BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0263.0013.p (546 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B9E1U5.1 B9E1U5_CLOK1 Putative uncharacterized protein 422 e-116 A5N8D8.1 A5N8D8_CLOK5 Predicted polyketide synthase 422 e-116 A7GTF8.1 A7GTF8_BACCN Beta-ketoacyl synthase 412 e-113 Q8RJX9.1 Q8RJX9_STIAU StiH protein 190 3e-46 Q1EDB2.1 Q1EDB2_9CYAN HctD 189 7e-46 >B9E1U5.1 B9E1U5_CLOK1 Putative uncharacterized protein Length = 3072 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 215/524 (41%), Positives = 312/524 (59%), Gaps = 10/524 (1%) Query: 1 MLGHSIGEWTAACLAGIVSLDDAARLVAARGRLMSGLPAAXXXAGAMAAIFTSGSALEEL 60 +LGHSIGEW+AACL+GIVSL DAA++VAARG+L+ L ++ G M A+FTSG L+ L Sbjct: 1346 VLGHSIGEWSAACLSGIVSLQDAAKIVAARGKLIEELQSS----GGMCAVFTSGDKLQGL 1401 Query: 61 LQPFAGSLWVAGYNITHQVVSGSSEAVGEFLAVLQAKGIGAKRLNVSQAFHTPLMTPMLE 120 L+ F G++W+A YN THQV+SG A+ +F VL +GIG K+LNVSQAFHTPLM PML Sbjct: 1402 LEAFEGNVWIAAYNGTHQVISGEVNAIEKFGEVLLKEGIGFKKLNVSQAFHTPLMKPMLS 1461 Query: 121 AFRKELEATVFHAPLIPVISNVTAEVIEGPPAAEYWLRHILEAVRFEQSLAYALDQEVSV 180 F+ LE F++P IPV+SNVT E++ P AEYW++HIL+ V+FEQSL Y + V Sbjct: 1462 DFKAVLEGVTFNSPKIPVVSNVTGEIMNKPFDAEYWIQHILQPVKFEQSLKYLSNNSVDT 1521 Query: 181 LIECGPDAILAGMAGGLRHPGKPQVLHALSRKKDPWDTWLGLLGQLHCLGARLDWAAVEQ 240 IECGPD IL+GMA G++ +L A RKKD WDT LG L L CLG ++W EQ Sbjct: 1522 FIECGPDKILSGMARGIKTSNTKIILTASDRKKDSWDTCLGTLSSLFCLGININWEKFEQ 1581 Query: 241 GGLFRKVPLPVYPFEHTIFKPDFGDASGSDSAVHARKWLYEWKWRPEPLAEDNSLAAGAV 300 G + +V LP YPF + ++PDF G ++ W Y W W+ E +SL AG+V Sbjct: 1582 GICYNRVQLPSYPFHRSTYRPDF----GMENIKVPNSWFYSWNWKAELDNSLSSLPAGSV 1637 Query: 301 LVWKGETEFGKELESLLDPERNPVFYISFGNEPHYDGDRSFTIRMDREEDYSTMLRQLPG 360 +++ G+E +S+ D + N ++ +S G+E +D +++F I E+DY + + +P Sbjct: 1638 VIFDDGNGIGEEFKSMFDEKENKIYVVSLGSEYSWDSNKNFIINPLVEKDYIELFKNIPE 1697 Query: 361 AVSAVIHLSNYAREKLGTAELLTDIQALNDGIWSLYFLGQALVLQGLSDVRLVXXXXNKA 420 ++AVIHL N RE +E + D + + + I+S+ +G+AL ++RL+ N Sbjct: 1698 PIAAVIHLWNLKREAW-KSEFVFDGRVIQEDIYSILCIGKALKELNAENIRLL-LATNSG 1755 Query: 421 FRLEGDLEAGNPXXXXXXXVGQVIDLEHEGIHVSVLDMNKEDYPSGREFAAALHTSLLLR 480 + + + NP + +D E+ I+ +D++K++Y S +E A L + Sbjct: 1756 ISVTENYKIFNPHQSITVTLALALDQENTFINSCCIDIDKKEYKSNKELAEILFNEIGKE 1815 Query: 481 ADGESVTAIRSGTAYSRSLERMPEQAAGEVFEPCSGETYLITGG 524 + E + IR G Y R L E + GETYLITGG Sbjct: 1816 INDEGILVIRGGIRYVRDLINTGELNKYSKIQFNDGETYLITGG 1859 >A5N8D8.1 A5N8D8_CLOK5 Predicted polyketide synthase Length = 3072 Score = 422 bits (1085), Expect = e-116, Method: Composition-based stats. Identities = 215/524 (41%), Positives = 312/524 (59%), Gaps = 10/524 (1%) Query: 1 MLGHSIGEWTAACLAGIVSLDDAARLVAARGRLMSGLPAAXXXAGAMAAIFTSGSALEEL 60 +LGHSIGEW+AACL+GIVSL DAA++VAARG+L+ L ++ G M A+FTSG L+ L Sbjct: 1346 VLGHSIGEWSAACLSGIVSLQDAAKIVAARGKLIEELQSS----GGMCAVFTSGDKLQGL 1401 Query: 61 LQPFAGSLWVAGYNITHQVVSGSSEAVGEFLAVLQAKGIGAKRLNVSQAFHTPLMTPMLE 120 L+ F G++W+A YN THQV+SG A+ +F VL +GIG K+LNVSQAFHTPLM PML Sbjct: 1402 LEAFEGNVWIAAYNGTHQVISGEVNAIEKFGEVLLKEGIGFKKLNVSQAFHTPLMKPMLS 1461 Query: 121 AFRKELEATVFHAPLIPVISNVTAEVIEGPPAAEYWLRHILEAVRFEQSLAYALDQEVSV 180 F+ LE F++P IPV+SNVT E++ P AEYW++HIL+ V+FEQSL Y + V Sbjct: 1462 DFKAVLEGVTFNSPKIPVVSNVTGEIMNKPFDAEYWIQHILQPVKFEQSLKYLSNNSVDT 1521 Query: 181 LIECGPDAILAGMAGGLRHPGKPQVLHALSRKKDPWDTWLGLLGQLHCLGARLDWAAVEQ 240 IECGPD IL+GMA G++ +L A RKKD WDT LG L L CLG ++W EQ Sbjct: 1522 FIECGPDKILSGMARGIKTSNTKIILTASDRKKDSWDTCLGTLSSLFCLGININWEKFEQ 1581 Query: 241 GGLFRKVPLPVYPFEHTIFKPDFGDASGSDSAVHARKWLYEWKWRPEPLAEDNSLAAGAV 300 G + +V LP YPF + ++PDF G ++ W Y W W+ E +SL AG+V Sbjct: 1582 GICYNRVQLPSYPFHRSTYRPDF----GMENIKVPNSWFYSWNWKAELDNSLSSLPAGSV 1637 Query: 301 LVWKGETEFGKELESLLDPERNPVFYISFGNEPHYDGDRSFTIRMDREEDYSTMLRQLPG 360 +++ G+E +S+ D + N ++ +S G+E +D +++F I E+DY + + +P Sbjct: 1638 VIFDDGNGIGEEFKSMFDEKENKIYVVSLGSEYSWDSNKNFIINPLVEKDYIELFKNIPE 1697 Query: 361 AVSAVIHLSNYAREKLGTAELLTDIQALNDGIWSLYFLGQALVLQGLSDVRLVXXXXNKA 420 ++AVIHL N RE +E + D + + + I+S+ +G+AL ++RL+ N Sbjct: 1698 PIAAVIHLWNLKREAW-KSEFVFDGRVIQEDIYSILCIGKALKELNAENIRLL-LATNSG 1755 Query: 421 FRLEGDLEAGNPXXXXXXXVGQVIDLEHEGIHVSVLDMNKEDYPSGREFAAALHTSLLLR 480 + + + NP + +D E+ I+ +D++K++Y S +E A L + Sbjct: 1756 ISVTENYKIFNPHQSITVTLALALDQENTFINSCCIDIDKKEYKSNKELAEILFNEIGKE 1815 Query: 481 ADGESVTAIRSGTAYSRSLERMPEQAAGEVFEPCSGETYLITGG 524 + E + IR G Y R L E + GETYLITGG Sbjct: 1816 INDEGILVIRGGIRYVRDLINTGELNKYSKIQFNDGETYLITGG 1859 >A7GTF8.1 A7GTF8_BACCN Beta-ketoacyl synthase Length = 3099 Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust. Identities = 219/522 (41%), Positives = 306/522 (58%), Gaps = 15/522 (2%) Query: 1 