BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0002.p (551 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2BD95.1 Q2BD95_9BACI Putative uncharacterized protein 395 e-108 B9E1U0.1 B9E1U0_CLOK1 Putative uncharacterized protein 389 e-106 A5N8D3.1 A5N8D3_CLOK5 Putative uncharacterized protein 389 e-106 B3KGG0.1 B3KGG0_9BACI Putative uncharacterized protein 366 3e-99 B1HZW8.1 B1HZW8_LYSSC Putative uncharacterized protein 341 1e-91 >Q2BD95.1 Q2BD95_9BACI Putative uncharacterized protein Length = 548 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 218/527 (41%), Positives = 299/527 (56%), Gaps = 5/527 (0%) Query: 1 MNDFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLGTQ-KGSRGTEGSP 59 M DF LK+LDR + F R GVDYK++R ILQVKLTMDGRR PTV + + E S Sbjct: 1 MQDFQTLKILDRFEWMFSRFGVDYKVMRMILQVKLTMDGRRVPTVFAQNARKAEDKEKSN 60 Query: 60 LRVQ--WIYXXXXXXXXXFVVPGSNFMLNMSVLFAVVMFMITTTLISDFSSVMLDLRDKN 117 ++ WIY F++ G N++ MS+ + + F + T +ISDFS+V+LD+RD+N Sbjct: 61 QYIKSLWIYVLFGLFMIPFLLMGENYLFQMSLFYGIFTFFVMTAMISDFSTVLLDIRDRN 120 Query: 118 ILFSKPVDRRTLNMAKSLHVLIYLVTLTLTFTGPSLLVALFKQGVLFFLVYAVEILLMDC 177 ILF KPVDR+T+N AK +HV+IYL LT+ L V LF G LFFL + I+L+D Sbjct: 121 ILFPKPVDRKTINTAKMVHVVIYLSFLTIALATIPLFVGLFNIGPLFFLTAVINIILIDL 180 Query: 178 FXXXXXXXXXXXXXRVFDGEKLKDIINYVQIILSVGIAAGYQLVPRLFDMADLTGSFQPA 237 F R FDGEKLKD+INYVQI LS+ I GYQL+ R F + D T S +P Sbjct: 181 FIVGLTALIYLAFLRFFDGEKLKDLINYVQIGLSLMIMVGYQLLIRSFAIIDFTVSLEPE 240 Query: 238 WWQYVIAPVWFAAPFEVLAGGARGVDLNXXXXXXXXXXXXXXXAYIKLMPLFERSLQKLA 297 WWQ I P+WF A E++ G Y K FE++LQKLA Sbjct: 241 WWQVFIFPMWFGANMELVLNGRFQPFYIIFTALSIVVPFLSIWIYTKFNSSFEQNLQKLA 300 Query: 298 EQGAAGKDKSRYSG-LLSELFCRNKSEAMFFRFTWSMMRKERDFKLKVYPTVGLSLVLPF 356 G+A + K +G L ++ CR+K E FF+F SMM+ ERDFKLKVYP++G S+V+PF Sbjct: 301 YHGSAKEKKRSKTGRFLLKVLCRSKEERAFFKFASSMMKNERDFKLKVYPSLGFSIVVPF 360 Query: 357 IFIFNRAWTSDPSMNTESKXXXXXXXXXXXXXTVVQMLRYSSSYKGAWIYKTIPLPETAP 416 + IF+ ++ +D S SK T++ +L+YS YKG+WI++ PL + P Sbjct: 361 LMIFS-SFDTDLSRLEGSKSYLSIYFSMIIIPTIMLLLKYSGKYKGSWIFRAAPLDQLGP 419 Query: 417 VYRGMXXXXXXXXXXXXXXXESAVFLWLFGAHILPGLAAVMLALPLYAVICFRVLPRALP 476 ++ G S +F+ LFGA ++P L V + YAV+CF L A+P