BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0256.0001.p (385 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DM06.1 B1DM06_9BACL Glycosyl transferase group 1 623 e-177 B3KKV5.1 B3KKV5_9BACI Glycosyl transferase group 1 607 e-172 C0ZCG7.1 C0ZCG7_BREBN Probable glycosyltransferase 503 e-140 A7GN73.1 A7GN73_BACCN Glycosyl transferase group 1 456 e-126 A9VME6.1 A9VME6_BACWK Glycosyl transferase group 1 454 e-126 >B1DM06.1 B1DM06_9BACL Glycosyl transferase group 1 Length = 387 Score = 623 bits (1607), Expect = e-177, Method: Compositional matrix adjust. Identities = 294/372 (79%), Positives = 330/372 (88%) Query: 3 RLKIGITCYPSLGGSGVVATELGKLLAEKGHEVHFITHSIPFRLGTFQKNIFYHEVEVND 62 +LKIGITCYP+LGGSGVVATELGKL+AE+GHE+HFITHSIPFRLG F KNIF+HEVEVND Sbjct: 4 KLKIGITCYPTLGGSGVVATELGKLMAERGHEIHFITHSIPFRLGKFHKNIFFHEVEVND 63 Query: 63 YYVFRYPPYDLALATKMAQVAKMVGLDLFHVHYAVPHAVCAYLAKQMLGNDIKVVTTLHG 122 YYVFRYPPYDL+LA+KMAQVAKM LDL HVHYAVPHAVCA+LAKQM+G+ K VTTLHG Sbjct: 64 YYVFRYPPYDLSLASKMAQVAKMEKLDLLHVHYAVPHAVCAHLAKQMIGDGFKTVTTLHG 123 Query: 123 TDITVLGQDESLKDLIRLGINESDAVTAVSQDLIKETRKVLDITREIDLTYNFVDKRVYY 182 TDITVL QDESLKDLIRL INESDAVTAVSQDLI ETR++LDITR IDLTYNFVDKRVYY Sbjct: 124 TDITVLAQDESLKDLIRLAINESDAVTAVSQDLINETRQLLDITRPIDLTYNFVDKRVYY 183 Query: 183 PRDVTDLRGDFAEPHEKILMHISNFRPVKRVSDVVDIFAKVSQELPSRLLLVGEGPELPK 242 PRD LR D+A+PHEKILMHISNFRPVKRVSDVVD+F +VS +LP++LLLVGEGPEL K Sbjct: 184 PRDAESLRADYAQPHEKILMHISNFRPVKRVSDVVDVFERVSSQLPAKLLLVGEGPELSK 243 Query: 243 IQAKICEMGLEDKVRFLGKQDEIAQVISLADLLLLPSEKESFGLVALEAMACGVPTIGSE 302 IQ KI +MGLED+V FLGKQ+++AQVIS+ADLLLLPSEKESFGLVALEAMACGVPT+GS Sbjct: 244 IQCKIRQMGLEDRVHFLGKQEDVAQVISMADLLLLPSEKESFGLVALEAMACGVPTVGSN 303 Query: 303 AGGIPELIQHGKTGFLAPIGDTATMAKYAVKLLSDPLMEEQFRAACLIRSCNDFSRDVIT 362 AGGIPEL+ HG+TG+L PIGD MA YA +LL D + + F+ ACL R+ N+F DVIT Sbjct: 304 AGGIPELVTHGETGYLCPIGDVEGMAAYATQLLKDEKLHQSFKEACLFRARNEFCNDVIT 363 Query: 363 NQYEDIYYRVLG 374 QYE IYYRVLG Sbjct: 364 TQYEQIYYRVLG 375 >B3KKV5.1 B3KKV5_9BACI Glycosyl transferase group 1 Length = 387 Score = 607 bits (1564), Expect = e-172, Method: Compositional matrix adjust. Identities = 288/380 (75%), Positives = 335/380 (88%) Query: 