BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0258.0001.p (669 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9R8.1 B1D9R8_9BACL Diguanylate cyclase/phosphodiesterase 523 e-146 B3K3R9.1 B3K3R9_9BACI Diguanylate cyclase 521 e-146 A8VSW6.1 A8VSW6_9BACI Coenzyme A transferase 420 e-115 A0KCT6.1 A0KCT6_BURCH Diguanylate cyclase/phosphodiesterase 407 e-111 Q1LEV1.1 Q1LEV1_RALME Diguanylate cyclase/phosphodiesterase 402 e-110 >B1D9R8.1 B1D9R8_9BACL Diguanylate cyclase/phosphodiesterase Length = 683 Score = 523 bits (1347), Expect = e-146, Method: Compositional matrix adjust. Identities = 278/667 (41%), Positives = 397/667 (59%), Gaps = 16/667 (2%) Query: 7 HYNLWIVXXXXXXXXXXXXXXXXXILQVFHSAGRVRRLWLLSSACVLGSGIWAMHFVGVM 66 YN W++ + ++ S G+V+ W+L+ A V+GSG+W MHF+G+M Sbjct: 7 EYNGWVILLSFIIALFVSYSALNLVYKISQSKGKVQLGWMLAGAFVMGSGVWTMHFIGMM 66 Query: 67 ASYLPFKVSYHPGIAGCSLLISMCACYLSLWVATMSPLRTGRXXXXXXXXXXXXXXXHYM 126 A ++ +SY+ I S+ S+CA Y++ ++ + + HY Sbjct: 67 AFHIGIPISYNVPITLLSITASICASYVAFYLTLAKEINRLKLLGGGFIMGAGIVAMHYT 126 Query: 127 GMYSM-KLQAEIHYETLTQGLXXXXXXXXXXXXXFLFHKFKD--YAGFSRWKLYSAVFIG 183 GM SM I Y + L + F F+D A +S+W +A +G Sbjct: 127 GMASMHSPTMSIQYNPIIVVLSAVIAILASCAALYFFINFRDGSKAVWSKWA--AASLMG 184 Query: 184 LAVTGMHYISLRASILEVDNWTGTRPLL------IESDXXXXXXXXXXXXFMLAVSCGAV 237 LAV GMHY + A+ W G P+ I + ++ V+ A+ Sbjct: 185 LAVCGMHYTGMGAASF----WCG-EPIASSLTENIPINLFLLISVTLVTLLIMLVTWIAI 239 Query: 238 FLDRHVLERMAYHDPLTELPNRHGLERYFKGEFFGGHSGAVFFVDLDRFKSINDTLGHDI 297 +LDR VLERMAY DPLT L NRH + RYF + S + F+DLD+FK INDTLGHDI Sbjct: 240 YLDRTVLERMAYSDPLTGLANRHAMNRYFDQKLDKARSYGLLFLDLDQFKIINDTLGHDI 299 Query: 298 GDMLLQEVAGRLRGVISAKGKVFRLGGDEFLIALPVCTMEDAREEAQHILRELKKAYSIE 357 GD+L+Q VA RLR +S + FRLGGDEFL+ + + A IL +++K Y +E Sbjct: 300 GDLLVQAVAKRLRSHVSEGAQTFRLGGDEFLLVTRGMEPSEVEKLANRILEDIRKPYLLE 359 Query: 358 GNELYVTASVGISMTPLHGTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLRRMS 417 GNELY+T S+GIS++P HG +RS+L+ AADTA+Y +K GKN++ ++D++M R LRRM Sbjct: 360 GNELYITGSIGISLSPQHGIERSSLLIAADTAMYQAKRRGKNQYCLYDEQMERELLRRME 419 Query: 418 LEKDLRKALARSEFMVVYQPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGL 477 LEKDLR AL R +F+V YQPKWD+ N +G+EALLRW HP G I P EFIPIAEETGL Sbjct: 420 