BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0261.0005.p (890 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9Z4I1.1 Q9Z4I1_PAEBA Cellulase EC=3.2.1.4 899 0.0 Q65JI9.1 Q65JI9_BACLD Putative uncharacterized protein 803 0.0 Q6SYB5.1 Q6SYB5_BACLI Cellulase EC=3.2.1.4 800 0.0 Q9R9H6.1 Q9R9H6_BACPU Endoglucanase 774 0.0 A6N866.1 A6N866_BACPU Endoglucanase 773 0.0 >Q9Z4I1.1 Q9Z4I1_PAEBA Cellulase EC=3.2.1.4 Length = 997 Score = 899 bits (2323), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/721 (61%), Positives = 534/721 (74%), Gaps = 18/721 (2%) Query: 12 AKAEGSGYNYAEALQKSIYFYETQRSGELPDNNRVEWRGDSGLQDGADVGHDLTGGWYDA 71 A A +NYAEALQK+IYFYE QRSG LP NNRVEWRGDSG+QDGADVG DLTGGWYDA Sbjct: 32 ADAAAGDHNYAEALQKAIYFYEAQRSGPLPANNRVEWRGDSGMQDGADVGVDLTGGWYDA 91 Query: 72 GDHVKFGFPMAYTATMLAWSVYEYKEGYVQSGQLDEILDNIRWATDYFMKAHTAPNELWG 131 GDHVKFGFPMA +ATMLAWSV EY +GY Q+GQL+EI DNIRWATDYFMKAHT PNELWG Sbjct: 92 GDHVKFGFPMAASATMLAWSVVEYADGYEQAGQLEEIKDNIRWATDYFMKAHTKPNELWG 151 Query: 132 QVGNGTADHNWWGAAEVMPMARPSYKIDAAHPGSDLXXXXXXXXXXXXIIFRDSDAAYAD 191 QVG G DH WWG AEVM M RPS+KIDA+ PGSDL I+F DSD Y+ Sbjct: 152 QVGAGNTDHAWWGPAEVMQMNRPSFKIDASCPGSDLAAETAAALAASSIVFADSDPVYSA 211 Query: 192 KLLLHAKQLYNFADTYRGVYSESITDATQYYKSWSGYADELSWGGVWLYMATGDQTYLDK 251 KLL HAK+LYNFADTYRG Y++ ITDA +Y SW+GY DEL+WGG WLY+AT D YL K Sbjct: 212 KLLQHAKELYNFADTYRGKYTDCITDAAAFYNSWTGYEDELAWGGAWLYLATNDNAYLSK 271 Query: 252 AVTASNSWSTN-QSGQWGYQWTQSWDDKHYGAQLLLSRITDD------PKFIQSTERNMQ 304 A++A++ WST+ S W Y WTQ WD KHYGAQ+LL+RIT + KFIQSTERN+ Sbjct: 272 ALSAADRWSTSGGSANWPYTWTQGWDSKHYGAQILLARITSNLNMPEATKFIQSTERNLD 331 Query: 305 FWTTGVNGTTDRVAYTPGGLAHLDQWGALRYAATQAFLAFVYADWVGDPVKQNTARTFAE 364 +WT G NG RV YTPGGLA LDQWG+LRYAA AF++FVY+DWV DPVK++ + FA Sbjct: 332 YWTVGTNG--GRVKYTPGGLAWLDQWGSLRYAANAAFISFVYSDWVSDPVKKSRYQNFAT 389 Query: 365 RQITYMLGDNPRSSSYVIGFGSNALQHPHHRTSHGSWSDSQTTPANHRHVLYGALVGGPS 424 QI Y+LGDNPR SSYV+G+G N+ QHPHHRT+H SW +++ PANHRH+LYGA+VGGP+ Sbjct: 390 SQINYILGDNPRQSSYVVGYGQNSPQHPHHRTAHSSWMNNEDIPANHRHILYGAMVGGPN 