4 LKIGITCYPSLGGSGVVATELGKLLAEKGHEVHFITHSIPFRLGTFQKNIFYHEVEVNDY 63 LKIGITCYPSLGGSGVVATELGKLLAE+GH+VHFI HSIPFRLGTF KNIFYHEVEVNDY Sbjct: 6 LKIGITCYPSLGGSGVVATELGKLLAEQGHQVHFIAHSIPFRLGTFHKNIFYHEVEVNDY 65 Query: 64 YVFRYPPYDLALATKMAQVAKMVGLDLFHVHYAVPHAVCAYLAKQMLGNDIKVVTTLHGT 123 YVFRYPPYDL+LATKMAQVAKM LD+ HVHYAVPHAVCA+LAKQM+G+ +KVVTTLHGT Sbjct: 66 YVFRYPPYDLSLATKMAQVAKMQQLDVLHVHYAVPHAVCAFLAKQMVGDQLKVVTTLHGT 125 Query: 124 DITVLGQDESLKDLIRLGINESDAVTAVSQDLIKETRKVLDITREIDLTYNFVDKRVYYP 183 DITVL QDESLKDLIRL INESDAVTAVSQDLI+ETR++LDI+R+IDLTYNFVD RVYYP Sbjct: 126 DITVLAQDESLKDLIRLAINESDAVTAVSQDLIRETRELLDISRDIDLTYNFVDPRVYYP 185 Query: 184 RDVTDLRGDFAEPHEKILMHISNFRPVKRVSDVVDIFAKVSQELPSRLLLVGEGPELPKI 243 RD LR D+A+P+EKI+MHISNFRPVKRV DV++IFA+V +++P++LLLVGEGPELPKI Sbjct: 186 RDSRSLRNDYADPNEKIMMHISNFRPVKRVGDVLEIFAQVQEQVPAKLLLVGEGPELPKI 245 Query: 244 QAKICEMGLEDKVRFLGKQDEIAQVISLADLLLLPSEKESFGLVALEAMACGVPTIGSEA 303 Q +I E+GL KV FLGKQDEIA VIS+AD+LLLPSEKESFGLVALEAMACGVPT+GS A Sbjct: 246 QCRINELGLGSKVHFLGKQDEIAHVISMADVLLLPSEKESFGLVALEAMACGVPTVGSTA 305 Query: 304 GGIPELIQHGKTGFLAPIGDTATMAKYAVKLLSDPLMEEQFRAACLIRSCNDFSRDVITN 363 GGIPEL+ HG+TG+LAPIGDT +MA++ +++ D + E+ R ACL RS F ++I Sbjct: 306 GGIPELVTHGETGYLAPIGDTHSMAQHVLEICKDEALSERLRKACLQRSKTMFCNELIRG 365 Query: 364 QYEDIYYRVLGSKVHGLDTI 383 +YE+IYYRVLG +V L + Sbjct: 366 KYEEIYYRVLGREVSELKPV 385 >C0ZCG7.1 C0ZCG7_BREBN Probable glycosyltransferase Length = 380 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 238/373 (63%), Positives = 297/373 (79%) Query: 4 LKIGITCYPSLGGSGVVATELGKLLAEKGHEVHFITHSIPFRLGTFQKNIFYHEVEVNDY 63 +KIGITCYPSLGGSGVVATELGKLLAE+GH+VHFIT +PFRLG F NIFYHEVEVN+Y Sbjct: 1 MKIGITCYPSLGGSGVVATELGKLLAERGHQVHFITGGMPFRLGAFHPNIFYHEVEVNNY 60 Query: 64 YVFRYPPYDLALATKMAQVAKMVGLDLFHVHYAVPHAVCAYLAKQMLGNDIKVVTTLHGT 123 VF+YPPYDL LA +MAQVAK LDL HVHYAVPHA+CA+LAKQM+G+ +K+VTTLHGT Sbjct: 61 DVFKYPPYDLTLANRMAQVAKNENLDLLHVHYAVPHALCAFLAKQMVGDHLKIVTTLHGT 120 Query: 124 DITVLGQDESLKDLIRLGINESDAVTAVSQDLIKETRKVLDITREIDLTYNFVDKRVYYP 183 DITVLG D +L D+IR GI SD VTAVS DLI++T+++L +EI YNFVDKR YYP Sbjct: 121 DITVLGYDSNLSDMIRFGIERSDLVTAVSNDLIRQTKELLHTEKEIVPVYNFVDKRRYYP 180 Query: 184 