MLGHSIGEWTAACLAGIVSLDDAARLVAARGRLMSGLPAAXXXAGAMAAIFTSGSALEEL 60 MLGHS+GEW AACL+ +++L DAARLVA RG LM+ + GAM AIF+S + +E L Sbjct: 1350 MLGHSVGEWVAACLSEMITLQDAARLVAIRGELMNEIQTT----GAMTAIFSSIATIEPL 1405 Query: 61 LQPFAGSLWVAGYNITHQVVSGSSEAVGEFLAVLQAKGIGAKRLNVSQAFHTPLMTPMLE 120 L+PF SLW AGYNITHQV+SG +EA+ +FL++L+ KGI K+L VSQAFHTPLM ML Sbjct: 1406 LEPFKDSLWFAGYNITHQVISGQAEAMEKFLSLLEKKGIVFKKLKVSQAFHTPLMETMLA 1465 Query: 121 AFRKELEATVFHAPLIPVISNVTAEVIEGPPAAEYWLRHILEAVRFEQSLAYALDQEVSV 180 F+KEL A F+ P IP++SNVTAE I P EYWL HIL V+FEQS+ Y LD+ +++ Sbjct: 1466 PFKKELSAITFNKPKIPIVSNVTAEYISQPIHPEYWLEHILGTVKFEQSMKYVLDKGINI 1525 Query: 181 LIECGPDAILAGMAGGLRHPGKPQVLHALSRKKDPWDTWLGLLGQLHCLGARLDWAAVEQ 240 +E GPD +L MA GL ++ + RKK+ WD ++ + +L+ LG +DW + Sbjct: 1526 FVEAGPDKVLTSMANGLISYKDKCLISMIERKKENWDVYVNAVSKLYTLGVNIDWKTFMK 1585 Query: 241 GGLFRKVPLPVYPFEHTIFKPDFGDASGSDSAVHARKWLYEWKWRPE-PLAEDNSLAAGA 299 +V LP YPFEH IFKPDFG+ + WLYEWKW E PL +N G+ Sbjct: 1586 DYGNERVILPSYPFEHKIFKPDFGE------ELRFMDWLYEWKWEMETPLYIEND-KRGS 1638 Query: 300 VLVWKGETEFGKELESLLDPERNPVFYISFGNEPHYDGDRSFTIRMDREEDYSTMLRQLP 359 +LV+ E + GKE+ +L+ V+ + GNE HYDGD FTIR + EDY ML+ + Sbjct: 1639 ILVFDDEQQVGKEVCGILEQINTSVYVVIPGNEFHYDGDTRFTIRPESIEDYMMMLQHIQ 1698 Query: 360 GAVSAVIHLSNYAREKLGTAELLTDIQALNDGIWSLYFLGQALVLQGLSDVRLVXXXXNK 419 G ++IHL N +E + L D AL +S+ + +AL ++ +V + ++ Sbjct: 1699 GDSISIIHLWNGTKESVTPTLFLQDESALFQTSYSIILMAKALKIKAYKNVEFI-VVTDR 1757 Query: 420 AFRLEGDLEAGNPXXXXXXXVGQVIDLEHEGIHVSVLDMNKEDYPSG-REFAAALHTSLL 478 AF + D E P +GQVID E+ +LD++ Y + E A + L Sbjct: 1758 AFAVLQDEEIQKPQQSISAVIGQVIDQENSEFSSCILDVDNRAYENKFAELAELIVRELS 1817 Query: 479 LRADGESVTAIRSGTAYSRSLERMPEQAAGEVFEPCSGETYL 520 + E++ AIR G + R LER+ E+ ETY+ Sbjct: 1818 MGRQEEAIVAIRGGKRFVRKLERIVPSKKQEI-TIQDNETYV 1858 >Q8RJX9.1 Q8RJX9_STIAU StiH protein Length = 1604 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 119/307 (38%), Positives = 162/307 (52%), Gaps = 25/307 (8%) Query: 1 MLGHSIGEWTAACLAGIVSLDDAARLVAARGRLMSGLPAAXXXAGAMAAIFTSGSALEEL 60 ++GHS+GE+ AAC+AG+ SL+D RL+A RGRLM LP G MAA+F + + E Sbjct: 657 VMGHSVGEYVAACVAGVFSLEDGLRLIAERGRLMQALPPD----GDMAAVFAEEARVVEA 712 Query: 61 LQPFAGSLWVAGYN-ITHQVVSGSSEAVGEFLAVLQAKGIGAKRLNVSQAFHTPLMTPML 119 + PF+ L +A N T V+SG A+ L L A+GI A+RLNVS AFH+PLM P++ Sbjct: 713 IAPFSSQLSIAAVNGPTETVISGEKGALAAVLERLSAQGIQARRLNVSHAFHSPLMQPIV 