANNSTVD 419 Query: 421 WYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIGE 480 WYP H+REGRFGKFLE+LVDWNISRNRYWGTPLN+W+C+ TGKE+AP SIA+LR A+ Sbjct: 420 WYPGHIREGRFGKFLEDLVDWNISRNRYWGTPLNVWVCEATGKEYAPSSIADLRERAVDF 479 Query: 481 VPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFED 540 VPEDIELHKPYVD IKL+SPF EG VM RTSEVIDVWFDSGSMPFAQ H+PFEN ++F + Sbjct: 480 VPEDIELHKPYVDEIKLKSPFQEGAVMTRTSEVIDVWFDSGSMPFAQQHHPFENAEEFAE 539 Query: 541 QYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVID 600 QYPADMICEGIDQTRGWF+SLLAVSTL+ GKAPYKAVI+ GHI DENGQKMSKSKGNVID Sbjct: 540 QYPADMICEGIDQTRGWFFSLLAVSTLYNGKAPYKAVISTGHILDENGQKMSKSKGNVID 599 Query: 601 PWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGIDG 660 PWEI+NEYGTDAFRWA+L+DSAPWN+KRFSRG+VGE KSK++DT+VNTHAF LYA IDG Sbjct: 600 PWEIINEYGTDAFRWALLADSAPWNSKRFSRGIVGEAKSKVIDTIVNTHAFYALYASIDG 659 Query: 661 YDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIRR 720 ++PADH + S KLDRWI+SRLNSLI V KGL VNDF+N +K +E FVDELSNWYIRR Sbjct: 660 FNPADHEERSSASKLDRWIVSRLNSLIKTVVKGLEVNDFLNPAKTIEVFVDELSNWYIRR 719 Query: 721 SRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYPV 780 SRDRFWGSGL E+K+ AY+ +AP+ P+L+ED++ NLGG SVHLADYPV Sbjct: 720 SRDRFWGSGLTEDKVAAYQTLRHVLLTLSRVIAPYAPLLAEDVYGNLGGESSVHLADYPV 779 Query: 781 ADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIVSIDRSFHLADYEEIIK 840 ADES ID LE+DM+SA+QIVELARNVRNETGIK RQPLSELIVS+DR F + +YE+IIK Sbjct: 780 ADESAIDETLERDMDSAKQIVELARNVRNETGIKTRQPLSELIVSLDRDFAVTEYEDIIK 839 Query: 841 DEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQEGV 900 DEINVK IVV+ SDSGFVDFTLKLNLKVAGKKYGK+VG +QG+LK L EATR+AV G Sbjct: 840 DEINVKSIVVQTSDSGFVDFTLKLNLKVAGKKYGKHVGPIQGYLKGLAPEATREAVTSGS 899 Query: 901 IAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREIVRA 960 + S EGE + +T EELLVEKQAK GFASAS GLTVALNT+ITPELEQEGWVRE++RA Sbjct: 900 LVFTSAEGEAITVTTEELLVEKQAKSGFASASANGLTVALNTDITPELEQEGWVREVIRA 959 Query: 961 VQDYRKRLDLPIEK 974 VQD RK+LDLPIEK Sbjct: 960 VQDTRKKLDLPIEK 973 >C0Z943.1 C0Z943_BREBN Isoleucyl-tRNA synthetase EC=6.1.1.5 Length = 1026 Score = 1445 bits (3741), Expect = 0.0, Method: Compositional matrix adjust. Identities = 676/1029 (65%), Positives = 831/1029 (80%), Gaps = 3/1029 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKEKARAR++R+L++W +TFR+SM+NR G PN+VFYEGPPTANG PHIGHVLG Sbjct: 1 MRKVDVKEKARARELRVLEQWRKNDTFRKSMDNRLGMPNFVFYEGPPTANGQPHIGHVLG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 RVIKDFIGRY+TM GYRVVRKAGWDTHGLPVELGV+K+LGISGKQEIE YGV KF++ECK Sbjct: 61 RVIKDFIGRYKTMSGYRVVRKAGWDTHGLPVELGVEKRLGISGKQEIENYGVAKFVEECK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 SVF YEKQWRE TE I YWTD++HPYVTL N YIESVW+IL+ +H+K LLY+GHRVSPY Sbjct: 121 