BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0260.0013.p (451 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3G2C9.1 B3G2C9_PSEAE Tellurium resistance protein 210 2e-52 A1VWN3.1 A1VWN3_POLNA Stress protein 208 8e-52 Q1Q8U0.1 Q1Q8U0_PSYCK Stress protein 200 2e-49 Q2B2E0.1 Q2B2E0_9BACI Putative uncharacterized protein 182 5e-44 C2WDV2.1 C2WDV2_BACCE Putative uncharacterized protein 182 7e-44 >B3G2C9.1 B3G2C9_PSEAE Tellurium resistance protein Length = 419 Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 132/423 (31%), Positives = 207/423 (48%), Gaps = 35/423 (8%) Query: 31 SSPAELDLSCFMVGADGRVPADDYFIFYNQPADPQRAVRFEPIDKYSGEFVIDLRALQSS 90 +SP +DL+CF + G++ D Y IF+NQP P +++ + EF ++L L SS Sbjct: 27 NSPYTVDLACFGLDVAGKLSDDRYMIFFNQPNSPCGSLK-----QAGAEFSLNLAGLPSS 81 Query: 91 GVEKCVFAATLDGPGTFAEVRGCKISAAAGNTELV----FAITEGKAETSLVLAELYRHG 146 +++ VF A +DG G +++ + +V FA E ++++A++YR Sbjct: 82 -IDRLVFTAAIDGVGAMCDIQSSSFTIKDATGMIVATCPFAGNTFATEKAIMVADVYRKD 140 Query: 147 QGFKLRAVGRGFHGGLKPLAEAHXXXXXXXXXXXXXXXXXXXHXXXXXXXXXXXXXXXXX 206 ++L + +GF+ GL L + Sbjct: 141 GQWRLASNLQGFNEGLSALVKHFGGEVADDAPPADPPESAPVQATISLEKKVAAAA---- 196 Query: 207 XXXXXXXXXXXXXPPLKLNLTKIDLHKQQVALSLRKKNIEQEKARVAVVFDASGSMSALY 266 P ++L K K QV SL K + KARVA+V DASGSM++ Y Sbjct: 197 --------------PQLISLAK----KAQV--SLEKAKLTHVKARVALVLDASGSMNSQY 236 Query: 267 QKGVVQRAFERVLAVAASMDDDGMLDVWFFATKSKRMPSVRETGYEDYVKRTYPGPRMFG 326 KG VQ R+L +A DDDG +D W FA + +++ + + +++++ G R + Sbjct: 237 AKGRVQEVVNRLLPLAVHFDDDGSIDCWAFAAQPQKLSEITLSNFQNFINTDNYGWRDWN 296 Query: 327 GLGIGNNEPVVMADILKKYTKEDPGILPVYVVFFSDGGIYETRKISKLLIDSSKHNIFWQ 386 N+EP VM ++K Y D PVYV+F SDGG++E RKI+KL+ D+++ ++WQ Sbjct: 297 VGSRINDEPKVMEQVIKHYL-SDGDRSPVYVLFISDGGVHENRKITKLMTDAAQLPLYWQ 355 Query: 387 FVGLGQADYGVLRELDDLQGRYVDNXXXXXXXXXXXXXXXXXXXRLFNEFPKWLREAREK 446 FVGLG YG+L +LDD++GR VDN +L EFP W+REA K Sbjct: 356 FVGLGGRGYGILEKLDDMKGRVVDNCGFFALDDLHQVTEERLYDQLMEEFPSWIREASAK 415 Query: 447 GVI 449 G+I Sbjct: 416 GII 418 >A1VWN3.1 A1VWN3_POLNA Stress protein Length = 427 Score = 208 bits (530), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 137/448 (30%), Positives = 217/448 (48%), Gaps = 61/448 (13%) Query: 20 SMNARVKISCSSSPAELDLSCFMVGADGRVPADDYFIFYNQPADPQRAVRFEPIDKYSGE 79 + N +I S + +D SCF + A+G++ D+Y IF+NQP + + + Sbjct: 20 NTNHAFQIELSITGISVDFSCFGLNANGKLLRDEYMIFFNQPKTSCGGISLSFTNNLA-M 78 Query: 80 FVIDLRALQSSGVEKCVFAATLDGPGTFAEVRGCKISAAAGNTEL---VFAITEGKAETS 136 F DL L ++ VE F A +D T +++ + N+E+ F ++ E S Sbjct: 79 FACDLNKLPAT-VESLSFTAAIDASQTMNQMQSGYFRFLSNNSEIGRFNFYGSDFNNEKS 137 Query: 137 