BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0263.0024.p (193 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9K8C2.1 Q9K8C2_BACHD BH3084 protein 261 3e-68 B1YM78.1 B1YM78_EXIS2 Putative uncharacterized protein 252 1e-65 B1HWZ1.1 B1HWZ1_LYSSC Putative uncharacterized protein 237 3e-61 C0B1W4.1 C0B1W4_9ENTR Putative uncharacterized protein 236 1e-60 A3I7P8.1 A3I7P8_9BACI Putative uncharacterized protein 235 2e-60 >Q9K8C2.1 Q9K8C2_BACHD BH3084 protein Length = 187 Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 120/184 (65%), Positives = 149/184 (80%) Query: 4 IAVFCGSRDGASPVYKESAHALGKVLAEHGITLIYGGATVGLMGEVADAALEAGGDVIGV 63 IAVFCGS +GAS VYKE A LGK LA GITL+YGGA+VG+MG VAD+ LEAGG+VIGV Sbjct: 3 IAVFCGSSNGASDVYKEGARQLGKELARRGITLVYGGASVGIMGAVADSVLEAGGEVIGV 62 Query: 64 IPHFLKSREIEHKHLTELILVDSMHERKLKMSELAEGFIALPGGPGTMEEYFEIFTWAQL 123 +P FL+ EI H HLT+LI+V++MHERK KM+ELA+GF+ALPGGPGT+EE+FEIFTWAQ+ Sbjct: 63 MPRFLEEPEISHPHLTKLIVVETMHERKAKMAELADGFLALPGGPGTLEEFFEIFTWAQI 122 Query: 124 GLHQKPCGILNVHHYYDPLIALFDQMAREQFMPDKHRSMVLTDVSPEGMIRQFLNYSPPP 183 GLHQKPCG+LN++HY+DPL+ L M+ EQF+ +K+RSM L P ++ QF Y PP Sbjct: 123 GLHQKPCGLLNINHYFDPLVTLLHHMSNEQFLHEKYRSMALVHTDPILLLDQFSTYEPPT 182 Query: 184 VKTY 187 VK Y Sbjct: 183 VKAY 186 >B1YM78.1 B1YM78_EXIS2 Putative uncharacterized protein Length = 193 Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 113/193 (58%), Positives = 150/193 (77%) Query: 1 MKSIAVFCGSRDGASPVYKESAHALGKVLAEHGITLIYGGATVGLMGEVADAALEAGGDV 60 MK +AVFCGS+DGA+P+++++A LG LA H I L+YGG+ VG MG VADA L A G Sbjct: 1 MKKLAVFCGSKDGATPIFRQAATTLGTTLAAHQIGLVYGGSRVGTMGAVADAVLAANGHA 60 Query: 61 IGVIPHFLKSREIEHKHLTELILVDSMHERKLKMSELAEGFIALPGGPGTMEEYFEIFTW 120 +GV+PHFL+ +EI H +LTEL LV+SMH+RK KM+ELA+GFI LPGGPGTMEE+FE+FTW Sbjct: 61 VGVLPHFLQEKEIAHPNLTELHLVESMHDRKAKMAELADGFIILPGGPGTMEEFFEVFTW 120 Query: 121 AQLGLHQKPCGILNVHHYYDPLIALFDQMAREQFMPDKHRSMVLTDVSPEGMIRQFLNYS 180 AQLGLH+KPCGILN+ YYDPL+ALF QM + F+ +H +M++ + PE ++ +F Y Sbjct: 121 AQLGLHEKPCGILNIDGYYDPLVALFQQMETQGFLIPEHAAMLIVESDPERLLERFRTYH 180 Query: 181 PPPVKTYLTDERT 193 P VKTY+ ++T Sbjct: 181 APQVKTYMNTKQT 193 >B1HWZ1.1 B1HWZ1_LYSSC Putative uncharacterized protein Length = 196 Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 108/187 (57%), Positives = 138/187 (73%) Query: 1 MKSIAVFCGSRDGASPVYKESAHALGKVLAEHGITLIYGGATVGLMGEVADAALEAGGDV 60 MKSIAVFCGS GA Y+E A LGK LA+ ITLIYGGA+VG+M VA+ L+ GG V Sbjct: 6 MKSIAVFCGSSIGALDAYREGAIQLGKELAKRQITLIYGGASVGIMATVANTVLQEGGKV 65 Query: 61 IGVIPHFLKSREIEHKHLTELILVDSMHERKLKMSELAEGFIALPGGPGTMEEYFEIFTW 120 IGVIP L+ REI H+ LTELI+V++MHERK