LEKDLRLALPREQFVVHYQPKWDAAANRAIGVEALLRWNHPLLGRIPPEEFIPIAEETGL 479 Query: 478 IVPITYWMLHDVCGQNKLWHKACVANVAVSINMSARMFEGGSLYDVVEEALVRSGLEPHF 537 IVPIT W+L C W++ ++VS+NMS +F+ +L D+V AL+ SGL+ H Sbjct: 480 IVPITRWVLGQACRDCFEWNEGRAEPLSVSVNMSVSVFDSKNLEDMVISALLHSGLDAHL 539 Query: 538 LELEITESIAMNNMEETVAQLSKLRNLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVF 597 LELEITE+I M+N+E+ + QL+ +R +GV++S+DDFG G+S+LG++D IP TLKID+++ Sbjct: 540 LELEITETIVMHNVEDVIEQLNPIREMGVQISMDDFGAGYSALGSIDLIPFQTLKIDKLY 599 Query: 598 IRKSKMHXXXXXXXXXXXXXXXLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPV 657 +++S LN+EV+AEGVET +QI LQS GC +MQG+Y+ +PM Sbjct: 600 MQQSDSPSKRAIIQTIIILAKQLNLEVIAEGVETEQQIAFLQSAGCSMMQGYYFSKPMSR 659 Query: 658 SELGQWF 664 ++L W Sbjct: 660 ADLDLWL 666 >B3K3R9.1 B3K3R9_9BACI Diguanylate cyclase Length = 672 Score = 521 bits (1342), Expect = e-146, Method: Compositional matrix adjust. Identities = 266/662 (40%), Positives = 396/662 (59%), Gaps = 5/662 (0%) Query: 7 HYNLWIVXXXXXXXXXXXXXXXXXILQVFHSAGRVRRLWLLSSACVLGSGIWAMHFVGVM 66 +YNL+IV ++ + G+ + WL A V+GSGIW+MHFVG++ Sbjct: 4 NYNLYIVGLSIAIAILASYSALNITSKISDANGKSKFFWLFGGAMVMGSGIWSMHFVGML 63 Query: 67 ASYLPFKVSYHPGIAGCSLLISMCACYLSLWVATMSPLRTGRXXXXXXXXXXXXXXXHYM 126 A ++ V Y + S+L S+ + +++ ++ + + HYM Sbjct: 64 AMHMNMNVKYDAFLTIMSMLASVISSFIAFYITMPKDINWSKIAIGGFVMGSGIVTMHYM 123 Query: 127 GMYSMKLQAEIHYETLTQGLXXXXXXXXXXXXXFLFHKFKDYAGFSRWKLYSAVFIGLAV 186 GM +M + A+I Y+ + L LF +F+ ++ S K SAV +G AV Sbjct: 124 GMEAMVVHADIRYDPVFWILSVVIALAASYAALLLFLRFRSHSKSSFLKWGSAVVMGFAV 183 Query: 187 TGMHYISLRASILEVDNWTGT-RPLLIESDXXXXXXXXXXXXFMLAVSCGAVFLDRHVLE 245 GMHY ++A+ E T +P + D +L +S GA+F DRHVLE Sbjct: 184 CGMHYTGMKAARFEAHAGMMTHQPQSV--DFFLLYCVTVAIFAILLISWGAMFFDRHVLE 241 Query: 246 RMAYHDPLTELPNRHGLERYFKGEFFGGHSGAVFFVDLDRFKSINDTLGHDIGDMLLQEV 305 ++AY D +T LPNR+ + R+F+ + F+DLD+FK+INDTLGH++GD+L+ EV Sbjct: 242 KLAYQDTITGLPNRNEMNRFFRTNA-ETDKITILFLDLDQFKAINDTLGHNVGDLLVHEV 300 Query: 306 AGRLRGVISAKGKVFRLGGDEFLIALPVCTMEDAREEAQHILRELKKAYSIEGNELYVTA 365 RLR I + +VFR+GGDEFL+ L A+ A IL+++KK Y I+GNELYVT Sbjct: 301 GKRLRQFIRSGQQVFRIGGDEFLVILKQSDPNYAQRLADDILQQIKKVYHIDGNELYVTV 360 Query: 366 SVGISMTPLHGTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLRRMSLEKDLRKA 425 S+GIS+ +H +DR+ L+K ADTA+Y +K GKN+ ++D+EM ++R+M LEKDL++A Sbjct: 361 SIGISIGSVHSSDRTTLLKNADTAMYKAKGLGKNQQCLYDEEMGLQEVRKMELEKDLQRA 420 Query: 426 LARSEFMVVYQPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGLIVPITYWM 485 L EF +VYQPKW+ + VG EALLRW+HP G+ISP EFIPIAEETGLI+P+T W Sbjct: 421 LEMKEFFIVYQPKWNVQSDRLVGFEALLRWKHPRLGVISPQEFIPIAEETGLIIPMTRWT 480 Query: 486 LHDVCGQNKLWHKACVANVAVSINMSARMFEGGSLYDVVEEALVRSGLEPHFLELEITES 545 L + C Q ++W + V VS+N+S R+F G +L ++++ L ++ LEP LELEITES Sbjct: 481 LEEACKQCRVWQDSGVVQ-PVSVNLSVRLFHGDNLLELIQNVLRKADLEPRLLELEITES 539 Query: 546 IAMNNMEETVAQLSKLRNLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVFIRKSKMHX 605 + ++++ + + QL +R+LGV+VS+DDFGTG+SS+G LD IP++ LK+D+ F Sbjct: 540 MVLHDVNDIIRQLGSIRSLGVKVSMDDFGTGYSSIGLLDRIPIDALKLDRQFTNDLDTPS 599 Query: 606 XXXXXXXXXXXXXXLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPVSELGQWFI 665 LN++V+AEGVE E I+ L LGC VMQG+YYG+PM + E+ W Sbjct: 600 KRAIVNAVVLMAEKLNLDVIAEGVENKEHIDFLTGLGCHVMQGYYYGKPMDIHEIEVWMY 659 Query: 666 EN 667 + Sbjct: 660 DQ 661 >A8VSW6.1 A8VSW6_9BACI Coenzyme A transferase Length = 664 Score = 420 bits (1080), Expect = e-115, Method: Compositional matrix adjust. Identities = 228/666 (34%), Positives = 353/666 (53%), Gaps = 3/666 (0%) Query: 4 MGIHYNLWIVXXXXXXXXXXXXXXXXXILQVFHSAGRVRRLWLLSSACVLGSGIWAMHFV 63 M I YN ++V ++ + G+ + WLLS + V+G+G+W+MHF+ Sbjct: 1 MSISYNPFVVILSVIIAILASYIALVFAGKISQAEGKAKAYWLLSGSFVMGAGVWSMHFI 60 Query: 64 GVMASYLPFKVSYHPGIAGCSLLISMCACYLSLWVATMSPLRTGRXXXXXXXXXXXXXXX 123 G++A P V+Y I S + S+ A ++ V + R Sbjct: 61 GMIAMQTPLPVTYDVTITLVSFVASLFASLIAFLVTMPLNISPSRVAVGGFIMGTGIIAM 120 Query: 124 HYMGMYSMKLQAEIHYETLTQGLXXXXXXXXXXXXXFLFHKFKDYAGFSRWKLYSAVFIG 183 HY GM +M L A + Y+ + LF +F+D +K SAV +G Sbjct: 121 HYTGMAAMNLNASMSYDNTLVMISVIIAYGASVAALILFIRFRDRKRAHLYKWISAVVMG 180 Query: 184 LAVTGMHYISLRASILEVDNWTGTRPLLIESDXXXXXXXXXXXXFMLAVSCGAVFLDRHV 243 +A++GMHY + A L++ + P + + VS G + DR V Sbjct: 181 IAISGMHYTGMAAMELDMGSGHLHNPEAFTMNPFLLFGVTAMIVLIFIVSWGTMIFDRKV 240 Query: 244 LERMAYHDPLTELPNRHGLERYFKGEFFGGHSGAVFFVDLDRFKSINDTLGHDIGDMLLQ 303 L RMAY+D +T LPNR+ + RY + G + +V F DLD FK++NDTLGH GD LL Sbjct: 241 LSRMAYYDGVTGLPNRNAMNRYMNTD--GQENLSVLFFDLDAFKTVNDTLGHHQGDRLLH 298 Query: 304 EVAGRLRGVISAKGKVFRLGGDEFLIALPVCTMEDAREEAQHILRELKKAYSIEGNELYV 