449 Query: 425 KTDSYTDTISDYVSNEVATDYNSAFTGALAKMMLLHGQGQQPLENFPPAETREDEMFTET 484 +D YTD I DYVSNEVATDYN+ FTGALAKM LL+GQ QPL NFP E + DE F E Sbjct: 450 ASDQYTDDIGDYVSNEVATDYNAGFTGALAKMNLLYGQNHQPLANFPAPEVKGDEYFVEA 509 Query: 485 SVNASGSNFVEIRALLNNRSGWPARSSSQMSFYYYVDLSEAAAAGYGPEDITVKAGGYNQ 544 +V +SGSN+ EIRALLNNRSGWPAR Q+SF Y++DLSE AAG D+ V ++ Sbjct: 510 AVRSSGSNYTEIRALLNNRSGWPARMGDQLSFKYFLDLSEVYAAGRTVSDVQVTVSS-SE 568 Query: 545 GGTVSQLLPFDEANHIYYTKIDFTGTPVYPGGQSAYRKEIQFRISAPLNTAFWDNTNDFS 604 G TVSQ + D A IY +F+ T +YPGG+ YRKE+QFRI+ P W+ ND S Sbjct: 569 GATVSQPVVVDAAKRIYAITANFSNTKIYPGGEGNYRKEVQFRITGPQGA--WNPANDPS 626 Query: 605 FKGVASGASSPVKNPYIPVFDAGVKVYGELPSGGNPGEPQVPGRPSGLQATAGNASVSLA 664 ++ + +G +PVK+ YIPV+DAGVKV G+ P G P VP P+G+QA AGN+ V+L Sbjct: 627 YQNLTTG--NPVKSNYIPVYDAGVKVSGQEP-GVTP--VAVPAAPAGVQAVAGNSQVALN 681 Query: 665 WNAVSGATGYTIKRSLVNGGPYAAIGT-VTGTTYSDSGLVNGVDYYYVVTASNSVGEGTA 723 W+A +GA YT+KR+ V+GGPY + V G TY+++GL NG YYYVVTA NS GE A Sbjct: 682 WSASAGAVSYTVKRAEVSGGPYTTVAAGVNGLTYTNTGLTNGKTYYYVVTAVNSAGESPA 741 Query: 724 S 724 S Sbjct: 742 S 742 Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/265 (41%), Positives = 152/265 (57%), Gaps = 13/265 (4%) Query: 636 SGGNPGEPQVPGRPSG---------LQATAGNASVSLAWNAVSGATGYTIKRSLVNGGPY 686 +G +P QV G P L TAGN L+W A SGA+ YT++R+ V GG Y Sbjct: 736 AGESPASVQVSGMPQAATTVPGAVTLSGTAGNNQNMLSWTAASGASSYTVQRA-VAGGTY 794 Query: 687 AAIGT-VTGTTYSDSGLVNGVDYYYVVTASNSVGEGTASXXXXXXXXXXXXXXKGDLRVQ 745 + T + Y+D+ +NG Y Y V A N+ G+ ++ G L VQ Sbjct: 795 TDVATGLAVLNYNDTTALNGTSYSYRVAAVNASGQTLSNVVMLTPSGPPVS--TGTLEVQ 852 Query: 746 YRTNDTSPGDAQIRSQFRIVNTGKEAVALSGLKLRYYYTVDGDKPQEFHCDYAVLGSGNL 805 YR+ + + QF + NTG +A+ LS +K+RYY+T DG + F CDYA +GS N+ Sbjct: 853 YRSGGSGNSSNAVTPQFNLKNTGTQAIDLSTVKIRYYFTKDGTEELSFWCDYAQVGSANV 912 Query: 806 SGSFVKLAAPAALADSYVEISFAPGAGNLAPGADTGEIQVRINKTDWTPYNESNDYSYSG 865 G FV + AD+YVEISF GAG+LA GA+TG IQ R +K +W+ +++SNDYSY Sbjct: 913 QGMFVAVNPAKGTADTYVEISFTSGAGSLAAGAETGVIQTRFSKNNWSAFDQSNDYSYDA 972 Query: 866 TQQAFADWDKVTLHREGTLVWGLEP 890 ++ AFA W+KVT ++ T VWGLEP Sbjct: 973 SKTAFAAWNKVTAYQGNTQVWGLEP 997 >Q65JI9.1 Q65JI9_BACLD Putative uncharacterized protein Length = 654 Score = 803 bits (2074), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/627 (61%), Positives = 474/627 (75%), Gaps = 9/627 (1%) Query: 11 VAKAEGSGYNYAEALQKSIYFYETQRSGELPDNNRVEWRGDSGLQDGADVGHDLTGGWYD 70 A AE +NYAE LQKS+ FYE QRSG LP+N+R+ WRGDSGL+DG DVG DLTGGWYD Sbjct: 33 AASAEEYPHNYAELLQKSLLFYEAQRSGRLPENSRLNWRGDSGLEDGKDVGLDLTGGWYD 92 Query: 71 AGDHVKFGFPMAYTATMLAWSVYEYKEGYVQSGQLDEILDNIRWATDYFMKAHTAPNELW 130 AGDHVKFG PMAY+A +L+WSVYEY++ Y +SGQLD LDNI+WATDYF+KAHTAP ELW Sbjct: 93 AGDHVKFGLPMAYSAAILSWSVYEYRDAYKESGQLDAALDNIKWATDYFLKAHTAPYELW 152 Query: 131 GQVGNGTADHNWWGAAEVMPMARPSYKIDAAHPGSDLXXXXXXXXXXXXIIFRDSDAAYA 190 GQVGNG DH WWG AEVMPM RP+YKIDA PGSDL IIF+ +D++Y+ Sbjct: 153 GQVGNGALDHAWWGPAEVMPMKRPAYKIDAGCPGSDLAGGTAAALASASIIFKPTDSSYS 212 Query: 191 DKLLLHAKQLYNFADTYRGVYSESITDATQYYKSWSGYADELSWGGVWLYMATGDQTYLD 250 +KLL HAKQLY+FAD YRG YS+ ITDA QYY SWSGY DEL+WG VWLY+AT +Q YLD Sbjct: 213 EKLLAHAKQLYDFADRYRGKYSDCITDAQQYYNSWSGYKDELTWGAVWLYLATEEQQYLD 272 Query: 251 KAVTASNSWSTNQSGQWGYQWTQSWDDKHYGAQLLLSRITDDPKFIQSTERNMQFWTTGV 310 KA+ + + W W Y+WT SWDD YGAQLLL+R+T+D +F++S ERN+ +W+TG Sbjct: 273 KALASVSDW--GDPANWPYRWTLSWDDVTYGAQLLLARLTNDSRFVKSVERNLDYWSTGY 330 Query: 311 --NGTTDRVAYTPGGLAHLDQWGALRYAATQAFLAFVYADWVGDPVKQNTARTFAERQIT 368 NG+ +R+ YTPGGLA L+QWG+LRYA+ AFLAFVY+DWV D K R FA RQ Sbjct: 331 SHNGSIERITYTPGGLAWLEQWGSLRYASNAAFLAFVYSDWV-DTEKAKRYRDFAVRQTE 389 Query: 369 YMLGDNPRSSSYVIGFGSNALQHPHHRTSHGSWSDSQTTPANHRHVLYGALVGGPSKTDS 428 YMLGDNP+ S+V+G+G N +HPHHRT+HGSW++ P NHRH LYGALVGGP + DS Sbjct: 390 YMLGDNPQQRSFVVGYGKNPPKHPHHRTAHGSWANQMNVPENHRHTLYGALVGGPGRDDS 449 Query: 429 YTDTISDYVSNEVATDYNSAFTGALAKMMLLHGQGQQPLENFPPAETREDEMFTETSVNA 488 Y D I+DY SNEVA DYN+AFTG +AKM L G+G PL +FP ET EDE F E S+N+ Sbjct: 450 YRDDITDYASNEVAIDYNAAFTGNVAKMFQLFGKGHVPLPDFPEKETPEDEYFAEASINS 509 Query: 489 SGSNFVEIRALLNNRSGWPARSSSQMSFYYYVDLSEAAAAGYGPEDITVKAGGYNQGGTV 548 SG+++ EIRA