BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0264.0024.p
         (183 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KGA7.1 B3KGA7_9BACI Putative uncharacterized protein                155   1e-36
B1DKM0.1 B1DKM0_9BACL Putative uncharacterized protein                120   4e-26
Q8R9N3.1 Q8R9N3_THETN Putative uncharacterized protein                102   1e-20
B0K8U1.1 B0K8U1_THEP3 Putative uncharacterized protein                100   7e-20
B0K2T4.1 B0K2T4_THEPX Putative uncharacterized protein                100   7e-20

>B3KGA7.1 B3KGA7_9BACI Putative uncharacterized protein
          Length = 116

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/93 (76%), Positives = 85/93 (91%)

Query: 88  EKLNAVYRLTTGLVQQMEKARIAEYTQLLNSPWRLVWLNVLSGTARGLGIALGFTFFAAT 147
           ++L A++R+TT + QQ+EKARIAEYTQLLN PW+L+W N+L+G+ARG+GIA+GFTFFAAT
Sbjct: 23  DQLGAIHRMTTDIAQQLEKARIAEYTQLLNRPWKLIWTNLLAGSARGVGIAIGFTFFAAT 82

Query: 148 IIYVLQVLGALNLPIIGDYIADIVRIVQHQLEL 180
           IIY LQ LGALNLPIIGDYIADIVRIVQ QLEL
Sbjct: 83  IIYALQALGALNLPIIGDYIADIVRIVQRQLEL 115


>B1DKM0.1 B1DKM0_9BACL Putative uncharacterized protein
          Length = 120

 Score =  120 bits (302), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 55/81 (67%), Positives = 69/81 (85%)

Query: 103 QMEKARIAEYTQLLNSPWRLVWLNVLSGTARGLGIALGFTFFAATIIYVLQVLGALNLPI 162
            ME+ +IA+Y  LLN P RL+W N+L G +RG+GIA+GFTFFAATI+YVL+++GALNLPI
Sbjct: 40  DMERTQIADYVDLLNHPLRLMWRNLLGGLSRGVGIAIGFTFFAATILYVLRIIGALNLPI 99

Query: 163 IGDYIADIVRIVQHQLELKTF 183
           IGDYIADIVR+VQ QLE K +
Sbjct: 100 IGDYIADIVRVVQIQLEGKIY 120


>Q8R9N3.1 Q8R9N3_THETN Putative uncharacterized protein
          Length = 104

 Score =  102 bits (255), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 48/89 (53%), Positives = 65/89 (73%)

Query: 90  LNAVYRLTTGLVQQMEKARIAEYTQLLNSPWRLVWLNVLSGTARGLGIALGFTFFAATII 149
           L A+ +    + + MEK +IA+Y +L+ SP+RL+WLN + G ARG GIA+GFT   A II
Sbjct: 15  LIAIKKQLDQMAELMEKMKIADYVELMQSPYRLLWLNFIGGVARGFGIAVGFTILGAIII 74

Query: 150 YVLQVLGALNLPIIGDYIADIVRIVQHQL 178
           Y+LQ L  LNLP+IG+ IADIV+IVQ +L
Sbjct: 75  YILQKLVVLNLPLIGNIIADIVKIVQQKL 103


>B0K8U1.1 B0K8U1_THEP3 Putative uncharacterized protein
          Length = 103

 Score =  100 bits (248), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 63/89 (70%)

Query: 90  LNAVYRLTTGLVQQMEKARIAEYTQLLNSPWRLVWLNVLSGTARGLGIALGFTFFAATII 149
           L A+ +    + + MEK +IA+Y +L+ SP+RL+WLN + G ARG GIA+GFT   A I+
Sbjct: 14  LTAIKKQLDQMSEMMEKMKIADYVELMQSPYRLLWLNFIGGVARGFGIAVGFTILGAIIL 73

Query: 150 YVLQVLGALNLPIIGDYIADIVRIVQHQL 178
           Y+LQ L  LNLP+IG  IADIV+IV  +L
Sbjct: 74  YILQKLVVLNLPVIGSIIADIVKIVNQKL 102


>B0K2T4.1 B0K2T4_THEPX Putative uncharacterized protein
          Length = 103

 Score =  100 bits (248), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 63/89 (70%)

Query: 90  LNAVYRLTTGLVQQMEKARIAEYTQLLNSPWRLVWLNVLSGTARGLGIALGFTFFAATII 149
           L A+ +    + + MEK +IA+Y +L+ SP+RL+WLN + G ARG GIA+GFT   A I+
Sbjct: 14  LTAIKKQLDQMSEMMEKMKIADYVELMQSPYRLLWLNFIGGVARGFGIAVGFTILGAIIL 73

Query: 150 YVLQVLGALNLPIIGDYIADIVRIVQHQL 178
           Y+LQ L  LNLP+IG  IADIV+IV  +L
Sbjct: 74  YILQKLVVLNLPVIGSIIADIVKIVNQKL 102


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,128,319,053
Number of extensions: 45655256
Number of successful extensions: 140909
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 140911
Number of HSP's successfully gapped: 27
Length of query: 183
Length of database: 3,060,696,203
Length adjustment: 127
Effective length of query: 56
Effective length of database: 1,864,227,298
Effective search space: 104396728688
Effective search space used: 104396728688
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 127 (53.5 bits)