RDVTDLRGDFAEPHEKILMHISNFRPVKRVSDVVDIFAKVSQELPSRLLLVGEGPELPKI 243 ++VT L+ FA EKILMHISNFRPVKRV DV++IF++V +E+PSRL+L+GEGPE+ + Sbjct: 181 KEVTKLKKVFAPNGEKILMHISNFRPVKRVPDVIEIFSRVREEVPSRLILIGEGPEMGLV 240 Query: 244 QAKICEMGLEDKVRFLGKQDEIAQVISLADLLLLPSEKESFGLVALEAMACGVPTIGSEA 303 + I E+GL D V FLGKQ+++A+V+S+AD++LLPSEKESFGLVALEAMACGVP + + A Sbjct: 241 RKMIAELGLNDDVCFLGKQEDVAEVLSMADIMLLPSEKESFGLVALEAMACGVPVVATVA 300 Query: 304 GGIPELIQHGKTGFLAPIGDTATMAKYAVKLLSDPLMEEQFRAACLIRSCNDFSRDVITN 363 GG+PE++ G GFL PIGD MAK ++LL + + +F A + RSC F + I + Sbjct: 301 GGLPEVVLDGVNGFLRPIGDVEGMAKETIRLLQNEELYREFSANSIERSCKTFCHETIAS 360 Query: 364 QYEDIYYRVLGSK 376 QYE +Y +L SK Sbjct: 361 QYEALYANLLVSK 373 >A7GN73.1 A7GN73_BACCN Glycosyl transferase group 1 Length = 381 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 217/372 (58%), Positives = 283/372 (76%), Gaps = 1/372 (0%) Query: 3 RLKIGITCYPSLGGSGVVATELGKLLAEKGHEVHFITHSIPFRLGTFQKNIFYHEVEVND 62 +LKIGITCYPS+GGSGVV TELGK LAE+GHE+HFIT +PFRL NI++HEV VN Sbjct: 2 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGVPFRLNKVYPNIYFHEVTVNQ 61 Query: 63 YYVFRYPPYDLALATKMAQVAKMVGLDLFHVHYAVPHAVCAYLAKQMLGNDIKVVTTLHG 122 Y VF+YPPYDLALA+KMA+VA+ LD+ HVHYA+PHA+CAYLAKQM+G+ IK+VTTLHG Sbjct: 62 YSVFQYPPYDLALASKMAEVAQREKLDILHVHYAIPHAICAYLAKQMIGDHIKIVTTLHG 121 Query: 123 TDITVLGQDESLKDLIRLGINESDAVTAVSQDLIKETRKVLDITREIDLTYNFVDKRVYY 182 TDITVLG D SL +LIR GI +SD VTAVS LIKET +++ +EI YNF+D+RVY+ Sbjct: 122 TDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLIKETNELVKPNKEIQTVYNFIDERVYF 181 Query: 183 PRDVTDLRGDFA-EPHEKILMHISNFRPVKRVSDVVDIFAKVSQELPSRLLLVGEGPELP 241 RD++ L+ ++ EKIL+HISNFR VKRV DVV FAKV +E+ ++LLLVG+GPE Sbjct: 182 KRDMSQLKKEYGISEDEKILIHISNFRKVKRVQDVVQAFAKVVKEVNAKLLLVGDGPEFC 241 Query: 242 KIQAKICEMGLEDKVRFLGKQDEIAQVISLADLLLLPSEKESFGLVALEAMACGVPTIGS 301 I + + +E++V FLGKQD +A++++++D++LL SEKESFGLV LEAMACGVP IGS Sbjct: 242 TILQLVKNLHIEERVLFLGKQDNVAELLAMSDVMLLLSEKESFGLVLLEAMACGVPCIGS 301 Query: 302 EAGGIPELIQHGKTGFLAPIGDTATMAKYAVKLLSDPLMEEQFRAACLIRSCNDFSRDVI 361 GGIPE+I+HG+TG++ +GDT+ +AK A++LL + + L F + I Sbjct: 302 RVGGIPEVIKHGETGYICEVGDTSEVAKQAIQLLQNKELHRNMADQALETVHEQFRSENI 361 Query: 362 TNQYEDIYYRVL 373 +QYE IYY +L Sbjct: 