LNNRSGWPA+ + Q+SF YYVDL+EA AGY EDI V A GYN+G +V Sbjct: 510 SGNSYTEIRAQLNNRSGWPAKKTDQLSFRYYVDLTEAVEAGYSAEDIKVTA-GYNEGASV 568 Query: 549 SQLLPFDEANHIYYTKIDFTGTPVYPGGQSAYRKEIQFRISAPLNTAFWDNTNDFSFKGV 608 S+L P D + HIYYT++ F+G +YPGGQSA++KE+QFR+SAP T+FW+ ND S++G+ Sbjct: 569 SELKPHDASKHIYYTEVSFSGVLIYPGGQSAHKKEVQFRLSAPDGTSFWNPENDHSYQGL 628 Query: 609 ASGASSPVKNPYIPVFDAGVKVYGELP 635 + +K YIPV+D G V+G P Sbjct: 629 SHAL---LKTRYIPVYDDGRLVFGHEP 652 >Q6SYB5.1 Q6SYB5_BACLI Cellulase EC=3.2.1.4 Length = 633 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 384/627 (61%), Positives = 474/627 (75%), Gaps = 9/627 (1%) Query: 11 VAKAEGSGYNYAEALQKSIYFYETQRSGELPDNNRVEWRGDSGLQDGADVGHDLTGGWYD 70 A AE +NYAE LQKS+ FYE QRSG LP+N+R+ WRGDSGL+DG DVG DLTGGWYD Sbjct: 12 AASAEEYPHNYAELLQKSLLFYEAQRSGRLPENSRLNWRGDSGLEDGKDVGLDLTGGWYD 71 Query: 71 AGDHVKFGFPMAYTATMLAWSVYEYKEGYVQSGQLDEILDNIRWATDYFMKAHTAPNELW 130 AGDHVKFG PMAY+A +L+WSVYEY++ Y +SGQLD LDNI+WATDYF+KAHTAP ELW Sbjct: 72 AGDHVKFGLPMAYSAAILSWSVYEYRDAYKESGQLDAALDNIKWATDYFLKAHTAPYELW 131 Query: 131 GQVGNGTADHNWWGAAEVMPMARPSYKIDAAHPGSDLXXXXXXXXXXXXIIFRDSDAAYA 190 GQVGNG DH WWG AEVMPM RP+YKIDA PGSDL IIF+ +D++Y+ Sbjct: 132 GQVGNGALDHAWWGPAEVMPMKRPAYKIDAGCPGSDLAGGTAAALASASIIFKPTDSSYS 191 Query: 191 DKLLLHAKQLYNFADTYRGVYSESITDATQYYKSWSGYADELSWGGVWLYMATGDQTYLD 250 +KLL HAKQLY+FAD YRG YS+ ITDA QYY SWSGY DEL+WG VWLY+AT +Q YLD Sbjct: 192 EKLLAHAKQLYDFADRYRGKYSDCITDAQQYYNSWSGYKDELTWGAVWLYLATEEQQYLD 251 Query: 251 KAVTASNSWSTNQSGQWGYQWTQSWDDKHYGAQLLLSRITDDPKFIQSTERNMQFWTTGV 310 KA+ + + W W Y+WT SWDD YGAQLLL+R+T+D +F++S ERN+ +W+TG Sbjct: 252 KALASVSDW--GDPANWPYRWTLSWDDVTYGAQLLLARLTNDSRFVKSVERNLDYWSTGY 309 Query: 311 --NGTTDRVAYTPGGLAHLDQWGALRYAATQAFLAFVYADWVGDPVKQNTARTFAERQIT 368 NG+ +R+ YTPGGLA L+QWG+LRYA+ AFLAFVY+DWV D K R FA RQ Sbjct: 310 SHNGSIERITYTPGGLAWLEQWGSLRYASNAAFLAFVYSDWV-DTEKAKRYRDFAVRQTE 368 Query: 369 YMLGDNPRSSSYVIGFGSNALQHPHHRTSHGSWSDSQTTPANHRHVLYGALVGGPSKTDS 428 YMLGDNP+ S+V+G+G N +HPHHRT+HGSW++ P NHRH LYGALVGGP + DS Sbjct: 369 