BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0260.0015.p
         (205 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K9W3.1 B3K9W3_9BACI GCN5-related N-acetyltransferase                 95   3e-18
B1DGP8.1 B1DGP8_9BACL Putative uncharacterized protein                 75   4e-12

>B3K9W3.1 B3K9W3_9BACI GCN5-related N-acetyltransferase
          Length = 369

 Score = 95.1 bits (235), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 109/206 (52%), Gaps = 16/206 (7%)

Query: 3   YDRSLYELATLVRAEAIADIYKLKQKIYVAESDGRLLAYAVIAVRNKLKTEAV-PLVIEW 61
           Y  +  EL  L+ A A +++ +L Q++ VAE DG L A+A+IAV     T +    ++EW
Sbjct: 177 YVTTASELNKLLDASAYSNVIRLNQQVLVAEEDGALTAFAIIAVPGDTMTPSRESTLVEW 236

Query: 62  GGAPEAALQAVSQVIAAKGISELQFQVPWHETGMIRALGSSTYLEE--PNPGTVKIVNPV 119
           GG+PEAA   ++  +A+  +SEL   +PW +  +   + S+  L E   N GT+ +V+  
Sbjct: 237 GGSPEAAALIIADAVASFSLSELTVPLPWQDKELAALIQSAGTLPEYIRNEGTIYLVSGP 296

Query: 120 RLWQQIHPYLQQKSPEALSGVELHSAAPGGETVLTVNGTAVHLSDMELISLFFDTQPQLE 179
           +L +Q+ P L    PE L    + +    G   LT++   + L D  L+S+ FD +    
Sbjct: 297 QLLRQLAPLL----PEGL----IQADGEHGPYRLTLSHETLELDDEGLLSILFDPESPYR 348

Query: 180 LPVAIREQLKELFPVPLPYASGLNFV 205
              ++        PVPLPYA+GL ++
Sbjct: 349 ANGSV-----TFDPVPLPYATGLQYI 369


>B1DGP8.1 B1DGP8_9BACL Putative uncharacterized protein
          Length = 161

 Score = 75.1 bits (183), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 6/158 (3%)

Query: 51  KTEAVPLVIEWGGAPEAALQAVSQVIAAKGISELQFQVPWHETGMIRALGSSTYLEEPNP 110
            T++   V+++ G     ++  +  +   G+  L+  +PWHE  +   L +    EE  P
Sbjct: 7   DTQSNGAVLDYAGDSVQVVRLFADAVNRYGLQSLEIPIPWHEKSIHEGLSAIPSAEEGQP 66

Query: 111 GTVKIVNPVRLWQQIHPYLQQKSPEALSGVELHSAAPGGETVLTVNGT-AVHLSDMELIS 169
           GTV I++   L  Q+ P+L+++  E  +G+ L+    G   +    G  +  LSD ELI 
Sbjct: 67  GTVLILSGEALIDQLSPWLEKQ--ETANGLRLNRQENGSWELSDSTGRPSASLSDEELIR 124

Query: 170 LFFDT--QPQLELPVAIREQLKELFPVPLPYASGLNFV 205
           L FD      ++LP A  +  +ELFPVPLPY +GL FV
Sbjct: 125 LLFDRIGTDAVQLP-AEAQAYQELFPVPLPYTAGLCFV 161


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,209,235,473
Number of extensions: 48259335
Number of successful extensions: 115136
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 115133
Number of HSP's successfully gapped: 2
Length of query: 205
Length of database: 3,060,696,203
Length adjustment: 129
Effective length of query: 76
Effective length of database: 1,845,385,268
Effective search space: 140249280368
Effective search space used: 140249280368
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)