Sbjct: 420 MFSGTIKAFILKLYLPIYSILSVLFVLLFGARVVPDLVVVFINACTYAVLCFMFLKTAIP 479 Query: 477 FSEKYEAAKQRDFSVSGFVLLFILMGLAGLHYIVSLLPSGIYIYLVI 523 FSE ++ Q V F L+ AGLHY+ +LLP GIY+Y+ + Sbjct: 480 FSESFDQYNQNGNGVIIFGLMLFAGLFAGLHYLSTLLPYGIYLYMAV 526 >B9E1U0.1 B9E1U0_CLOK1 Putative uncharacterized protein Length = 541 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 212/518 (40%), Positives = 301/518 (58%), Gaps = 3/518 (0%) Query: 1 MNDFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLGTQKGSRGTEGSPL 60 M DF VLK LD+ QG F + G+DY ++R ILQ+K+ MDGRR PT+L + + L Sbjct: 1 MKDFRVLKFLDKFQGVFEKYGIDYIVMRRILQMKILMDGRRVPTILKNSSKKKSENENNL 60 Query: 61 RVQWI-YXXXXXXXXXFVVPGSNFMLNMSVLFAVVMFMITTTLISDFSSVMLDLRDKNIL 119 + + Y FVV NFM MS +F ++MFM+ T+LISDFSSV+LD+RDKNI+ Sbjct: 61 KKSLLFYVIIGIIMVPFVVMDKNFMFQMSFVFGILMFMLMTSLISDFSSVLLDIRDKNII 120 Query: 120 FSKPVDRRTLNMAKSLHVLIYLVTLTLTFTGPSLLVALFKQGVLFFLVYAVEILLMDCFX 179 SKPV +TL+ AK +HV IY+ +T++ G +L AL KQG LFFL++ +EI+L + F Sbjct: 121 SSKPVHNKTLSTAKIIHVCIYMFLITISICGTALAAALIKQGFLFFLIFFLEIILSNLFI 180 Query: 180 XXXXXXXXXXXXRVFDGEKLKDIINYVQIILSVGIAAGYQLVPRLFDMADLTGSFQPAWW 239 + FDGEKLKDIINYVQIILS+ I GYQ + RLF++ DL P WW Sbjct: 181 VIITALLYLVILKFFDGEKLKDIINYVQIILSITITLGYQFIGRLFNIVDLKPILTPKWW 240 Query: 240 QYVIAPVWFAAPFEVLAGGARGVDLNXXXXXXXXXXXXXXXAYIKLMPLFERSLQKLAEQ 299 QY + PVWF+APFE++ Y+K +P FE +LQKL Sbjct: 241 QYFLPPVWFSAPFELILKHNYSHFTVIFSALALIVPIISIVIYVKFIPTFEENLQKLNNN 300 Query: 300 GAAGKD-KSRYSGLLSELFCRNKSEAMFFRFTWSMMRKERDFKLKVYPTVGLSLVLPFIF 358 GK K + + LS + C N+ E +FF+F MM+ ER+FKLKVYP++G SL+ PFIF Sbjct: 301 SVRGKKAKGKLAVALSSIICSNREEKIFFKFASYMMKNEREFKLKVYPSLGFSLIFPFIF 360 Query: 359 IFNRAWTSDPSMNTESKXXXXXXXXXXXXXTVVQMLRYSSSYKGAWIYKTIPLPETAPVY 418 IFN S SK +VV M++YS +Y+GAWIYK +P+ TA ++ Sbjct: 361 IFNSIGYESLSNIASSKMYLNLYFCTLILPSVVMMMKYSVNYRGAWIYKAMPIKNTASIF 420 Query: 419 RGMXXXXXXXXXXXXXXXESAVFLWLFGAHILPGLAAVMLALPLYAVICFRVLPRALPFS 478 +G E +F+++FG I+P + + + L+ VICF+++ ++LPFS Sbjct: 421 KGTLKALIVKLMLPVYVLEFILFVFIFGIRIIPDIFVLFFNILLFTVICFKLMKKSLPFS 480 Query: 479 EKYEAAKQRDFSVSGFVLLFILMGLAGLHYIVSLLPSG 516 EK + + Q + + VL+ +L LAG+HY + + G Sbjct: 481 EKLQTSAQGE-GLILIVLMILLGVLAGIHYFCTFISYG 