LVLAELYRH---------GQGFK--LRAVGRGFHG--GLKPLAEAHXXXXXXXXXXXXXX 183 L+L ++YR GQGF L A+ F G + PL + Sbjct: 138 LMLGDIYRKNGEWRFNAFGQGFNGGLSALLEHFGGEEDITPLVSS--------------- 182 Query: 184 XXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLKLNLTKIDLHKQQVALSLRKK 243 P L+L K ++++SL K Sbjct: 183 -----------------VQKVQLSKALSLEKKLEKEAPQLLSLAK------KLSISLEKN 219 Query: 244 NIEQEKARVAVVFDASGSMSALYQKGVVQRAFERVLAVAASMDDDGMLDVWFFATKSKRM 303 ++ A+VA+V DASGSMSA Y+ G +Q +R++ +AA +DDDG LD WF+A+ K+ Sbjct: 220 QLQDVIAKVAIVIDASGSMSASYKNGTIQAVIDRIVLLAARLDDDGNLDTWFYASSHKKY 279 Query: 304 PSVRETGYEDYV-KRTYPG-PRMFGGLGIGNNEPVVMADILKKYTKEDPGILPVYVVFFS 361 + + +DY+ K T G + GLG+GNNEP VM ++L+ Y + LP V+F + Sbjct: 280 LDMTISNVKDYLDKNTESGFLGIIKGLGVGNNEPPVMQEVLETYKNSN---LPALVIFIT 336 Query: 362 DGGIYETRKISKLLIDSSKHNIFWQFVGLGQADYGVLRELDDLQGRYVDNXXXXXXXXXX 421 DGGI + I ++LI++S + IFWQFVG+ + YG+L ELD+++GR +DN Sbjct: 337 DGGIDKASSIKQILIEASNYPIFWQFVGVAGSGYGILEELDNMKGRAIDNAGFFAVDDLK 396 Query: 422 XXXXXXXXXRLFNEFPKWLREAREKGVI 449 RL +EFP WL+EA++KG++ Sbjct: 397 KIKDEELYNRLLSEFPVWLKEAKKKGIL 424 >Q1Q8U0.1 Q1Q8U0_PSYCK Stress protein Length = 431 Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 127/455 (27%), Positives = 210/455 (46%), Gaps = 36/455 (7%) Query: 7 NLVSGSNAKLDEVSMNARVKISCS---SSPAELDLSCFMVGADGRVPADDYFIFYNQPAD 63 +L G + L ++++ I+ SP E+D+SCF + A G++ DDY +FYNQP Sbjct: 3 HLTVGQRSPLSNLAIDDTAPITLKFTRQSPIEMDISCFALDAAGKLINDDYMVFYNQPTS 62 Query: 64 PQRAVRFEPIDK-------YSGEFVIDLRALQSSGVEKCVFAATLDGPGTFAEVRGCKIS 116 P ++ + EF ++L L ++ ++ F + D P + I Sbjct: 63 PCGQIKLTHYESQPTANKGIQAEFEVNLSKL-ATNIDSLFFVLSADTPLNQIQSLEIGIW 121 Query: 117 AAAGNTELVFAITEGKAETSLVLAELYRHGQGFKLRAVGRGFHGGLKPLAEAHXXXXXXX 176 + + + + + + +L +LYR +++ V +GF+GGL + + Sbjct: 122 QQSQKVQAEYQAVDFAQQQASMLMQLYRKSGVWRVSNVAQGFNGGLAAIVQHFGGDVEEG 181 Query: 177 XXXXXXXXXXXXHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLKLNLTKIDLHKQQV 236 P +NL K + Sbjct: 182 SPQAVEATVTPVKAKPSLEKVMLDKA------------------PKLVNLAK------KA 217 Query: 237 ALSLRKKNIEQEKARVAVVFDASGSMSALYQKGVVQRAFERVLAVAASMDDDGMLDVWFF 296 +SL K+ +++ A+VA+V DASGSM+ Y+KG VQ R+L +A S DDD LD W F Sbjct: 218 TISLEKRQLQKLTAKVALVLDASGSMNRQYKKGRVQEVVNRILPLAVSFDDDQALDCWAF 277 Query: 297 ATKSKRMPSVRETGYEDYVKRTYPGPRMFGGLGIGNNEPVVMADILKKYTKEDPGILPVY 356 A + + + + Y+ ++ + G R + NNE VM + Y K+ + PVY Sbjct: 278 ARDPQYLGEIGLSNYDGFINNAHGGWRKWALGPRINNEAEVMKAVTDFYQKDGLDV-PVY 336 Query: 357 VVFFSDGGIYETRKISKLLIDSSKHNIFWQFVGLGQADYGVLRELDDLQGRYVDNXXXXX 416 V+F SDGG+ + R I++++ D++K IFWQFVGLG YG+L++LDD++GR +DN Sbjct: 337 VLFISDGGVNDNRGITRVMTDAAKLPIFWQFVGLGGRGYGILKKLDDMEGRVIDNCDFFE 