BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0263.0007.p (514 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6BJ12.1 A6BJ12_9FIRM Putative uncharacterized protein 414 e-114 C0CR63.1 C0CR63_9FIRM Putative uncharacterized protein 400 e-109 C0B5B7.1 C0B5B7_9FIRM Putative uncharacterized protein 396 e-108 A8RQW9.1 A8RQW9_9CLOT Putative uncharacterized protein 315 1e-83 B0PES5.1 B0PES5_9FIRM Putative uncharacterized protein 308 7e-82 >A6BJ12.1 A6BJ12_9FIRM Putative uncharacterized protein Length = 499 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 216/506 (42%), Positives = 319/506 (63%), Gaps = 11/506 (2%) Query: 11 QVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDM 70 +V L+ +++SK F A+ VS NI GE+ LIGENGSGKST++ M++G+ G Sbjct: 3 EVRLQVKHVSKNFGITKALKDVSFNINKGEVHALIGENGSGKSTMTNMLTGIYTLESGQF 62 Query: 71 RIAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKRGFVDHKRMNQ 130 + G PK+ ++A E +S+IVQE GT+ L++AEN+FLG E +FV G + MN+ Sbjct: 63 ILDGKEVHPKNQVEANEEGISIIVQELGTLSGLTVAENIFLGHEDQFVHLGIKNTAAMNK 122 Query: 131 EAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRVL 190 +A L+ ++ + FE RKL+EI +A Y++P + +VDETTTALS EGR Sbjct: 123 KANELLQSYGFDKIKAGDMIDDYNFEDRKLVEIVKATYFNPKIVVVDETTTALSQEGREE 182 Query: 191 IHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMVG 250 +++ M R+RD V+FISHDLPE+++ D +T++RDG I T++ D NE+ +K+ MVG Sbjct: 183 LYKQMNRVRDNGNTVIFISHDLPEILDKSDTITILRDGVYIDTVKSADVNEDDLKKLMVG 242 Query: 251 RVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXL-RDIDLELHKGEXXXXXXXXXXXMHELG 309 R + G+YYR+DY ++V++ L DI +LHKGE MHE+G Sbjct: 243 REVTGDYYRSDYGEKVSDEVVLSVKNVTVPGLIEDISFDLHKGEILGFGGLSESGMHEIG 302 Query: 310 KLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIMEASI 369 K ++G +GEV++ DG +N I TA+ I Y SKDRD E++++ SI Sbjct: 303 KAIFGASYDREGEVVL----ADGT-----HINDIPTAIKHSIAYTSKDRDNESVVLNQSI 353 Query: 370 KDNLVLSALDQLSRFGLILPGREKR-FAAEQMEELQIKASGMNQKVGELSGGNKQKVSFG 428 DN+ L +LD+L+ IL +++R FA + +++ +K + +NQ V LSGGNKQKV Sbjct: 354 GDNICLPSLDELANKAHILSDKKRREFADKYAKQMSVKMNDVNQFVSNLSGGNKQKVVLA 413 Query: 429 KWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDRILM 488 +WIG S I++LDSPTRG+D+ VK +YQL+ +++ G SI+MISEEL ELIGMSDRI++ Sbjct: 414 RWIGKDSDIVVLDSPTRGIDIKVKQDIYQLMNQMRKNGKSIIMISEELMELIGMSDRIII 473 Query: 489 MKDGRIRKEFARSENLSEAMLIEHMI 514 MKDG+I E R++NL E LI M+ Sbjct: 474 MKDGKISGELERNQNLDENGLISMMV 499 >C0CR63.1 C0CR63_9FIRM Putative uncharacterized protein Length = 501 Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust. Identities = 215/510 (42%), Positives = 309/510 (60%), Gaps = 12/510 (2%) Query: 8 MDKQVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATG 67 M +V L+ +N+ K F AV VS NI GE+ LIGENGSGKST++ M++G+ P Sbjct: 1 MSNEVRLQVKNVCKSFGITKAVQNVSFNINKGEVHALIGENGSGKSTLTNMLTGIYPIDS 60 Query: 68 GDMRIAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKRGFVDHKR 127 G + G PK+ ++A VS+IVQE GT+ L++AEN+FLG E RFVK G + Sbjct: 61 GTFILDGKEIHPKNQVEANNEGVSIIVQELGTLSGLTVAENIFLGHEDRFVKAGIKNTNA 120 Query: 128 MNQEAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEG 187 MN+EA L+ + + FE RKLIEI +A Y+ P + ++DETTTALS EG Sbjct: 121 MNKEADALLKKYGFERIKAAHMIDEYNFEDRKLIEIVKATYFSPKIVVIDETTTALSQEG 180 Query: 188 RVLIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQS 247 R +++ M R+R + ++FISHDLPE++E D +TV+RDG I T++ +D E+ +K+ Sbjct: 181 REELYKHMERIRKEGNTIIFISHDLPEILEKSDTITVLRDGVYIDTVKSKDMTEDDLKKL 240 Query: 248 MVGRVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXL-RDIDLELHKGEXXXXXXXXXXXMH 306 MVGR + G YYRTDY ++V++ L ++I +LHKGE MH Sbjct: 241 MVGREMTGKYYRTDYGEKVSDEVVLSVKNVSVPGLIQNISFDLHKGEILGFGGLSESGMH 300 Query: 307 ELGKLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIME 366 E+GK ++G +G V + DG ++ I TA+ I Y SKDRD E++++ Sbjct: 301 EVGKAIFGASFDREGSVTL----ADGT-----QIKDIPTAIKHEIAYTSKDRDNESIVIN 351 Query: 367 ASIKDNLVLSALDQLSRFGLILPGREK--RFAAEQMEELQIKASGMNQKVGELSGGNKQK 424 SI DN+ L +L +L L +K FA + +E+ +K +Q V ELSGGNKQK Sbjct: 352 QSIGDNICLPSLGRLGSGPLKFLNYKKLNEFANKYAKEISVKMVNTDQFVSELSGGNKQK 411 Query: 425 VSFGKWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSD 484 V +WIG S I++LDSPTRG+D+ VK +YQL+ ++++G SI+MISEEL ELIGM D Sbjct: 412 VVLARWIGRDSDIIVLDSPTRGIDIKVKQDIYQLMDQMRKDGKSIIMISEELMELIGMCD 471 Query: 485 RILMMKDGRIRKEFARSENLSEAMLIEHMI 514 RIL+MKDG+I + R +++E LI M+ Sbjct: 472 RILIMKDGKISGQLDRDRDMNENSLISMMV 501 >C0B5B7.1 C0B5B7_9FIRM Putative uncharacterized protein Length = 499 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 208/506 (41%), Positives = 308/506 (60%), Gaps = 11/506 (2%) Query: 11 QVFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDM 70 +V L+ +N+ K F AV VS N+ GE+ LIGENGSGKST++ M++G+ G Sbjct: 3 EVRLQVKNLCKNFGITKAVQNVSFNVNKGEVHALIGENGSGKSTLTNMLTGIYSIGSGQF 62 Query: 71 RIAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFVKRGFVDHKRMNQ 130 + G PK+ ++A VS+IVQE GT+ L++AEN+FLG E +FV G + MN+ Sbjct: 63 ILDGKEIHPKNQVEANNEGVSIIVQELGTLSGLTVAENIFLGHEDQFVHFGIKNTNAMNK 122 Query: 131 EAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRVL 190 +A L+ + + FE RKL+EI +A Y+DP + ++DETTTALS EGR Sbjct: 123 KATELLKKYGFDRIKAADMIDHYNFEDRKLVEIVKATYFDPKIVVIDETTTALSQEGREE 182 Query: 191 IHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMVG 250 +++ M R++ V+FISHDLPE+++ D +T++RDG I T++ +D E+ +K+ MVG Sbjct: 183 LYKHMERIKKSGNTVIFISHDLPEILDKSDTITILRDGVYIDTVKSKDVTEDDLKKLMVG 242 