363 V LR A +VFR+GGDEFL + + + E A +L +L Y I+ E+YV Sbjct: 299 HVGRILRPFTDADIRVFRIGGDEFLFTIKNRSRGETLELADKLLFKLGHPYLIDQREIYV 358 Query: 364 TASVGISMTPLHGTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLRRMSLEKDLR 423 TAS+G+S++ + ++ AD A+Y +K+SGKN V+ +EM ++RRM+LEKDL Sbjct: 359 TASIGVSLSGEGASGGLEKLREADIAMYRAKESGKNTVKVYTKEMGEARMRRMTLEKDLT 418 Query: 424 KALARSEFMVVYQPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGLIVPITY 483 KA+ +VYQPK+DSL + +G EAL RW HPE G I P EFIPIAEE+ +I+ T Sbjct: 419 KAVKEERLYMVYQPKFDSLKQIIIGAEALTRWYHPELGFIPPDEFIPIAEESDVIIAFTD 478 Query: 484 WMLHDVCGQNKLWHKACVANVAVSINMSARMFEGGSLYDVVEEALVRSGLEPHFLELEIT 543 W + C Q W + + V++N+S + E ++ +++E A+ L P +E+E+T Sbjct: 479 WSIQAACRQTAAWSIQGL-TLPVAVNVSVKAIELTNVKEMIERAIRVHKLNPALIEMEVT 537 Query: 544 ESIAMNNMEETVAQLSKLRNLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVFIRKSKM 603 ES+ + ++ + Q+ ++R LGV VS+DDFGTG+SS+ L+++P +TLK+D+ FI+ Sbjct: 538 ESVIHSEQDQILEQIKQIRELGVSVSMDDFGTGYSSISVLNKLPFDTLKLDKSFIKDIHD 597 Query: 604 HXXXXXXXXXXXXXXXLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPVSELGQW 663 L++ V+ EGVET + ++Q LG +MQG+YY +P+ EL + Sbjct: 598 GKKQAIIEGIFMIASKLDLAVITEGVETRDDERIIQKLGGHLMQGYYYSKPVAAEELTEL 657 Query: 664 FIENTA 669 A Sbjct: 658 LKRKAA 663 >A0KCT6.1 A0KCT6_BURCH Diguanylate cyclase/phosphodiesterase Length = 693 Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust. Identities = 243/668 (36%), Positives = 354/668 (52%), Gaps = 35/668 (5%) Query: 34 VFHSAGRVR-------RLWLLSSACVLGSGIWAMHFVGVMASYLPFKVSYHPGIAGCSLL 86 V AGR++ R WL+ ACV+G+GIW+MHFVG++A LP + Y P I SLL Sbjct: 25 VLDMAGRIKSAQGHAARWWLVGGACVMGTGIWSMHFVGMLAFALPIPLGYDPAITLLSLL 84 Query: 87 ISMCACYLSLWVATMSPLRTGRXXXXXXXXXXXXXXXHYMGMYSMKLQAEIHYETLTQGL 146 I++ +LW+ L+ R HY GM SM++ I Y+ L L Sbjct: 85 IAIVCSTCALWLVCRDTLKWRRLCGGAMLMGAGVAGMHYTGMASMRMSPGIQYDPLLVCL 144 Query: 147 XXXXXXXXXXXXXFLFHKFKDYAGFSRWKLY---SAVFIGLAVTGMHYISLRASILEVDN 203 ++ F A SR +L SAV +G A+ GMHY + A+ + + Sbjct: 145 SVAIAVVASGAVLWIV--FIRRANSSRVRLLNLGSAVLMGAAIAGMHYTGMAAARFPLGS 202 Query: 204 WTGTRPLLIESDXXXXXXXXXXXXFMLAVSCGAVFLDRHVLER----------------- 246 G +++ +LA++ LD + R Sbjct: 203 LCGAAGSRMDAGWLALVIIVATLA-ILAIALIVSILDLRLEARTAVLATSLAEANQELTY 261 Query: 247 