YMLGDNPQQRSFVVGYGKNPPKHPHHRTAHGSWANQMNVPENHRHTLYGALVGGPGRDDS 428 Query: 429 YTDTISDYVSNEVATDYNSAFTGALAKMMLLHGQGQQPLENFPPAETREDEMFTETSVNA 488 Y D I+DY SNEVA DYN+AFTG +AKM L G+G PL +FP ET EDE F E S+N+ Sbjct: 429 YRDDITDYASNEVAIDYNAAFTGNVAKMFQLFGKGHVPLPDFPEKETPEDEYFAEASINS 488 Query: 489 SGSNFVEIRALLNNRSGWPARSSSQMSFYYYVDLSEAAAAGYGPEDITVKAGGYNQGGTV 548 SG+++ EIRA LNNRSGWPA+ + Q+SF YYVDL+EA AGY EDI V A GYN+G +V Sbjct: 489 SGNSYTEIRAQLNNRSGWPAKKTDQLSFRYYVDLTEAVEAGYSAEDIKVTA-GYNEGASV 547 Query: 549 SQLLPFDEANHIYYTKIDFTGTPVYPGGQSAYRKEIQFRISAPLNTAFWDNTNDFSFKGV 608 S+L P D + HIYYT++ F+G +YPGGQSA++KE+QFR+SAP T+FW+ ND S++G+ Sbjct: 548 SELKPHDASKHIYYTEVSFSGVLIYPGGQSAHKKEVQFRLSAPDGTSFWNPENDHSYQGL 607 Query: 609 ASGASSPVKNPYIPVFDAGVKVYGELP 635 + +K YIPV+D G V+G P Sbjct: 608 SHAL---LKTRYIPVYDDGRLVFGHEP 631 >Q9R9H6.1 Q9R9H6_BACPU Endoglucanase Length = 659 Score = 774 bits (1998), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/622 (59%), Positives = 466/622 (74%), Gaps = 10/622 (1%) Query: 17 SGYNYAEALQKSIYFYETQRSGELPDNNRVEWRGDSGLQDGADVGHDLTGGWYDAGDHVK 76 S YNY E LQKSI FYE QRSG+LP++NR+ WRGDSGL+DG DVGHDLTGGWYDAGDHVK Sbjct: 45 SDYNYVEVLQKSILFYEAQRSGKLPESNRLNWRGDSGLEDGKDVGHDLTGGWYDAGDHVK 104 Query: 77 FGFPMAYTATMLAWSVYEYKEGYVQSGQLDEILDNIRWATDYFMKAHTAPNELWGQVGNG 136 FG PMAY+A +LAW+VYEY+E Y ++ LD++LD I+WATDYF+KAHT PNE W QVG+G Sbjct: 105 FGLPMAYSAAVLAWTVYEYREAYEEAELLDDMLDQIKWATDYFLKAHTGPNEFWAQVGDG 164 Query: 137 TADHNWWGAAEVMPMARPSYKIDAAHPGSDLXXXXXXXXXXXXIIFRDSDAAYADKLLLH 196 ADH WWG AEVMPM RP++KID PG+++ IIF+++DA YA KLL H Sbjct: 165 NADHGWWGPAEVMPMNRPAFKIDEHCPGTEVAAQTAAALAAGSIIFKETDAPYAAKLLTH 224 Query: 197 AKQLYNFADTYRGVYSESITDATQYYKSWSGYADELSWGGVWLYMATGDQTYLDKAVTAS 256 AKQLY FAD YRG Y++ +T+A +Y SWSGY DEL WGG+WLY+AT DQTYL+KA+ A Sbjct: 225 AKQLYAFADQYRGEYTDCVTNAQPFYNSWSGYIDELIWGGIWLYLATNDQTYLNKALKAV 284 Query: 257 NSWSTNQSGQWGYQWTQSWDDKHYGAQLLLSRITDDPKFIQSTERNMQFWTTGV--NGTT 314 W + W Y +T SWD+ + +Q+LL+RIT + +FI+STERN+ +W+TG NG Sbjct: 285 EEWPKD----WDYTFTMSWDNTFFASQILLARITKEKRFIESTERNLDYWSTGFVQNGKV 340 Query: 315 