517 >A5N8D3.1 A5N8D3_CLOK5 Putative uncharacterized protein Length = 541 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 212/518 (40%), Positives = 301/518 (58%), Gaps = 3/518 (0%) Query: 1 MNDFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLGTQKGSRGTEGSPL 60 M DF VLK LD+ QG F + G+DY ++R ILQ+K+ MDGRR PT+L + + L Sbjct: 1 MKDFRVLKFLDKFQGVFEKYGIDYIVMRRILQMKILMDGRRVPTILKNSSKKKSENENNL 60 Query: 61 RVQWI-YXXXXXXXXXFVVPGSNFMLNMSVLFAVVMFMITTTLISDFSSVMLDLRDKNIL 119 + + Y FVV NFM MS +F ++MFM+ T+LISDFSSV+LD+RDKNI+ Sbjct: 61 KKSLLFYVIIGIIMVPFVVMDKNFMFQMSFVFGILMFMLMTSLISDFSSVLLDIRDKNII 120 Query: 120 FSKPVDRRTLNMAKSLHVLIYLVTLTLTFTGPSLLVALFKQGVLFFLVYAVEILLMDCFX 179 SKPV +TL+ AK +HV IY+ +T++ G +L AL KQG LFFL++ +EI+L + F Sbjct: 121 SSKPVHNKTLSTAKIIHVCIYMFLITISICGTALAAALIKQGFLFFLIFFLEIILSNLFI 180 Query: 180 XXXXXXXXXXXXRVFDGEKLKDIINYVQIILSVGIAAGYQLVPRLFDMADLTGSFQPAWW 239 + FDGEKLKDIINYVQIILS+ I GYQ + RLF++ DL P WW Sbjct: 181 VIITALLYLVILKFFDGEKLKDIINYVQIILSITITLGYQFIGRLFNIVDLKPILTPKWW 240 Query: 240 QYVIAPVWFAAPFEVLAGGARGVDLNXXXXXXXXXXXXXXXAYIKLMPLFERSLQKLAEQ 299 QY + PVWF+APFE++ Y+K +P FE +LQKL Sbjct: 241 QYFLPPVWFSAPFELILKHNYSHFTVIFSALALIVPIISIVIYVKFIPTFEENLQKLNNN 300 Query: 300 GAAGKD-KSRYSGLLSELFCRNKSEAMFFRFTWSMMRKERDFKLKVYPTVGLSLVLPFIF 358 GK K + + LS + C N+ E +FF+F MM+ ER+FKLKVYP++G SL+ PFIF Sbjct: 301 SVRGKKAKGKLAVALSSIICSNREEKIFFKFASYMMKNEREFKLKVYPSLGFSLIFPFIF 360 Query: 359 IFNRAWTSDPSMNTESKXXXXXXXXXXXXXTVVQMLRYSSSYKGAWIYKTIPLPETAPVY 418 IFN S SK +VV M++YS +Y+GAWIYK +P+ TA ++ Sbjct: 361 IFNSIGYESLSNIASSKMYLNLYFCTLILPSVVMMMKYSVNYRGAWIYKAMPIKNTASIF 420 Query: 419 RGMXXXXXXXXXXXXXXXESAVFLWLFGAHILPGLAAVMLALPLYAVICFRVLPRALPFS 478 +G E +F+++FG I+P + + + L+ VICF+++ ++LPFS Sbjct: 421 KGTLKALIVKLMLPVYVLEFILFVFIFGIRIIPDIFVLFFNILLFTVICFKLMKKSLPFS 480 Query: 479 EKYEAAKQRDFSVSGFVLLFILMGLAGLHYIVSLLPSG 516 EK + + Q + + VL+ +L LAG+HY + + G Sbjct: 481 EKLQTSAQGE-GLILIVLMILLGVLAGIHYFCTFISYG 517 >B3KGG0.1 B3KGG0_9BACI Putative uncharacterized protein Length = 543 Score = 366 bits (940), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 208/528 (39%), Positives = 300/528 (56%), Gaps = 10/528 (1%) Query: 