Query: 251 RVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXL-RDIDLELHKGEXXXXXXXXXXXMHELG 309 R + G+YYR DY ++V++ L D+ +LHKGE MHE+G Sbjct: 243 REVTGDYYRADYGEKVSDEVVLSVKNVTVPGLIEDVTFDLHKGEILGFGGLSESGMHEIG 302 Query: 310 KLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIMEASI 369 K ++G G V + DG ++N I TA+ I Y SKDRD E++++ SI Sbjct: 303 KAIFGASYDRTGSVTL----ADGT-----QINDIPTAIKHSIAYTSKDRDNESVVLNQSI 353 Query: 370 KDNLVLSALDQLS-RFGLILPGREKRFAAEQMEELQIKASGMNQKVGELSGGNKQKVSFG 428 DN+ L +LD+L+ + L+ + K FA + +++ +K +NQ V LSGGNKQKV Sbjct: 354 GDNICLPSLDELAGKSHLLSDKKRKEFADKYAKQMSVKMVDVNQFVSNLSGGNKQKVVLA 413 Query: 429 KWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDRILM 488 +WIG S I++LDSPTRG+D+ VK +YQL+ +++ G SI+MISEEL ELIGM DRI++ Sbjct: 414 RWIGKDSDIVVLDSPTRGIDIKVKQDIYQLMNQMRKNGKSIIMISEELMELIGMCDRIVI 473 Query: 489 MKDGRIRKEFARSENLSEAMLIEHMI 514 MKDG+I + R +NL E LI M+ Sbjct: 474 MKDGKISGQLDRDKNLDENGLISMMV 499 >A8RQW9.1 A8RQW9_9CLOT Putative uncharacterized protein Length = 507 Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 174/500 (34%), Positives = 290/500 (58%), Gaps = 16/500 (3%) Query: 12 VFLETRNISKKFNDVTAVNQVSMNIRLGEIRGLIGENGSGKSTISAMMSGLLPATGGDMR 71 V LE + I+K ++ V ++ V++ +R GEI L+GENG+GKST+ +++G++ A G+ Sbjct: 14 VLLEMKEINKSYSGVQVLHNVNLKVRKGEIHALMGENGAGKSTLIKIITGIVQADSGEKT 73 Query: 72 IAGALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEE--KRFVKRGFVDHKRMN 129 G + + ++ QE +P+L++A+N+F+ E K+F GFVD K+ + Sbjct: 74 YKGEPLNISHPSQIYHYGIGIVHQEFNLLPDLNVAQNIFIAREPMKKF---GFVDEKKSD 130 Query: 130 QEAKRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRV 189 Q+A++ L+ + L ++D+ + + L +++L+EIA+AL YD L I+DE T+AL+ Sbjct: 131 QDAQKLLDRLQL-KIDIHKKVIQLSVAEQQLVEIAKALSYDCELLILDEPTSALADSEAE 189 Query: 190 LIHQIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMV 249 ++ I+ LR+Q A++++SH + ++ + D +TV+RDG+ I D E + +V Sbjct: 190 VLFGILEHLREQGVAIIYVSHRMSDIKRIVDRVTVLRDGHFIGEHLLSDITEEQLISEIV 249 Query: 250 GRVIEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELHKGEXXXXXXXXXXXMHELG 309 GR +E Y+ GEQ L L DI E +KGE EL Sbjct: 250 GRKLEA-YFPKKPKYKRGEQTLEVKGLSVKGLLEDISFEAYKGEILGIAGLMGAGRTELA 308 Query: 310 KLMYGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIMEASI 369 ++G L+P GE+IV+ +++ K +S + A+ + IGY ++DR ++ L++ I Sbjct: 309 HAIFGKLRPTAGEIIVHGKKQ--------KFDSPQKAIRAGIGYTTEDRKRDGLMLNQDI 360 Query: 370 KDNLVLSALDQLSRF-GLILPGREKRFAAEQMEELQIKASGMNQKVGELSGGNKQKVSFG 428 K N+++S+ DQL F GL+ G R E +E++ IK +G NQ +G LSGGN+QK Sbjct: 361 KSNILISSYDQLVNFWGLVKEGMANRRTDEYIEKMNIKTTGRNQNIGSLSGGNQQKAVLA 420 Query: 429 KWIGNHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDRILM 488 KW+ + I D PTRG+DVG K +YQL+Y+L + G +++MIS ELPE++GMSDRIL+ Sbjct: 421 KWLSANVDIFFFDEPTRGIDVGAKMEIYQLMYTLVENGVTVIMISSELPEILGMSDRILV 480 Query: 489 MKDGRIRKEFARSENLSEAM 508 M G++ + SE E + Sbjct: 481 MSHGKLAADLDISEATQEKI 500 >B0PES5.1 B0PES5_9FIRM Putative uncharacterized protein Length = 501 Score = 308 bits (790), Expect = 7e-82, Method: Compositional matrix adjust. Identities = 188/502 (37%), Positives = 276/502 (54%), Gaps = 12/502 (2%) Query: 17 RNISKKFNDVTAVNQVSMNI---RLGEIRGLIGENGSGKSTISAMMSGLLPATGGDMRIA 73 + I K F A++ S I + GEI GL+GENG+GKST+ ++ G+ T G+M + Sbjct: 8 KGIKKYFPGTKALDWNSDQIVEFKAGEIHGLVGENGAGKSTLFQILMGIHDMTEGEMTLF 67 Query: 74 GALYRPKSTLDAREHKVSMIVQETGTIPELSIAENMFLGEEKRFV-KRGFVDHKRMNQEA 132 YRP S+ +A E V++I+Q+ L++AEN+FLG +K F+ K G +D KR N A Sbjct: 68 EKPYRPSSSREAEEAGVAIIMQQPNFAFNLTVAENIFLGRDKTFLNKAGGIDWKRQNAAA 127 Query: 133 KRALELIDLHELDVTRPMYTLGFEQRKLIEIARALYYDPTLFIVDETTTALSHEGRVLIH 192 L + T + +L FE+RK +EIARAL + +VDET+ A+S E ++ Sbjct: 128 AEILHEYHYDHIKPTDIVGSLKFEERKQVEIARALSVRAKVLLVDETSAAISKESVEGLY 187 Query: 193 QIMRRLRDQNKAVLFISHDLPELMEVCDVLTVMRDGNLITTIEKQDFNENHIKQSMVGRV 252 ++R ++Q V++ISH + E+ +CD LTV+RDG LIT + + I SMVGR Sbjct: 188 ALLREQKEQGVCVIYISHFIDEVYSLCDRLTVLRDGKLITRMNVCETTPQMIINSMVGRN 247 Query: 253 IEGNYYRTDYDGSYGEQVLIXXXXXXXXXLRDIDLELHKGEXXXXXXXXXXXMHELGKLM 312 I YR++ + S GE ++ +I+L + GE LG+ + Sbjct: 248 ISAENYRSEDNSSIGEVMVELRDFTMEGEFENINLTVRAGEIVGIAGIGGCGSEALGRAL 307 Query: 313 YGGLKPVQGEVIVYEEREDGAPAIPRKLNSIKTAMASRIGYVSKDRDKETLIMEASIKDN 372 +G + GE+I ++ S A+ S IGY+ KDRD E L + N Sbjct: 308 FGYERATGGELIY--------KGTSGRMKSPLEAIRSHIGYIPKDRDTEGLFLIYDSVWN 359 Query: 373 LVLSALDQLSRFGLILPGREKRFAAEQMEELQIKASGMNQKVGELSGGNKQKVSFGKWIG 432 + + L +SR G+I +E+ A + ++E +IK V LSGGN+QKV KWI Sbjct: 360 ISSANLTAMSRAGMIDHKKERETARKAVKEFRIKTPSELTNVSSLSGGNRQKVVIAKWIE 419 Query: 433 NHSKILILDSPTRGVDVGVKTTMYQLLYSLKQEGYSILMISEELPELIGMSDRILMMKDG 492 NHS+ LI+ SPTRGVDVG K +Y L LK EG SIL+IS+ELPELIGM DRI K G Sbjct: 420 NHSEFLIVCSPTRGVDVGAKYEIYHFLERLKNEGKSILLISDELPELIGMCDRIYTFKSG 479 Query: 493 RIRKEFARSENLSEAMLIEHMI 514 + EF R ++ SE +++ M+ Sbjct: 480 KNSGEFTRGKDFSEELIMAKMV 501 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.375 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,738,327,959 Number of extensions: 109348778 Number of successful extensions: 729545 Number of sequences better than 1.0e-05: 74044 Number of HSP's gapped: 662146 Number of HSP's successfully gapped: 87135 Length of query: 514 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 374 Effective length of database: 1,741,754,103 Effective search space: 651416034522 Effective search space used: 651416034522 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)