772 Query: 120 EAFRKELEATVFHAPLIPVISNVTAEVIEGP--PAAEYWLRHILEAVRFEQSLAYALDQE 177 + F + + FH P +ISNVT + ++EYW RH+L VRF SL + Sbjct: 773 DTFAGVVASVTFHPPQFELISNVTGRPADPQLLSSSEYWCRHLLAPVRFWDSLQSLHQRG 832 Query: 178 VSVLIECGPDAILAGMA-GGLRHPGKPQVLHALSRKKDPWDTWLGLLGQLHCLGARLDWA 236 + +E GP A LA M G G L +L + + W L LG+L+ G ++DW Sbjct: 833 SRLFLEIGPGATLASMGRRGFSQDGSCLWLSSLQKDRGDWTHLLRALGELYASGLKVDWQ 892 Query: 237 AVEQGGLFRKVPLPVYPF--EHTIFKPDFGDASGSDSAVHAR---------------KWL 279 A +QG V LP YPF E FK A +AV AR WL Sbjct: 893 AFDQGYTRHHVTLPTYPFQRERHWFKLSRSSAIQPVAAVGARDLGPSPESGEAELPGDWL 952 Query: 280 YEWKWRP 286 YE +W+P Sbjct: 953 YELEWKP 959 >Q1EDB2.1 Q1EDB2_9CYAN HctD Length = 1924 Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 102/289 (35%), Positives = 158/289 (54%), Gaps = 6/289 (2%) Query: 1 MLGHSIGEWTAACLAGIVSLDDAARLVAARGRLMSGLPAAXXXAGAMAAIFTSGSALEEL 60 ++GHS+GE+ AAC+AG+ SL+D +L+A RG+LM LP G M ++ S S + E+ Sbjct: 624 VIGHSVGEYVAACVAGVFSLEDGLKLIAMRGQLMQQLPPG----GEMLSLLASESQVREV 679 Query: 61 LQPFAGSLWVAGYN-ITHQVVSGSSEAVGEFLAVLQAKGIGAKRLNVSQAFHTPLMTPML 119 + P+ + +A N + V+SG SEA+ E + + +GI AK L VS AFH+PLM PML Sbjct: 680 IAPYGEQVAIAALNGPSSIVISGKSEAIQEIYSKVSTQGIKAKFLQVSHAFHSPLMEPML 739 Query: 120 EAFRKELEATVFHAPLIPVISNVTAEVI-EGPPAAEYWLRHILEAVRFEQSLAYALDQEV 178 F +H P IP+ISNVT ++I + EYW+ HI + VRF + + Sbjct: 740 GQFEVAAWQISYHKPQIPLISNVTGQLIGDDTSTPEYWVNHIRQPVRFADGMQTLYQEGC 799 Query: 179 SVLIECGPDAILAGMAGGLRHPGKPQVLHALSRKKDPWDTWLGLLGQLHCLGARLDWAAV 238 + +E GP AIL GM + L +L + ++ W L LG+L+ G +DW+ + Sbjct: 800 QIFLEIGPQAILLGMGRQCLPEDRGVWLPSLRKDREDWQQLLESLGELYVRGLEVDWSGL 859 Query: 239 EQGGLFRKVPLPVYPFEHTIFKPDFGDASGSDSAVHARKWLYEWKWRPE 287 ++ KV LP YPF+ + + + + WLYE +W+P+ Sbjct: 860 DKDYTREKVVLPTYPFQRERYWTKATNFTNFVDQEEFQDWLYEVEWQPQ 908 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,302,949,051 Number of extensions: 139579741 Number of successful extensions: 340330 Number of sequences better than 1.0e-05: 4244 Number of HSP's gapped: 331258 Number of HSP's successfully gapped: 4966 Length of query: 546 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 405 Effective length of database: 1,732,333,088 Effective search space: 701594900640 Effective search space used: 701594900640 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)