362 VSQYEAIYYDIL 373 >A9VME6.1 A9VME6_BACWK Glycosyl transferase group 1 Length = 381 Score = 454 bits (1169), Expect = e-126, Method: Compositional matrix adjust. Identities = 216/378 (57%), Positives = 286/378 (75%), Gaps = 1/378 (0%) Query: 3 RLKIGITCYPSLGGSGVVATELGKLLAEKGHEVHFITHSIPFRLGTFQKNIFYHEVEVND 62 +LKIGITCYPS+GGSGVV TELGK LAE+GHE+HFIT +PFRL NI++HEV VN Sbjct: 2 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGVPFRLNKVYPNIYFHEVTVNQ 61 Query: 63 YYVFRYPPYDLALATKMAQVAKMVGLDLFHVHYAVPHAVCAYLAKQMLGNDIKVVTTLHG 122 Y VF+YPPYDLALA+KMA+VA+ LD+ HVHYA+PHA+CAYLAKQM+G IK+VTTLHG Sbjct: 62 YSVFQYPPYDLALASKMAEVAQRENLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHG 121 Query: 123 TDITVLGQDESLKDLIRLGINESDAVTAVSQDLIKETRKVLDITREIDLTYNFVDKRVYY 182 TDITVLG D SL +LIR GI +SD VTAVS LI+ET +++ +EI+ YNFVD+RVY+ Sbjct: 122 TDITVLGSDPSLNNLIRFGIEQSDVVTAVSHSLIEETNELVKPDKEIETVYNFVDERVYF 181 Query: 183 PRDVTDLRGDFA-EPHEKILMHISNFRPVKRVSDVVDIFAKVSQELPSRLLLVGEGPELP 241 RD++ L+ ++ +EK+L+HISNFR VKRV DVV FAK+ +E+ ++LLLVG+GPE Sbjct: 182 KRDMSQLKKEYGIRENEKVLIHISNFRKVKRVQDVVQSFAKIVKEVDAKLLLVGDGPEFC 241 Query: 242 KIQAKICEMGLEDKVRFLGKQDEIAQVISLADLLLLPSEKESFGLVALEAMACGVPTIGS 301 I + + +E++V FLGKQD +A++++++DL+LL SEKESFGLV LEAMACGVP+IG+ Sbjct: 242 TILQLVKSLHIEERVLFLGKQDNVAELLAMSDLMLLLSEKESFGLVILEAMACGVPSIGT 301 Query: 302 EAGGIPELIQHGKTGFLAPIGDTATMAKYAVKLLSDPLMEEQFRAACLIRSCNDFSRDVI 361 GGIPE+IQHG+TG++ +GDT +AK A++LL + + + F + I Sbjct: 302 RVGGIPEVIQHGETGYICEVGDTDGIAKQAIQLLENEELHRNMGERAMKSVYEQFRSEKI 361 Query: 362 TNQYEDIYYRVLGSKVHG 379 +QYE IYY +L +G Sbjct: 362 VSQYEAIYYDILRDDKNG 379 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.140 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,210,929,679 Number of extensions: 90165866 Number of successful extensions: 264289 Number of sequences better than 1.0e-05: 6428 Number of HSP's gapped: 263039 Number of HSP's successfully gapped: 6433 Length of query: 385 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 248 Effective length of database: 1,770,017,148 Effective search space: 438964252704 Effective search space used: 438964252704 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)