BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0256.0045.p
         (179 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KLR0.1 B3KLR0_9BACI Putative uncharacterized protein                 99   1e-19

>B3KLR0.1 B3KLR0_9BACI Putative uncharacterized protein
          Length = 183

 Score = 99.4 bits (246), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 2/179 (1%)

Query: 3   RSWLIGTAVLITAASALIL-PQLATLEPSLHRQDGVV-ETLSGGGVVLESSNLVDMLEKL 60
           + W    AVL+ AA A IL   L  L+     + G V   +      L  + LVD L  L
Sbjct: 2   KHWQSVQAVLLPAAIAFILLGLLMGLQSQARYKVGAVPAAVPYHSRELSDAGLVDSLMSL 61

Query: 61  PLTLAIDRAGWKGNVLSLDLKVTGNDPEPQELYQNMARVISFAFQETVNVDQLLLRIVAE 120
           PL L I RA ++   L+LD+K++       E+Y+++A ++S++F  T NV QL LR+VA 
Sbjct: 62  PLNLQISRADYEEGALTLDIKLSDATETASEVYEDIASIMSYSFDGTDNVRQLYLRVVAI 121

Query: 121 DKWLDSRRLLLAGDIRRSEWSPRLQDALETAPSRPLPESVKSGLRISESELWKKQFIYP 179
           D+W   R +LLA ++ R  W  R  + L    +  +P SV + L ++ + LW KQF  P
Sbjct: 122 DRWGGKRYMLLASNMNREAWDSRYAEVLTQLENEDVPPSVAAALNLTFTNLWPKQFSGP 180


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.134    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,052,746,451
Number of extensions: 40754298
Number of successful extensions: 111754
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 111755
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 3,060,696,203
Length adjustment: 127
Effective length of query: 52
Effective length of database: 1,864,227,298
Effective search space: 96939819496
Effective search space used: 96939819496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)