DRVAYTPGGLAHLDQWGALRYAATQAFLAFVYADWVGDPVKQNTARTFAERQITYMLGDN 374 +R+ YTPGGLA LDQWG+LRY A AFLAFVYADWV D K+N +TFA RQ YMLGDN Sbjct: 341 ERITYTPGGLAWLDQWGSLRYTANAAFLAFVYADWVSDQEKKNRYQTFAIRQTHYMLGDN 400 Query: 375 PRSSSYVIGFGSNALQHPHHRTSHGSWSDSQTTPANHRHVLYGALVGGPSKTDSYTDTIS 434 P++ SYV+GFG N HPHHRT+HGSWS+ TTP++HRH LYGALVGGP+ D YTD IS Sbjct: 401 PQNRSYVVGFGKNPPMHPHHRTAHGSWSNQLTTPSSHRHTLYGALVGGPNAQDQYTDDIS 460 Query: 435 DYVSNEVATDYNSAFTGALAKMMLLHGQGQQPLENFPPAETREDEMFTETSVNASGSNFV 494 DYVSNEVATDYN+AFTG +AKM+ L GQGQ L NFPP E EDE F E +V ++ + Sbjct: 461 DYVSNEVATDYNAAFTGNVAKMVQLFGQGQSKLPNFPPKEKVEDEFFVEAAVMSNDTTST 520 Query: 495 EIRALLNNRSGWPARSSSQMSFYYYVDLSEAAAAGYGPEDITVKAGGYNQGGTVSQLLPF 554 +I+A+L NRSGWPARSS +SF YYV+LSE A G+ +DI V A YN+G ++S L + Sbjct: 521 QIKAILYNRSGWPARSSQSLSFRYYVNLSEIFAKGFTDKDIQVTA-VYNEGASLSPLTVY 579 Query: 555 DEANHIYYTKIDFTGTPVYPGGQSAYRKEIQFRISAPLNTAFWDNTNDFSFKGVASGASS 614 D ++HIY+T+IDFTG ++PGG+S ++KEIQFR+SAP WD +ND+SF+G+ S Sbjct: 580 DASSHIYFTEIDFTGVAIFPGGESLHKKEIQFRLSAPNGANIWDASNDYSFQGLTSNMQ- 638 Query: 615 PVKNPYIPVFDAGVKVYGELPS 636 K IPVFD G V+G LP+ Sbjct: 639 --KTARIPVFDQGDLVFGTLPN 658 >A6N866.1 A6N866_BACPU Endoglucanase Length = 659 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/622 (59%), Positives = 465/622 (74%), Gaps = 10/622 (1%) Query: 17 SGYNYAEALQKSIYFYETQRSGELPDNNRVEWRGDSGLQDGADVGHDLTGGWYDAGDHVK 76 S YNY E LQKSI FYE QRSG+LP++NR+ WRGDSGL+DG DVGHDLTGGWYDAGDHVK Sbjct: 45 SDYNYVEVLQKSILFYEAQRSGKLPESNRLNWRGDSGLEDGKDVGHDLTGGWYDAGDHVK 104 Query: 77 FGFPMAYTATMLAWSVYEYKEGYVQSGQLDEILDNIRWATDYFMKAHTAPNELWGQVGNG 136 FG PMAY+A +LAW+VYEY+E Y ++ LD++LD I+WATDYF+KAHT PNE W QVG+G Sbjct: 105 FGLPMAYSAAVLAWTVYEYREAYEEAELLDDMLDQIKWATDYFLKAHTGPNEFWAQVGDG 164 Query: 137 TADHNWWGAAEVMPMARPSYKIDAAHPGSDLXXXXXXXXXXXXIIFRDSDAAYADKLLLH 196 ADH WWG AEVMPM RP++KID PG+++ IIF+++DA YA KLL H Sbjct: 165 NADHGWWGPAEVMPMNRPAFKIDEHCPGTEVAAQTAAALAAGSIIFKETDAPYAAKLLTH 224 Query: 197 AKQLYNFADTYRGVYSESITDATQYYKSWSGYADELSWGGVWLYMATGDQTYLDKAVTAS 256 AKQLY FAD YRG Y++ +T+A +Y SWSGY DEL