KM ELA+GFIALPGGPGT+EE+FE+FTW Sbjct: 66 IGVIPTLLEEREIAHQQLTELIVVNTMHERKSKMMELADGFIALPGGPGTLEEFFEVFTW 125 Query: 121 AQLGLHQKPCGILNVHHYYDPLIALFDQMAREQFMPDKHRSMVLTDVSPEGMIRQFLNYS 180 Q+GL QKPC I N+ Y+D LI+ FD M +EQF+ ++R ++ + ++ Q N+ Sbjct: 126 NQIGLIQKPCAIFNIEQYFDLLISFFDHMQQEQFLKAQYREALIVEAEATALLDQCQNFV 185 Query: 181 PPPVKTY 187 PP +KTY Sbjct: 186 PPAIKTY 192 >C0B1W4.1 C0B1W4_9ENTR Putative uncharacterized protein Length = 192 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 109/187 (58%), Positives = 143/187 (76%) Query: 1 MKSIAVFCGSRDGASPVYKESAHALGKVLAEHGITLIYGGATVGLMGEVADAALEAGGDV 60 +KSIAV+CGS GASP+YKE A K L + ITLIYGGA+VG+MG +AD L GG V Sbjct: 4 IKSIAVYCGSSLGASPIYKEQAIIFAKELVKRNITLIYGGASVGIMGTLADTVLAEGGKV 63 Query: 61 IGVIPHFLKSREIEHKHLTELILVDSMHERKLKMSELAEGFIALPGGPGTMEEYFEIFTW 120 IGVIP L+ REI HK+LTEL +V++MH+RK KM ELAEGF+ALPGG GT+EE+ E+FTW Sbjct: 64 IGVIPTLLEGREISHKNLTELHIVETMHQRKSKMIELAEGFVALPGGFGTLEEFSEVFTW 123 Query: 121 AQLGLHQKPCGILNVHHYYDPLIALFDQMAREQFMPDKHRSMVLTDVSPEGMIRQFLNYS 180 +Q+GLHQKP GILN++ +Y PL+ + D+MA EQF+ +K+R+M + + P ++ +F Y Sbjct: 124 SQIGLHQKPLGILNINQFYSPLLMMIDKMADEQFLHEKYRNMAIVEQCPIQLLDKFETYI 183 Query: 181 PPPVKTY 187 PPVKTY Sbjct: 184 APPVKTY 190 >A3I7P8.1 A3I7P8_9BACI Putative uncharacterized protein Length = 196 Score = 235 bits (599), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 107/187 (57%), Positives = 137/187 (73%) Query: 1 MKSIAVFCGSRDGASPVYKESAHALGKVLAEHGITLIYGGATVGLMGEVADAALEAGGDV 60 M SIAVFCGS GAS Y+E A LGK LA+ ITLIYGGA+VG+M VAD L+ GG V Sbjct: 6 MNSIAVFCGSSIGASDAYREGAIQLGKELAKRQITLIYGGASVGIMATVADTVLQEGGKV 65 Query: 61 IGVIPHFLKSREIEHKHLTELILVDSMHERKLKMSELAEGFIALPGGPGTMEEYFEIFTW 120 IGVIP L+ REI H+ LTELI+V++MHERK KM ELA+GFIALPGGPGT+EE+FE+FTW Sbjct: 66 IGVIPTLLEEREIAHQQLTELIVVNTMHERKSKMMELADGFIALPGGPGTLEEFFEVFTW 125 Query: 121 AQLGLHQKPCGILNVHHYYDPLIALFDQMAREQFMPDKHRSMVLTDVSPEGMIRQFLNYS 180 Q+GL QKPC + N+ Y+D LI+ FD M +EQF+ + R ++ D ++ + ++ Sbjct: 126 NQIGLIQKPCALFNIEQYFDLLISFFDHMQQEQFLKAQFREALIVDADAVALLDKCQSFV 185 Query: 181 PPPVKTY 187 PP +KTY Sbjct: 186 PPAIKTY 192 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,241,076,624 Number of extensions: 51156185 Number of successful extensions: 129360 Number of sequences better than 1.0e-05: 965 Number of HSP's gapped: 129375 Number of HSP's successfully gapped: 989 Length of query: 193 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 65 Effective length of database: 1,854,806,283 Effective search space: 120562408395 Effective search space used: 120562408395 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)