BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0256.0016.p (168 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B0A9Q5.1 B0A9Q5_9CLOT Putative uncharacterized protein 190 3e-47 Q9KGA1.1 Q9KGA1_BACHD Ferripyochelin binding protein 184 2e-45 Q5WDZ9.1 Q5WDZ9_BACSK Putative uncharacterized protein 180 4e-44 C2QIP2.1 C2QIP2_BACCE Carbonic anhydrase/acetyltransferase isole... 180 4e-44 C3I7L5.1 C3I7L5_BACTU Carbonic anhydrase/acetyltransferase isole... 180 4e-44 >B0A9Q5.1 B0A9Q5_9CLOT Putative uncharacterized protein Length = 188 Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 84/157 (53%), Positives = 122/157 (77%) Query: 9 IPQLDESVYVAEGAKLVGDVRIGRQSSVWFNAVLRGDLAPVIIGDRCNIQDGTVGHVAEG 68 +P++DESV+VAE A ++GDV+IG+ SSVW+N VLRGD + IG+ NIQDGTV HV Sbjct: 31 MPEIDESVFVAESADIIGDVKIGKNSSVWYNTVLRGDEHAIRIGENTNIQDGTVVHVGLD 90 Query: 69 LPLVLGDDISVGHSAIIHGCRIGKGTLIGMGAIVLNGAEIGEYALIGAGSIVTENKIIPP 128 + V+GD+++VGH+A++HGC+IG +L+GMGAIVLNGAEIGE+ +IGAG++VT+NK P Sbjct: 91 VDTVIGDNVTVGHNALVHGCKIGNNSLVGMGAIVLNGAEIGEFCMIGAGALVTQNKKFPD 150 Query: 129 YTLSLGSPARVIRELTEQDLQRMARTCESYVLKASEY 165 L +GSPA+ +RELTE++ Q + ++ + Y A ++ Sbjct: 151 GMLIIGSPAKAVRELTEEEKQSLIKSADDYCANAQKH 187 >Q9KGA1.1 Q9KGA1_BACHD Ferripyochelin binding protein Length = 175 Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 85/167 (50%), Positives = 121/167 (72%) Query: 1 MRIGYGNYIPQLDESVYVAEGAKLVGDVRIGRQSSVWFNAVLRGDLAPVIIGDRCNIQDG 60 M Y ++ P++D + ++AE A ++G+V IG ++V FNAV+RGD + IG RCNIQ+ Sbjct: 1 MIFRYKDFSPKVDTTAFIAESATVIGNVEIGAYTTVLFNAVIRGDEGLIKIGRRCNIQEN 60 Query: 61 TVGHVAEGLPLVLGDDISVGHSAIIHGCRIGKGTLIGMGAIVLNGAEIGEYALIGAGSIV 120 + H+ E PLVL D++S+GH AI+HGC + +G LIGMGA VL+GAEIGEY+++GAGS+V Sbjct: 61 VMCHLYEQYPLVLEDEVSLGHHAIVHGCTLKQGVLIGMGATVLDGAEIGEYSIVGAGSVV 120 Query: 121 TENKIIPPYTLSLGSPARVIRELTEQDLQRMARTCESYVLKASEYGR 167 K+IPP +L LGSP +V+RE+TEQDL + T E+YV E+ R Sbjct: 121 PPGKVIPPRSLVLGSPGKVVREVTEQDLAMIEETVETYVRNGQEFKR 167 >Q5WDZ9.1 Q5WDZ9_BACSK Putative uncharacterized protein Length = 180 Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 88/165 (53%), Positives = 115/165 (69%) Query: 1 MRIGYGNYIPQLDESVYVAEGAKLVGDVRIGRQSSVWFNAVLRGDLAPVIIGDRCNIQDG 60 M + Y +P +D SVYVAEGA + GDV IG QSSVWF+ V+RGD+AP IIG+R NIQD Sbjct: 1 MILPYKGVVPTIDPSVYVAEGAIVTGDVTIGAQSSVWFHTVIRGDVAPTIIGERVNIQDQ 60 Query: 61 TVGHVAEGLPLVLGDDISVGHSAIIHGCRIGKGTLIGMGAIVLNGAEIGEYALIGAGSIV 120 ++ H + PL++ DD+++GH A++H I K LIGMG+ +L+GAEIGE A IGAGS+V Sbjct: 61 SMLHQSPHSPLMIEDDVTIGHQAMLHSAIIRKQALIGMGSTILDGAEIGEGAFIGAGSLV 120 Query: 121 TENKIIPPYTLSLGSPARVIRELTEQDLQRMARTCESYVLKASEY 165 K+IPP TL+ G PA+V+R L E D + MAR YV K Y Sbjct: 121 PPGKVIPPGTLAFGRPAKVVRPLNETDKKEMARIRREYVEKGQYY 165 >C2QIP2.1 C2QIP2_BACCE Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein Length = 170 Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 83/161 (51%), Positives = 111/161 (68%) Query: 5 YGNYIPQLDESVYVAEGAKLVGDVRIGRQSSVWFNAVLRGDLAPVIIGDRCNIQDGTVGH 64 Y P++ S ++A+ + GDV IG +SS+WFN V+RGD++P IIGDR N+QD H Sbjct: 5 YKEKNPKISSSAFIADYVTITGDVTIGEESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLH 64 Query: 65 VAEGLPLVLGDDISVGHSAIIHGCRIGKGTLIGMGAIVLNGAEIGEYALIGAGSIVTENK 124 + PL+L DD++VGH I+H C I K LIGMG+I+L+GAEIGE A IGAGS+V++ K Sbjct: 65 QSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGK 124 Query: 125 IIPPYTLSLGSPARVIRELTEQDLQRMARTCESYVLKASEY 165 IPP TL+ G PA+V+RELTE+D + M R YV K Y Sbjct: 125 KIPPNTLAFGRPAKVVRELTEEDRKDMKRIRTQYVEKGQYY 165 >C3I7L5.1 C3I7L5_BACTU Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein Length = 170 Score = 180 bits (456), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 82/161 (50%), Positives = 111/161 (68%) Query: 5 YGNYIPQLDESVYVAEGAKLVGDVRIGRQSSVWFNAVLRGDLAPVIIGDRCNIQDGTVGH 64 Y P++ S ++A+ + GDV +G++SS+WFN V+RGD++P IIGDR N+QD H Sbjct: 5 YKEKNPKIASSAFIADNVTITGDVSVGKESSIWFNTVIRGDVSPTIIGDRVNVQDQCTLH 64 Query: 65 VAEGLPLVLGDDISVGHSAIIHGCRIGKGTLIGMGAIVLNGAEIGEYALIGAGSIVTENK 124 + PL+L DD++VGH I+H C I K LIGMG+I+L+GAEIGE A IGAGS+V++ Sbjct: 65 QSPQYPLILEDDVTVGHQVILHSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGN 124 Query: 125 IIPPYTLSLGSPARVIRELTEQDLQRMARTCESYVLKASEY 165 IPP TL+ G PA+VIRELTE+D + M R YV K Y Sbjct: 125 KIPPNTLAFGRPAKVIRELTEEDRKDMKRIRTQYVEKGQYY 165 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.141 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,035,621,593 Number of extensions: 44243471 Number of successful extensions: 137088 Number of sequences better than 1.0e-05: 2281 Number of HSP's gapped: 135077 Number of HSP's successfully gapped: 2293 Length of query: 168 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 43 Effective length of database: 1,883,069,328 Effective search space: 80971981104 Effective search space used: 80971981104 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)