WGG+WLY+AT DQTYL+KA+ A Sbjct: 225 AKQLYAFADQYRGEYTDCVTNAQPFYNSWSGYIDELIWGGIWLYLATNDQTYLNKALKAV 284 Query: 257 NSWSTNQSGQWGYQWTQSWDDKHYGAQLLLSRITDDPKFIQSTERNMQFWTTGV--NGTT 314 W + W Y +T SWD+ + +Q+LL+RIT + +FI+STERN+ +W+TG NG Sbjct: 285 EEWPKD----WDYTFTMSWDNTFFASQILLARITKEKRFIESTERNLDYWSTGFVQNGKV 340 Query: 315 DRVAYTPGGLAHLDQWGALRYAATQAFLAFVYADWVGDPVKQNTARTFAERQITYMLGDN 374 +R+ YTPGGLA LDQWG+LRY A AFLAFVYADWV D K+N +TFA RQ YMLGDN Sbjct: 341 ERITYTPGGLAWLDQWGSLRYTANAAFLAFVYADWVSDQEKKNRYQTFAIRQTHYMLGDN 400 Query: 375 PRSSSYVIGFGSNALQHPHHRTSHGSWSDSQTTPANHRHVLYGALVGGPSKTDSYTDTIS 434 P++ SYV+GFG N HPHHRT+HGSWS+ TTP++HRH LYGALVGGP+ D YTD IS Sbjct: 401 PQNRSYVVGFGKNPPMHPHHRTAHGSWSNQLTTPSSHRHTLYGALVGGPNAQDQYTDDIS 460 Query: 435 DYVSNEVATDYNSAFTGALAKMMLLHGQGQQPLENFPPAETREDEMFTETSVNASGSNFV 494 DYVSNEVATDYN+AFTG +AKM L GQGQ L NFPP E EDE F E +V ++ + Sbjct: 461 DYVSNEVATDYNAAFTGNVAKMAQLFGQGQSKLPNFPPKEKVEDEFFVEAAVMSNDTTST 520 Query: 495 EIRALLNNRSGWPARSSSQMSFYYYVDLSEAAAAGYGPEDITVKAGGYNQGGTVSQLLPF 554 +I+A+L NRSGWPARSS +SF YYV+LSE A G+ +DI V A YN+G ++S L + Sbjct: 521 QIKAILYNRSGWPARSSQSLSFRYYVNLSEIFAKGFTDKDIQVTA-VYNEGASLSSLTVY 579 Query: 555 DEANHIYYTKIDFTGTPVYPGGQSAYRKEIQFRISAPLNTAFWDNTNDFSFKGVASGASS 614 D ++HIY+T+IDFTG ++PGG+S ++KEIQFR+SAP WD +ND+SF+G+ S Sbjct: 580 DASSHIYFTEIDFTGVAIFPGGESLHKKEIQFRLSAPNGANIWDASNDYSFQGLTSNMQ- 638 Query: 615 PVKNPYIPVFDAGVKVYGELPS 636 K IPVFD G+ +G LP+ Sbjct: 639 --KTARIPVFDQGILAFGTLPN 658 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.131 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,843,146,308 Number of extensions: 263296657 Number of successful extensions: 444169 Number of sequences better than 1.0e-05: 925 Number of HSP's gapped: 440986 Number of HSP's successfully gapped: 1041 Length of query: 890 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 745 Effective length of database: 1,694,649,028 Effective search space: 1262513525860 Effective search space used: 1262513525860 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 136 (57.0 bits)