NSVFEYEKQWRELTEGIAYWTDMEHPYVTLTNDYIESVWHILSDIHKKELLYKGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGSGDYVLAWTTTPWTLPAHMALAMNPDM 240 CP CQTTLSSHEVAQGY+ VKDLSAT KFK S DY LAWTTTPWTLPA++ALA+N ++ Sbjct: 181 CPDCQTTLSSHEVAQGYEDVKDLSATVKFKSKTSDDYFLAWTTTPWTLPANVALAVNKEL 240 Query: 241 EYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIVG 300 +YVR + +D VYV+AKNLAE+V K +Y +L+THKG + +G Y PPFGYI+ +++V Sbjct: 241 DYVRVKHKDEVYVVAKNLAEKVFKEDYEVLTTHKGAELVGTPYEPPFGYIKVNHGHIVVD 300 Query: 301 ASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDCD 360 A +V+D+SGTGIVH APAHGEDDY++ R++G+ FVNVV+ +G+YTD +SDFAGRFVKDCD Sbjct: 301 ADYVSDTSGTGIVHTAPAHGEDDYRTTRQHGLDFVNVVNLAGRYTDQISDFAGRFVKDCD 360 Query: 361 LDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSVD 420 +DIVK LS +GLL+SKE+YEHSYPFCWRC +PLLYYA +SWFI+TTAIKDQLI NN+ +D Sbjct: 361 VDIVKDLSHRGLLFSKERYEHSYPFCWRCKSPLLYYAMESWFIKTTAIKDQLIENNSKID 420 Query: 421 WYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIGE 480 WYP H+REGRFGKFLEELVDWNISRNRYWGTPLN+W+CQD G E+AP S+ ELR ++ Sbjct: 421 WYPGHLREGRFGKFLEELVDWNISRNRYWGTPLNLWLCQDCGSEYAPGSVKELREKSVAP 480 Query: 481 VPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFED 540 + E +ELHKP+VD +KLR S GG M RT EVIDVWFDSGSMPFAQ H+PF ++ FE+ Sbjct: 481 IDEKLELHKPFVDEVKLRC--SCGGTMERTPEVIDVWFDSGSMPFAQYHHPFGDEKVFEE 538 Query: 541 QYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVID 600 QYPAD+I EGIDQTRGWF+SLLAVSTL+ GKAPYKAVI+ GH+ DE+GQKMSKSKGN ID Sbjct: 539 QYPADIISEGIDQTRGWFFSLLAVSTLYNGKAPYKAVISTGHVLDEHGQKMSKSKGNGID 598 Query: 601 PWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGIDG 660 PWE++ E+G DAFRWA+LSDSAPW++KRFS+ +V E K K++D + +TH F +LY ID Sbjct: 599 PWEVIEEFGADAFRWALLSDSAPWSSKRFSKRIVAEAKYKVIDKIHSTHDFYSLYGLIDA 658 Query: 661 YDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIRR 720 + P +HP + +KLDRWI SRLN+ + V KGL DF+N + +E FVDELSNWYIRR Sbjct: 659 FKPEEHPTQPPVNKLDRWIFSRLNTTLQHVVKGLETYDFMNPAGHIEAFVDELSNWYIRR 718 Query: 721 SRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYPV 780 SRDRFW SG+ +K+ AY+ +AP+ P+++ED++ NLGG SVHL DYP Sbjct: 719 SRDRFWSSGMTPDKVSAYQTLREVLLTLAKMIAPYAPLIAEDLYGNLGGEGSVHLTDYPK 778 Query: 781 ADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIVSIDRSFHLADYEEIIK 840 + ID LE+DME+AR IVELARNVRNETG+K RQPLSELIV++++ F+L + II+ Sbjct: 779 VNTEAIDETLERDMETARNIVELARNVRNETGLKTRQPLSELIVTMEQPFNLERFASIIE 838 Query: 841 DEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQEGV 900 DEINVK I VE SDS FV + KLNLKVAGKKYG+ VG +QG+LK L++ +KAV G Sbjct: 839 DEINVKNIRVEQSDSSFVTYHFKLNLKVAGKKYGQLVGPIQGYLKELEAADAQKAVDNGY 898 Query: 901 IAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREIVRA 960 + V GE +++T +ELLVEKQ K GFASASGY L VALNT +T ELEQEG VRE++R Sbjct: 899 LD-VEVAGERVRLTLDELLVEKQGKQGFASASGYQLHVALNTTLTEELEQEGLVREVIRV 