MAYHDPLTELPNRHGLERYFKGEFFGGH----SGAVFFVDLDRFKSINDTLGHDIGDMLL 302 +A HD LT+LPNR LE S A+ F+DLD FK++ND GH +GD+LL Sbjct: 262 LALHDNLTKLPNRVLLEDRIDQAIQAADREHGSFALMFMDLDGFKAVNDAYGHHVGDLLL 321 Query: 303 QEVAGRLRGVISAKGKVFRLGGDEFLIALPVCTMEDAREEAQHILRELKKAYSIEGNELY 362 +VA R+ + ++ + RLGGDEF++A+ V DA + A IL ++K + + +EL Sbjct: 322 VDVARRIGANLRSQDTIARLGGDEFVLAVAVDEPADAADVADKILAVIRKPFRVSEHELR 381 Query: 363 VTASVGISMTPLHGTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLRRMSLEKDL 422 V+AS+GI++ P +G+D LM AD A+Y +K G+N + F+ MN + + + ++L Sbjct: 382 VSASIGIALYPGNGSDFRDLMTNADAAMYHAKALGRNAYCFFEASMNANVREHLKIVQEL 441 Query: 423 RKALARSEFMVVYQPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGLIVPIT 482 R AL R E ++ YQPK+D +G+EALLRW HP G+ISP +FI IAE+TGLIVPI Sbjct: 442 RLALERRELVLHYQPKFDVPHGPIIGVEALLRWMHPTRGLISPDQFISIAEKTGLIVPIG 501 Query: 483 YWMLHDVCGQNKLWHKACVANVAVSINMSARMFEGGSLYDVVEEALVRSGLEPHFLELEI 542 W+L + C Q ++W A + +++N+S F SL VVE L R LEPH L LEI Sbjct: 502 EWVLDEACRQMRVWCDAGRTDWTMAVNLSPLQFGHASLIRVVEATLQRHALEPHCLTLEI 561 Query: 543 TESIAMNNMEETVAQLSKLRNLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVFIRKSK 602 TES AM + + ++ L +L ++GVR+S+DDFGTG+SSL L +P + LKID+ FIR + Sbjct: 562 TESTAMRDADASLRILQQLHDMGVRISIDDFGTGYSSLLYLKRLPASELKIDRGFIRDLE 621 Query: 603 MHXXXXXXXXXXXXX-XXLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPVSELG 661 L++++VAEGVET Q + L LGC +QGF GRPMP Sbjct: 622 HDTEDAAIISAIVALGRALDLKIVAEGVETAAQQQFLTRLGCNSLQGFLLGRPMPADHFV 681 Query: 662 QWFIENTA 669 + + TA Sbjct: 682 EMTTQGTA 689 >Q1LEV1.1 Q1LEV1_RALME Diguanylate cyclase/phosphodiesterase Length = 709 Score = 402 bits (1032), Expect = e-110, Method: Compositional matrix adjust. Identities = 233/654 (35%), Positives = 353/654 (53%), Gaps = 22/654 (3%) Query: 37 SAGRVRRLWLLSSACVLGSGIWAMHFVGVMASYLPFKVSYHPGIAGCSLLISMCACYLSL 96 ++GR RLWL A +G GIW+MHF+G+++ LP + Y P I SLLI++ A +L Sbjct: 54 ASGRYARLWLAGGAVAMGLGIWSMHFLGMLSFSLPIPLGYDPAITAVSLLIAVVASAFAL 113 Query: 97 WVATMSPLRTGRXXXXXXXXXXXXXXXHYMGMYSMKLQAEIHYETLTQGLXXXXXXXXXX 156 + + L R HY GM ++++Q I Y+ L Sbjct: 114 RLVCLEHLPRRRLALGALVLGGAVASMHYTGMAALRMQPGIQYDPWLFLLSILIAVGASG 173 Query: 157 XXXFLFHKFKDY-AGFSRWKLYSAVFIGLAVTGMHYISLRASILEVDNWTGTR------- 208 ++ + + + + + +A+ +G AV MHY + A+ + + G Sbjct: 174 