3 DFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLGTQKGSRGTEGSPLRV 62 F +LKLLDR QG R GVDY+ LR IL VKL MD RR P +L + + L V Sbjct: 7 SFRMLKLLDRFQGVISRLGVDYETLRRILHVKLLMDSRRAPVILSSNSRKAEEQDKNLFV 66 Query: 63 Q--WIYXXXXXXXXXFVV-PGSNFMLNMSVLFAVVMFMITTTLISDFSSVMLDLRDKNIL 119 W+Y FV +++ MS+L A++MF+I T++ISDFSSV+LD+RD++IL Sbjct: 67 SSLWLYGLIGLVLTPFVFWSDPEYLMPMSILSAILMFLIMTSMISDFSSVLLDVRDRSIL 126 Query: 120 FSKPVDRRTLNMAKSLHVLIYLVTLTLTFTGPSLLVALFKQGVLFFLVYAVEILLMDCFX 179 +KP+D RT+ +A+S+H IYL+ LT + SL V LFK GVLFFL+ +E++LM+ Sbjct: 127 MTKPIDGRTVGVARSIHAGIYLLLLTGALSAASLAVGLFKHGVLFFLICILELILMNMLI 186 Query: 180 XXXXXXXXXXXXRVFDGEKLKDIINYVQIILSVGIAAGYQLVPRLFDMADLTGSFQPAWW 239 + +DGEKLKD+INYVQI LS +A GYQ V R FD+ D F PAWW Sbjct: 187 LVSTSMIYLVLLKYWDGEKLKDLINYVQIGLSATLAIGYQFVIRSFDLIDFNLVFTPAWW 246 Query: 240 QYVIAPVWFAAPFEVLAGGARGVDLNXXXXXXXXXXXXXXXAYIKLMPLFERSLQKLAEQ 299 Q ++ PVWFAAPFE + G G L Y++ +P FE+ L+KLA Sbjct: 247 QVLLPPVWFAAPFEWMFGEGSGW-LIVLSLLAVFVPVLLMVVYLRYIPSFEQYLEKLAHS 305 Query: 300 GAA-GKDKSRYSGLLSELFCRNKSEAMFFRFTWSMMRKERDFKLKVYPTVGLSLVLPFIF 358 A G+++ R+ L+++ CR+++E FR + SM++ ER+FKLKVYPT+GLS++LP++F Sbjct: 306 EAGKGRERGRFDRFLAKIVCRSRTEQACFRLSASMLKNEREFKLKVYPTLGLSVLLPYLF 365 Query: 359 IFNRAWTSDPSMNTESKXXXXXXXXXXXXXTVVQMLRYSSSYKGAWIYKTIPLPETAPVY 418 F+ S + TVV ML++S K W++ PLP +P+Y Sbjct: 366 FFSTIRNSSLAEIGRGSSYYVLHVMLIMIVTVVMMLKFSGKPKAFWLFGAAPLPNMSPLY 425 Query: 419 RGMXXXXXXXXXXXXXXXESAVFLWLFGAHILPGLAAVMLALPLYAVICFRVLPRALPFS 478 +G + VFL +FG ILP + ++L + + + + R PFS Sbjct: 426 QGALKAFAIKMFLPLFTVNAIVFLIIFGIRILPDVLIILLTGLVLIPVSAKAMLRHPPFS 485 Query: 479 EKYEAAKQRDFSVSGFVLLFILM--GLAGLHYIVSLLPSGIYIYLVIL 524 + + A+Q+D +VLLFI++ GL GLHY S + GI Y+V+L Sbjct: 486 QAFNVAQQKD---GWWVLLFIIVVGGLCGLHYFSSTVTYGISAYIVVL 530 >B1HZW8.1 B1HZW8_LYSSC Putative uncharacterized protein Length = 537 Score = 341 bits (874), Expect = 1e-91, Method: Compositional matrix adjust. Identities = 207/527 (39%), Positives = 293/527 (55%), Gaps = 6/527 (1%) Query: 1 MNDFWVLKLLDRLQGGFRRAGVDYKMLRSILQVKLTMDGRRTPTVLGTQKGSRGTEGSPL 60 M DF L+LLD + F + G+DY ++R IL +KLTMD R+ PT+ K + + Sbjct: 1 MTDFKTLQLLDLFRWLFVKMGIDYDLMRKILHIKLTMDERKVPTLFNQNKKKDNQKYGYI 