957 Query: 961 VQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDFDGEHAFETVEAG 1020 +QD RK+LDLPI+KR+ LTL VD EL+AA+ F+HVLR +VLV+ V F ETV G Sbjct: 958 IQDARKKLDLPIDKRVQLTLDVDDELRAALERFDHVLRGSVLVSDVSFAKIADRETVSIG 1017 Query: 1021 GKSIGIHIG 1029 K++G+HIG Sbjct: 1018 DKTLGLHIG 1026 >C2UD81.1 C2UD81_BACCE Isoleucyl-tRNA synthetase 2 Length = 1033 Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 588/1011 (58%), Positives = 752/1011 (74%), Gaps = 6/1011 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKE A R++RI K+W+++N F +S++NREG ++VFYEGPPTANG+PH+GH LG Sbjct: 1 MEKVDVKESAVGREMRIRKQWNEQNIFEQSIQNREGAQSFVFYEGPPTANGLPHVGHALG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 R IKD + RY+TM GY+V+RKAGWDTHGLPVELGV+K+LGISGK EIEEYG+E FI++CK Sbjct: 61 RTIKDLVARYKTMAGYKVLRKAGWDTHGLPVELGVEKQLGISGKHEIEEYGIEPFIQKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 ESVF YEKQWREFTE+IGYW D+D PYVTL N YIESVW+IL T+HEKGLLY+GHRVSPY Sbjct: 121 ESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTIHEKGLLYKGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGS-GDYVLAWTTTPWTLPAHMALAMNPD 239 CPSCQT+LSSHEVAQGYKTVKDLSAT KFK+ S +Y L WTTTPWTLPA++ALA++P+ Sbjct: 181 CPSCQTSLSSHEVAQGYKTVKDLSATVKFKVKDSENEYFLGWTTTPWTLPANVALAVHPN 240 Query: 240 MEYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIV 299 MEYV+A+QE VY++AK +EVLK Y +LS HKG + + SYT PF + ++ Sbjct: 241 MEYVKAKQESHVYIVAKERVQEVLKENYEVLSVHKGEELLNTSYTAPFPMKEVTNGYRVI 300 Query: 300 GASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDC 359 A FVT SGTG+VH+APA+GEDDY+ + G+SF++VVD G+YT+ V G+FVKDC Sbjct: 301 AADFVTGDSGTGLVHIAPAYGEDDYRVVQSEGLSFLHVVDEKGEYTEAVPFLKGKFVKDC 360 Query: 360 DLDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSV 419 D+DIV+ L+++GLLY KEKYEHSYP CWRCD+PLLYYA +SW I+TTAIKD + NN+SV Sbjct: 361 DVDIVRYLAKEGLLYHKEKYEHSYPHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDSV 420 Query: 420 DWYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIG 479 WYPDH++ GRFGKFLE +VDWNISRNRYWGTPLN+W C+ +FAP SIAELR + Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESCDHQFAPKSIAELRKHSTK 480 Query: 480 EVPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFE 539 E PED+ELHKPYVD +++ GG M RT EVIDVWFDSGSMPFAQ HYPFEN++ FE Sbjct: 481 ETPEDLELHKPYVDEVQVCCEKC-GGTMNRTPEVIDVWFDSGSMPFAQYHYPFENKELFE 539 Query: 540 DQYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVI 599 +Q+PAD+I EGIDQTRGWFYSLLAVS L+ GK PYK V++ GH+ DE GQKMSKSKGN + Sbjct: 540 EQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNAL 599 Query: 600 DPWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGID 659 DP ++++++G DA RWA+L DSAPWN KRFS V E KSK VDTLVN ++F LYA +D Sbjct: 600 DPVDLVDKFGADALRWALLVDSAPWNAKRFSERTVLEAKSKFVDTLVNVYSFYVLYANLD 659 Query: 660 GYDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIR 719 Y+P + + V KLD W+LSRL+S V L F N ++ + VDE+SNWY+R Sbjct: 660 EYNPKE-TYDVRLTKLDEWVLSRLHSTTKKVRTALDDYQFTNAAREIAALVDEVSNWYVR 718 Query: 720 RSRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYP 779 RSR+RFW SG+ EK AY +APFTP ++EDI +NL GG SVHLADYP Sbjct: 719 RSRNRFWESGMNAEKAAAYETLHEVLVTISKLIAPFTPFVAEDIHLNLEGG-SVHLADYP 777 Query: 780 VADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIV--SIDRSFHLADYEE 837 V +ESL+ +LE +M++ Q+VEL R+ RN+ +K +QPL+EL++ + Y + Sbjct: 778 VVNESLLQPKLEAEMDAVLQVVELGRSNRNQHSLKVKQPLAELVLLEHNENDMDWESYRD 837 Query: 838 IIKDEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQ 897 I+ DE+NVK VE ++ + + LKLN K AG K+GKNV + G+LK L E + V Sbjct: 838 IVMDELNVKAFHVELDETKYTSYQLKLNFKTAGPKFGKNVNAVNGWLKQLSQEEVQNFVS 897 Query: 898 EGVIAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREI 957 G + GEE+ +TAE++LVEK AK GF++ + TV L+T +T EL QEG RE Sbjct: 898 TGRAVYEATPGEEVVVTAEDVLVEKVAKSGFSNTTNGQYTVMLDTNVTEELLQEGVAREF 957 Query: 958 VRAVQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDF 1008 +RAVQ+YRK+L+LP+ R+ + L + EL+ +T + +L EN+LV F Sbjct: 958 IRAVQEYRKQLNLPVNLRVDVILDTEVELQRTLTNHKDLLEENLLVKQFTF 1008 >C2R7J9.1 C2R7J9_BACCE Isoleucyl-tRNA synthetase 2 Length = 1033 Score = 1246 bits (3225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 589/1011 (58%), Positives = 751/1011 (74%), Gaps = 6/1011 (0%) Query: 1 MQKVDVKEKARARDVRILKKWSDENTFRRSMENREGRPNYVFYEGPPTANGVPHIGHVLG 60 M+KVDVKE A R+ RI K+W++++ F +S++NREG ++VFYEGPPTANG+PH+GH LG Sbjct: 1 MKKVDVKESAVGRETRIRKQWNEQSIFEQSIQNREGAQSFVFYEGPPTANGLPHVGHALG 60 Query: 61 RVIKDFIGRYQTMKGYRVVRKAGWDTHGLPVELGVQKKLGISGKQEIEEYGVEKFIKECK 120 R IKD + RY+TM GY+VVRKAGWDTHGLPVELGV+K+LGISGK EIEEYG+E FI++CK Sbjct: 61 RAIKDLVARYKTMAGYKVVRKAGWDTHGLPVELGVEKQLGISGKHEIEEYGIEPFIQKCK 120 Query: 121 ESVFGYEKQWREFTEAIGYWTDLDHPYVTLDNTYIESVWNILATVHEKGLLYRGHRVSPY 180 ESVF YEKQWREFTE+IGYW D+D PYVTL N YIESVW+IL T+HEKGLLY+GHRVSPY Sbjct: 121 ESVFTYEKQWREFTESIGYWVDMDDPYVTLKNPYIESVWHILGTIHEKGLLYKGHRVSPY 180 Query: 181 CPSCQTTLSSHEVAQGYKTVKDLSATAKFKLNGS-GDYVLAWTTTPWTLPAHMALAMNPD 239 CPSCQT+LSSHEVAQGYKTVKDLSAT KFK+ S +Y L WTTTPWTLPA++ALA++P+ Sbjct: 181 CPSCQTSLSSHEVAQGYKTVKDLSATVKFKVKDSENEYFLGWTTTPWTLPANVALAVHPN 240 Query: 240 MEYVRARQEDGVYVLAKNLAEEVLKGEYTILSTHKGTDFIGQSYTPPFGYIQAEKHNVIV 299 MEYV+A+QE VY++AK +EVLK Y +LS HKG + + SYT PF + ++ Sbjct: 241 MEYVKAKQEGHVYIVAKERVQEVLKENYEVLSVHKGEELLNTSYTAPFPMKEVTNGYRVI 300 Query: 300 GASFVTDSSGTGIVHMAPAHGEDDYKSCRENGISFVNVVDTSGKYTDVVSDFAGRFVKDC 359 A FVT SGTG+VH+APA+GEDDY+ + G+SF++VVD G+YT+ V GRFVKDC Sbjct: 301 AADFVTGDSGTGLVHIAPAYGEDDYRVVQSEGLSFLHVVDEKGEYTEAVPFLKGRFVKDC 360 Query: 360 DLDIVKVLSEKGLLYSKEKYEHSYPFCWRCDTPLLYYATDSWFIQTTAIKDQLIANNNSV 419 