BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0256.0028.p (202 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KLS4.1 B3KLS4_9BACI N-(5'-phosphoribosyl)anthranilate isomeras... 210 5e-53 C0ZCE4.1 TRPF_BREBN N-(5'-phosphoribosyl)anthranilate isomerase ... 149 1e-34 B1DMG4.1 B1DMG4_9BACL N-(5'-phosphoribosyl)anthranilate isomeras... 149 2e-34 C3IYU5.1 C3IYU5_9BACI Phosphoribosylanthranilate isomerase EC=5.... 125 2e-27 B7Y7Q3.1 B7Y7Q3_9BACI N-(5'-phosphoribosyl)anthranilate isomeras... 125 2e-27 >B3KLS4.1 B3KLS4_9BACI N-(5'-phosphoribosyl)anthranilate isomerase EC=5.3.1.24 Length = 224 Score = 210 bits (535), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 112/201 (55%), Positives = 134/201 (66%), Gaps = 4/201 (1%) Query: 1 VDYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLK 60 VDYIGFVFA+SRRRV+P QAA+L+ L EWE+ P A GV VNP L+ELA LL L Sbjct: 25 VDYIGFVFAKSRRRVTPQQAAQLMQVLREWEHDKIPAAVGVLVNPDLSELAELLQETALD 84 Query: 61 VIQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDT 120 V+QLHG+ES + CR VK FP V V+KA+S+ E A+ AL YAG +D LL+DT Sbjct: 85 VVQLHGQESPQFCREVKERFP-VSVFKAVSIGSDRPE--AERLSALDSYAGCIDGLLIDT 141 Query: 121 YDPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXX 180 YDP GGSG+TF W +IP+YQQ A G+PLFVAGGL PDNV L+ YAPY Sbjct: 142 YDPVYGGGSGKTFAWDRIPAYQQWAERQGIPLFVAGGLDPDNVAHLIGQYAPYGVDVSSG 201 Query: 181 XXXX-XXKDLIKMTAFVERVK 200 KD+ K+TAFVERVK Sbjct: 202 VESEPGVKDINKVTAFVERVK 222 >C0ZCE4.1 TRPF_BREBN N-(5'-phosphoribosyl)anthranilate isomerase EC=5.3.1.24 Length = 222 Score = 149 bits (377), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 114/200 (57%), Gaps = 13/200 (6%) Query: 1 VDYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLK 60 VDY+G VFA S+R+V A +L+A + G+PP A GVFVNPT+ EL +LS PL Sbjct: 23 VDYVGLVFAPSKRQVDAQTAGQLLAAVP----GHPP-AVGVFVNPTMEELEEVLSEAPLS 77 Query: 61 VIQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDT 120 VIQLHG+E+ + C+ V+ F + VWKAL+V +AD A+Q Y G V A L DT Sbjct: 78 VIQLHGQETPQFCQQVRERFA-LPVWKALAVG-----GEADAALAIQSYQGIVSAFLFDT 131 Query: 121 YDPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXX 180 YDP +GG+G+ F W +IP+ Q A +AGG+H +NV EL+ Y Sbjct: 132 YDPGQAGGTGKKFSWEQIPALQAACE--AADCIIAGGIHAENVGELMGQYQAGIVDVSSG 189 Query: 181 XXXXXXKDLIKMTAFVERVK 200 KD K+ VERVK Sbjct: 190 VETDGVKDAQKIKTLVERVK 209 >B1DMG4.1 B1DMG4_9BACL N-(5'-phosphoribosyl)anthranilate isomerase EC=5.3.1.24 Length = 220 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 87/198 (43%), Positives = 111/198 (56%), Gaps = 11/198 (5%) Query: 4 IGFVFAESRRRVSPGQAAELIAGLAEWE--NGNPPLAAGVFVNPTLAELAALLSTVPLKV 61 IGFVFA S+R+V AA LI + G P GVFVNP + EL A++ PL V Sbjct: 29 IGFVFAPSKRQVDSETAAVLIESAKRLQAAEGEAPQTVGVFVNPGIEELTAIVEKAPLDV 88 Query: 62 IQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGPHALQQYAGAVDALLLDTY 121 +QLHG+E+ E CR VK + +VWK S+ K A++ A + Y GAVDA+L+DT Sbjct: 89 VQLHGQETPEFCRLVKNRLDK-KVWKVFSIGKDGADAQA----RVSAYEGAVDAILIDT- 142 Query: 122 DPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXXX 181 GG+GQTFDW I YQ AA+ +PL+VAGGLHP NV ELL G Sbjct: 143 ---AGGGTGQTFDWQLITDYQNAAAAIDVPLYVAGGLHPGNVGELLAGNPVDGIDVSSGV 199 Query: 182 XXXXXKDLIKMTAFVERV 199 KD+ K+ FV +V Sbjct: 200 ETDGRKDIEKIRLFVRKV 217 >C3IYU5.1 C3IYU5_9BACI Phosphoribosylanthranilate isomerase EC=5.3.1.24 Length = 214 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 2 DYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLKV 61 DY+GF+FAESRR VSP +E+ LA + G L GVFVN + +AA+ + +PL V Sbjct: 24 DYLGFIFAESRRNVSP---SEVQQWLAPHKLGAKQLV-GVFVNAPVRRIAAVAAELPLHV 79 Query: 62 IQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGP-HALQQYAGAVDALLLDT 120 IQ HGRE+ AVK A P + VWKA+ DG A++QYAG D ++D+ Sbjct: 80 IQCHGRETPAELAAVKEAVP-LSVWKAIH--------HGDGALAAMRQYAGIADGYVVDS 130 Query: 121 YDPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXX 180 GG+G FDW +P Y + A+ G+P F+AGG+ PDN+ LL Y P Sbjct: 131 RAAGAWGGTGVAFDWEAVPHYLEEAARQGVPCFIAGGITPDNIERLLV-YRPDGIDISSG 189 Query: 181 XXXXXXKDLIKMTAFVERVKQ 201 KD KM E++K Sbjct: 190 IETDGRKDPTKMKQIEEKIKN 210 >B7Y7Q3.1 B7Y7Q3_9BACI N-(5'-phosphoribosyl)anthranilate isomerase EC=5.3.1.24 Length = 214 Score = 125 bits (314), Expect = 2e-27, Method: Compositional matrix adjust. Identities = 80/201 (39%), Positives = 108/201 (53%), Gaps = 15/201 (7%) Query: 2 DYIGFVFAESRRRVSPGQAAELIAGLAEWENGNPPLAAGVFVNPTLAELAALLSTVPLKV 61 DY+GF+FAESRR VSP +E+ LA + G L GVFVN + +AA+ + +PL V Sbjct: 24 DYLGFIFAESRRNVSP---SEVQQWLAPHKLGAKQLV-GVFVNAPVRRIAAVAAELPLHV 79 Query: 62 IQLHGRESAELCRAVKAAFPQVQVWKALSVAKSNAESDADGP-HALQQYAGAVDALLLDT 120 IQ HGRE+ AVK A P + VWKA+ DG A++QYAG D ++D+ Sbjct: 80 IQCHGRETPAELAAVKEAVP-LSVWKAIH--------HGDGALAAMRQYAGIADGYVVDS 130 Query: 121 YDPAGSGGSGQTFDWGKIPSYQQAASEYGLPLFVAGGLHPDNVRELLDGYAPYXXXXXXX 180 GG+G FDW +P Y + A+ G+P F+AGG+ PDN+ LL Y P Sbjct: 131 RAAGAWGGTGVAFDWEAVPHYLEEAARQGVPCFIAGGITPDNIERLLV-YRPDGIDISSG 189 Query: 181 XXXXXXKDLIKMTAFVERVKQ 201 KD KM E++K Sbjct: 190 IETDGRKDPTKMKQIEEKIKN 210 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,142,183,132 Number of extensions: 44577797 Number of successful extensions: 118369 Number of sequences better than 1.0e-05: 1040 Number of HSP's gapped: 116973 Number of HSP's successfully gapped: 1040 Length of query: 202 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 73 Effective length of database: 1,845,385,268 Effective search space: 134713124564 Effective search space used: 134713124564 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 128 (53.9 bits)