60 Query: 61 RVQWIYXXXXXXXXXFVVPGSNFMLNMSVLFAVVMFMITTTLISDFSSVMLDLRDKNILF 120 + WIY + G NF+ MS+ FA+++F+I T+LISDFSSV+LD+RDK+IL Sbjct: 61 KSLWIYVLFGLILIPLMGFGQNFLFQMSIAFAMIIFLIMTSLISDFSSVLLDVRDKSILS 120 Query: 121 SKPVDRRTLNMAKSLHVLIYLVTLTLTFTGPSLLVALFKQGVLFFLVYAVEILLMDCFXX 180 +KP+ RT+N AK +H+ IYL LT+ TG LLV+LF QG++FFL+ +EI+L++ F Sbjct: 121 TKPISARTINAAKFMHIFIYLFYLTIALTGIPLLVSLFTQGIVFFLLTVLEIILINLFIV 180 Query: 181 XXXXXXXXXXXRVFDGEKLKDIINYVQIILSVGIAAGYQLVPRLFDMADLTGSFQPAWWQ 240 R FDGEKLKD+INYVQI LS+ + GYQ++ R F+ DL + WW Sbjct: 181 AITAILYIAILRFFDGEKLKDMINYVQIALSLMLMIGYQVLIRSFEFVDLDMTVSFHWWS 240 Query: 241 YVIAPVWFAAPFEVLAGGARGVDLNXXXXXXXXXXXXXXXAYIKLMPLFERSLQKLAEQG 300 + P+WFAAPF++L G + YIKL+P FER+LQKL Sbjct: 241 LFLIPMWFAAPFDLLLNGDTSLLTILYSIFAVIIPILSIGLYIKLIPTFERNLQKLLSTS 300 Query: 301 AAGKDK-SRYSGLLSELFCRNKSEAMFFRFTWSMMRKERDFKLKVYPTVGLSLVLPFIFI 359 + K+K +R L + CR E FFRF MM++ER+FKLKVYP++G S ++PFIFI Sbjct: 301 KSKKEKHNRLKTYLLAMLCRTHEERAFFRFASLMMKQEREFKLKVYPSLGFSFIIPFIFI 360 Query: 360 FNRAWTSDPSMNTESKXXXXXXXXXXXXXTVVQMLRYSSSYKGAWIYKTIPLPETAPVYR 419 F + + T S V +L +S+ YK AWIYK +PL + + + Sbjct: 361 FTFSRSEKIDYAT-SMSYLNIYFSMMIIPAAVLLLGHSAKYKAAWIYKILPLKDYTNLQK 419 Query: 420 GMXXXXXXXXXXXXXXXESAVFLWLFGAHILPGLAAVMLALPLYAVICFRVLPRALPFSE 479 G S VF +++G I+P L V++ LY + CF ++ +PF++ Sbjct: 420 GSLKAFLIKLYVPLFLVLSLVFSYIYGIRIIPDLLVVLVTSWLYTLFCFLMMSNKIPFTK 479 Query: 480 KYEAAKQRDFSVSGFVLLFI-LMGLAGLHY-IVSLLPSGIYIYLVIL 524 Y+ D VLLFI L LAGLHY IVS G IY ++L Sbjct: 480 PYDEVG--DAQGWKTVLLFIPLAMLAGLHYLIVSQAAFGPTIYFIVL 524 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.328 0.142 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,695,514,252 Number of extensions: 92738078 Number of successful extensions: 259157 Number of sequences better than 1.0e-05: 41 Number of HSP's gapped: 258948 Number of HSP's successfully gapped: 42 Length of query: 551 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 410 Effective length of database: 1,732,333,088 Effective search space: 710256566080 Effective search space used: 710256566080 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 134 (56.2 bits)