BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0260.0014.p
         (160 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DGP9.1 B1DGP9_9BACL GCN5-related N-acetyltransferase                111   2e-23
B3K9W3.1 B3K9W3_9BACI GCN5-related N-acetyltransferase                107   2e-22
Q186T8.1 Q186T8_CLOD6 Putative acetyltransferase                       65   2e-09
C5CFN0.1 C5CFN0_9THEM GCN5-related N-acetyltransferase                 62   1e-08

>B1DGP9.1 B1DGP9_9BACL GCN5-related N-acetyltransferase
          Length = 218

 Score =  111 bits (277), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 66/127 (51%), Positives = 83/127 (65%), Gaps = 2/127 (1%)

Query: 1   MGDIRFVSREELKQAAELSDLVFRDEEQTSMAVKFPGIFSGSYLS-SPGVFE-DGQLVAF 58
           M  IR ++  E+++A  LSD  FRD  QTSM   FP +FS + L  S G FE DG+LV+F
Sbjct: 1   MVQIRRLTGVEIQEAVRLSDATFRDGNQTSMGQLFPFLFSDAALHLSYGAFEEDGKLVSF 60

Query: 59  AGLVPGFIQMGTVSVPVFSLGSVCTHPEYRGKGYANALLQRVFDHIDRAGASLLLVSGTR 118
            G+V   I++G  ++ V SLGSVCT P  RGKGYA+ LL++V      AGASLLLVSG R
Sbjct: 61  MGVVLWTIRIGEAALRVASLGSVCTEPSARGKGYASRLLEQVQQFTRDAGASLLLVSGDR 120

Query: 119 DLYIRQG 125
            LY R G
Sbjct: 121 SLYTRAG 127


>B3K9W3.1 B3K9W3_9BACI GCN5-related N-acetyltransferase
          Length = 369

 Score =  107 bits (268), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 4/147 (2%)

Query: 4   IRFVSREELKQAAELSDLVF-RDEEQTSMAVKFPGIFSGSYLSSPGVFEDGQLVAFAGLV 62
           I  +  ++L+QA ELSD +F +  EQ SM V FP IFS     S G ++  +LV+F G V
Sbjct: 3   ISMMKSDQLQQAVELSDRIFLKQPEQPSMGVSFPPIFSPGISHSYGAWDQDKLVSFMGFV 62

Query: 63  PGFIQMGTVSVPVFSLGSVCTHPEYRGKGYANALLQRVFDHIDRAGASLLLVSGTRDLYI 122
           P  IQ     + +FS+GSVCT P+YRG+  A  LL++   H + +GASL+L+SG R LY 
Sbjct: 63  PFTIQTRGARLNIFSIGSVCTDPDYRGQRLAGNLLEQCMRHGEASGASLILISGGRSLYT 122

Query: 123 RQGXXXXXXSVRSYLLSPENEVVRKLR 149
           R G      ++R + LSP   VV  LR
Sbjct: 123 RAGSRLFGRALR-FRLSP--AVVEPLR 146


>Q186T8.1 Q186T8_CLOD6 Putative acetyltransferase
          Length = 383

 Score = 65.1 bits (157), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 72/136 (52%), Gaps = 4/136 (2%)

Query: 10  EELKQAAELSDLVFR--DEEQTSMAVKFPGIFSGSYLSSPGVF-EDGQLVAFAGLVPGFI 66
           EE  +  EL + VFR     + +M  +FP + S + + +  +  ED ++V+    +   +
Sbjct: 11  EEFDKVIELINYVFRISRSHKPTMMEEFPLLLSKNNIENMIIISEDDKVVSDVNYLIQDV 70

Query: 67  QMGTVSVPVFSLGSVCTHPEYRGKGYANALLQRVFDHIDRAGASLLLVSGTRDLYIRQGX 126
            +    + V ++G VCTHP+Y  +GY++ +L +V + +   G  ++++SGTR LY R+  
Sbjct: 71  SIQGNRLKVAAIGGVCTHPDYEKRGYSSKILDKVEEKMFYDGVDIVIISGTRSLYSRRN- 129

Query: 127 XXXXXSVRSYLLSPEN 142
                S   Y + PE+
Sbjct: 130 CSLVKSFYKYTIKPED 145


>C5CFN0.1 C5CFN0_9THEM GCN5-related N-acetyltransferase
          Length = 336

 Score = 62.4 bits (150), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 65/122 (53%), Gaps = 2/122 (1%)

Query: 5   RFVSREELKQAAELSDLVFRDEEQTSMAVKFPGIFSGSYLSSPGVFED-GQLVAFAGLVP 63
           R + + E+  A EL+D V    E+    V +P + S     +  VF D G++V+  G++P
Sbjct: 5   RGLRKGEIDSAVELADKVLASGEKRMQKV-YPLLLSEDNAENLRVFVDKGKVVSLVGMLP 63

Query: 64  GFIQMGTVSVPVFSLGSVCTHPEYRGKGYANALLQRVFDHIDRAGASLLLVSGTRDLYIR 123
             + +    V V  +GSV T PEYRGKG+A  LL  V     + G +L  +SG R+LY R
Sbjct: 64  RELNIYGHKVYVGLIGSVSTDPEYRGKGFATKLLHDVELKALKDGIALFYISGGRNLYKR 123

Query: 124 QG 125
            G
Sbjct: 124 FG 125


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.139    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 822,784,805
Number of extensions: 33394275
Number of successful extensions: 70891
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 70928
Number of HSP's successfully gapped: 4
Length of query: 160
Length of database: 3,060,696,203
Length adjustment: 121
Effective length of query: 39
Effective length of database: 1,920,753,388
Effective search space: 74909382132
Effective search space used: 74909382132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)