396 Query: 417 XXXXXXXXXXXXXXRLFNEFPKWLREAREKGVIRS 451 + EFP WL+EAR+ G+I S Sbjct: 397 LDDLDDISEESLYESMLEEFPSWLKEARKIGLITS 431 >Q2B2E0.1 Q2B2E0_9BACI Putative uncharacterized protein Length = 216 Score = 182 bits (462), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 92/218 (42%), Positives = 129/218 (59%), Gaps = 3/218 (1%) Query: 233 KQQVALSLRKKNIEQEKARVAVVFDASGSMSALYQKGVVQRAFERVLAVAASMDDDGMLD 292 K+ + L KK + KARV +V D SGSM LY+ G VQ+ ER+LAVA+ DDDGMLD Sbjct: 2 KKTAGVVLEKKKLSHVKARVGLVLDISGSMRTLYRNGTVQKVVERILAVASQFDDDGMLD 61 Query: 293 VWFFATKSKRMPSVRETGYEDYVKRTYPGPRMFGGLGIGNNEPVVMADILKKYTKEDPGI 352 +W + + R+ V E +E YV + + G N+EP VM D++ KYT EDP Sbjct: 62 IWVYDNEFSRLKPVTERDFEGYVNQYILNNDLIHKFG-RNDEPPVMEDVISKYTLEDPSS 120 Query: 353 LPVYVVFFSDGGIYETRKISKLLIDSSKHNIFWQFVGLGQADYGVLRELDDLQGRYVDNX 412 P ++VF +DGG +T I K ++ S+ IFWQFVG+G A++ VL +LD ++GRY+DN Sbjct: 121 DPAFIVFINDGGCKKT--IKKPIVKSAGKPIFWQFVGIGDANFDVLEKLDTMEGRYIDNA 178 Query: 413 XXXXXXXXXXXXXXXXXXRLFNEFPKWLREAREKGVIR 450 L +EFP W++EAREKGV++ Sbjct: 179 NFYHFKDIEQVSDEELYDHLLDEFPSWIKEAREKGVLK 216 >C2WDV2.1 C2WDV2_BACCE Putative uncharacterized protein Length = 232 Score = 182 bits (461), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 94/227 (41%), Positives = 132/227 (58%), Gaps = 3/227 (1%) Query: 224 LNLTKIDLHKQQVALSLRKKNIEQEKARVAVVFDASGSMSALYQKGVVQRAFERVLAVAA 283 +NL+ I L K+ V + L KK + A+VA+V D SGSM LY G VQ ERVLAVA+ Sbjct: 9 INLSTITLRKEAVRVVLEKKKLTGVVAKVALVLDISGSMRTLYNNGTVQEVVERVLAVAS 68 Query: 284 SMDDDGMLDVWFFATKSKRMPSVRETGYEDYVKRTYPGPRMFGGLGIGNNEPVVMADILK 343 DDDG LD+W + + R+P+V E + +YV++ G N EP VM DI+K Sbjct: 69 QFDDDGSLDIWVYDNEFSRLPAVTEKDFANYVEKHILNNSAIHKFG-RNEEPQVMEDIIK 127 Query: 344 KYTKEDPGILPVYVVFFSDGGIYETRKISKLLIDSSKHNIFWQFVGLGQADYGVLRELDD 403 KYT E+ P +V+F +DGG + I K ++ SS IFWQFVG+G + VLR+LD+ Sbjct: 128 KYTVEEKSEEPAFVIFINDGGC--KKGIQKPVVFSSNQPIFWQFVGIGNGKFDVLRKLDE 185 Query: 404 LQGRYVDNXXXXXXXXXXXXXXXXXXXRLFNEFPKWLREAREKGVIR 450 ++GR++DN L NEFP W++EA+EK ++R Sbjct: 186 MEGRFIDNANFFYIRDIEKTTDETLYNNLLNEFPLWIKEAKEKRILR 232 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,300,635,022 Number of extensions: 92111228 Number of successful extensions: 195969 Number of sequences better than 1.0e-05: 568 Number of HSP's gapped: 195340 Number of HSP's successfully gapped: 595 Length of query: 451 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 312 Effective length of database: 1,751,175,118 Effective search space: 546366636816 Effective search space used: 546366636816 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)