D+DIV+ L+++GLLY KEKYEHSYP CWRCD+PLLYYA +SW I+TTAIKD + NN+SV Sbjct: 361 DVDIVRYLAKEGLLYHKEKYEHSYPHCWRCDSPLLYYAGESWLIRTTAIKDTFLQNNDSV 420 Query: 420 DWYPDHVREGRFGKFLEELVDWNISRNRYWGTPLNIWICQDTGKEFAPHSIAELRSMAIG 479 WYPDH++ GRFGKFLE +VDWNISRNRYWGTPLN+W C+ +FAP SIAELR + Sbjct: 421 TWYPDHMKHGRFGKFLENMVDWNISRNRYWGTPLNVWECESCNHQFAPKSIAELRKHSTK 480 Query: 480 EVPEDIELHKPYVDNIKLRSPFSEGGVMVRTSEVIDVWFDSGSMPFAQSHYPFENQDKFE 539 E PED+ELHKPYVD +++ GG M RT EVIDVWFDSGSMPFAQ HYPFEN++ FE Sbjct: 481 ETPEDLELHKPYVDEVQVCCEKC-GGTMNRTPEVIDVWFDSGSMPFAQYHYPFENKELFE 539 Query: 540 DQYPADMICEGIDQTRGWFYSLLAVSTLFKGKAPYKAVIAHGHIFDENGQKMSKSKGNVI 599 +Q+PAD+I EGIDQTRGWFYSLLAVS L+ GK PYK V++ GH+ DE GQKMSKSKGN + Sbjct: 540 EQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSKSKGNAL 599 Query: 600 DPWEIMNEYGTDAFRWAILSDSAPWNNKRFSRGLVGETKSKIVDTLVNTHAFLTLYAGID 659 DP ++++++G DA RWA+L DSAPWN KRFS V E KSK VDTLVN ++F LYA +D Sbjct: 600 DPVDLVDKFGADALRWALLVDSAPWNAKRFSERTVLEAKSKFVDTLVNVYSFYVLYANLD 659 Query: 660 GYDPADHPFKVSGHKLDRWILSRLNSLILLVDKGLAVNDFVNTSKAVENFVDELSNWYIR 719 Y+P + + V KLD W+LSRL+S V GL F N ++ + VDE+SNWY+R Sbjct: 660 EYNPKE-TYDVKLTKLDEWVLSRLHSTTKKVRTGLDDYQFTNAAREIATLVDEVSNWYVR 718 Query: 720 RSRDRFWGSGLGEEKLDAYRXXXXXXXXXXXXMAPFTPMLSEDIFMNLGGGESVHLADYP 779 RSR+RFW SG+ EK AY +APFTP ++EDI +NL G SVHLADYP Sbjct: 719 RSRNRFWESGMNAEKAAAYETLHEVLVTISKLIAPFTPFVAEDIHLNLEGS-SVHLADYP 777 Query: 780 VADESLIDLELEQDMESARQIVELARNVRNETGIKNRQPLSELIV--SIDRSFHLADYEE 837 V +ESL+ +LE +M++ Q+VEL R+ RN+ +K +QPL+EL++ + Y + Sbjct: 778 VVNESLLQPKLEAEMDAVLQVVELGRSNRNQHSLKVKQPLAELVLLEHNENDMDWESYRD 837 Query: 838 IIKDEINVKEIVVEHSDSGFVDFTLKLNLKVAGKKYGKNVGFLQGFLKALDSEATRKAVQ 897 I+ DE+NVK VE ++ + + LKLN K AG K+GKNV + G+LK L E + V Sbjct: 838 IVMDELNVKAFHVELDETKYTSYQLKLNFKTAGPKFGKNVNAVNGWLKQLSQEEVQNFVS 897 Query: 898 EGVIAIVSPEGEELQITAEELLVEKQAKPGFASASGYGLTVALNTEITPELEQEGWVREI 957 G + GEE+ +TAE++LVEK AK GF++ + TV L+T +T EL QEG RE Sbjct: 898 TGRAVYEATPGEEVVVTAEDVLVEKVAKSGFSNTTNGQYTVMLDTNVTEELLQEGVAREF 957 Query: 958 VRAVQDYRKRLDLPIEKRIALTLKVDGELKAAVTAFEHVLRENVLVTTVDF 1008 +RAVQ+YRK+L+LP+ R+ + L + EL+ +T + +L EN+LV F Sbjct: 958 IRAVQEYRKQLNLPVNLRVDVILDTEVELQRTLTNHKDLLEENLLVKQFTF 1008 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 6,349,086,532 Number of extensions: 279372654 Number of successful extensions: 725937 Number of sequences better than 1.0e-05: 5638 Number of HSP's gapped: 699435 Number of HSP's successfully gapped: 7953 Length of query: 1030 Length of database: 3,060,696,203 Length adjustment: 146 Effective length of query: 884 Effective length of database: 1,685,228,013 Effective search space: 1489741563492 Effective search space used: 1489741563492 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 137 (57.4 bits)