AALWIAFRLRRHMPRVHQLRFGAALVMGGAVAAMHYTGMAAARFPIGSVCGAAGGGLQGN 233 Query: 209 ----PLLIESDXXXXXXXXXXXXFM-----LAVSCGAVFLDRHVLERMAYHDPLTELPNR 259 P+L+ + M AV A+ + LE +A HD LT LPNR Sbjct: 234 TLALPILVITICVLAVALITSVLDMRLEMRTAVLADALGVANEELEFLALHDKLTHLPNR 293 Query: 260 HGLERYFKGEFFGG--HSG--AVFFVDLDRFKSINDTLGHDIGDMLLQEVAGRLRGVISA 315 LE F H G AV FVDLD FK +NDT GH +GD LL E+A RLR +S+ Sbjct: 294 VLLEDRFTLAIQAAARHHGRFAVLFVDLDGFKGVNDTYGHQVGDGLLVEIANRLRASVSS 353 Query: 316 KGKVFRLGGDEFLIALPVCTMEDAREEAQHILRELKKAYSIEGNELYVTASVGISMTPLH 375 + + R+GGDEF++ + V EDA A ++ L++ ++ G+ ++V+ S+GI++ P+ Sbjct: 354 EDTIARVGGDEFVLLVHVDEPEDAGVVAGKLIDVLREPANVAGHMVHVSGSIGIAIYPVD 413 Query: 376 GTDRSALMKAADTALYTSKDSGKNKFSVFDQEMNRHQLRRMSLEKDLRKALARSEFMVVY 435 G D+ ALM AD A+Y +K SG+N F++ MN + L +DLR AL + + Y Sbjct: 414 GQDQDALMTNADAAMYHAKASGRNASYFFERSMNHQARAQQMLIQDLRAALRNGQLQLHY 473 Query: 436 QPKWDSLMNVTVGLEALLRWRHPEHGIISPAEFIPIAEETGLIVPITYWMLHDVCGQNKL 495 QPK+ + NV VG EALLRW HP G++ P +FI +AE+TG IVPI W+L++ C Q L Sbjct: 474 QPKFSAADNVLVGAEALLRWNHPVQGLLMPDQFITLAEKTGAIVPIGTWVLNEACRQLAL 533 Query: 496 WHKACVANVAVSINMSARMFEGGSLYDVVEEALVRSGLEPHFLELEITESIAMNNMEETV 555 WH A+ ++++N+SA F + + V EAL R +EP L LEITE+ AM ++E T+ Sbjct: 534 WHDMGHAHWSMAVNLSALQFCHAGMVESVAEALARHKVEPRRLTLEITETTAMRDVETTL 593 Query: 556 AQLSKLRNLGVRVSLDDFGTGFSSLGNLDEIPVNTLKIDQVFIRK-SKMHXXXXXXXXXX 614 A +++L +GVR+++DDFGTG+SSL +L IP + LKID+ F+R ++ Sbjct: 594 AIMTQLDEMGVRIAIDDFGTGYSSLLHLKRIPASELKIDRGFVRDLAEDSEDAAIVSAIV 653 Query: 615 XXXXXLNMEVVAEGVETPEQIELLQSLGCRVMQGFYYGRPMPVSELGQWFIENT 668 LN++VVAEGVET Q L LGC +QG+ GRPMP ++ + + + Sbjct: 654 ALGRTLNLQVVAEGVETTAQRSFLAGLGCDALQGYLLGRPMPAAQFTELALADV 707 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.138 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,460,548,348 Number of extensions: 129654007 Number of successful extensions: 436438 Number of sequences better than 1.0e-05: 17360 Number of HSP's gapped: 399487 Number of HSP's successfully gapped: 17546 Length of query: 669 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 526 Effective length of database: 1,713,491,058 Effective search space: 901296296508 Effective search space used: 901296296508 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 135 (56.6 bits)