BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0251.0033.p (939 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1ZZ16.1 B1ZZ16_OPITP Alpha-L-rhamnosidase 742 0.0 C1ZRS2.1 C1ZRS2_RHOMR Alpha-L-rhamnosidase 711 0.0 C4DA72.1 C4DA72_9SPHI Alpha-L-rhamnosidase 674 0.0 B1DK33.1 B1DK33_9BACL Alpha-L-rhamnosidase 670 0.0 C1Z071.1 C1Z071_PEDHE Alpha-L-rhamnosidase 654 0.0 >B1ZZ16.1 B1ZZ16_OPITP Alpha-L-rhamnosidase Length = 941 Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust. Identities = 408/946 (43%), Positives = 554/946 (58%), Gaps = 82/946 (8%) Query: 3 STYDLKTEHLRNPLGLDNKSPRFSWKINSDARNMTQNAYQVQASA---SETFDSILWDSG 59 +T L TE+ +P+G+D PR SW++ SDAR +TQ AYQ+Q + + + WDSG Sbjct: 52 TTAALTTEYQTDPVGIDVARPRLSWQLRSDARGLTQAAYQIQVALGMDALARGDLFWDSG 111 Query: 60 KV-TGRAQRLEYSGPELKSAVRIFWRVKIWDNDGNESAFSEPALFEMGLLNAADWKAKWI 118 K+ + ++ +++Y+GP L S+ R WRV+ W+ G S +S PA +EMGLL +DW A WI Sbjct: 112 KIASDQSVQVDYAGPVLSSSQRYIWRVRTWNRSGEASDWSAPAFWEMGLLRPSDWSAAWI 171 Query: 119 EPESEVDPDAYKPAPYIRKEFNVRSGLVSARAYMTARGLYKFYMNGTEGTDHLFTPGFTS 178 P + D PAP +RKEF V + AR Y+T+ GLY+ +NG D + TPG+TS Sbjct: 172 TPAWDEDTSKSNPAPLLRKEFAVEGEIRDARLYVTSLGLYEAELNGQRVGDAVLTPGWTS 231 Query: 179 YYARLQYQVYDITHLLKEGANAWGILLSDGWWRGS-TGVLLKNNFGYKVAFLGQVVLSYD 237 Y RL YQ YD+T LK GANA G+ L +GW+RG T L +N +G +VA L Q+ ++Y Sbjct: 232 YDHRLVYQTYDVTSQLKSGANALGVTLGNGWYRGPLTWDLERNTYGDRVALLAQLRITYA 291 Query: 238 DGSREIIASDGSFTTSSGPLLKSDLKAGEVYDARIDIEGWNTVGFNDADWTAVHVKDYGI 297 DG + IASD S+ S+GP+L S++ AGE YDAR+ GW+ G++D DW+AV V D+ Sbjct: 292 DGRIQTIASDASWKASTGPILLSEIYAGECYDARLKKSGWSQPGYDDRDWSAVRVLDHRK 351 Query: 298 DHLVAS-SLPVRTREEFTP-RIIETPNGETVLDFGQNIAGWVEMKLQGDAGTEVVLVHGE 355 D LVA S P+R EE P I+ TP GETV+DFGQN+ GWV +K+ G AGT V L H E Sbjct: 352 DILVAPLSPPMRRIEEIKPVAILHTPAGETVIDFGQNMVGWVRLKVHGPAGTTVTLRHAE 411 Query: 356 TLDKNGNFTLSNLEHTGPLNDFQEIHYILNGRSEEVYRPYFTIFGFRYVLLKNVPGKPKP 415 LDK GNF +NL H Q+I Y L+GR +E + P+FT GFRYV ++ PG+P Sbjct: 412 VLDKAGNFYTANLRHAA-----QQIDYTLSGRGDETFEPHFTFQGFRYVAVQGWPGEPSL 466 Query: 416 DHFTAFAIYSDMEEAGDFACSNPLINQLVSNSRWSMKSNFMEIPTDCPTR-ERAGWTGDA 474 + FT ++SD+ G + SN +NQL N W K NF+++PTDCP R ER GWTGDA Sbjct: 467 ESFTGIVVHSDLPRTGHWESSNARLNQLQHNILWGQKGNFVDVPTDCPQRDERLGWTGDA 526 Query: 475 QLFARTAADFMNVHAFYEKWLADLAAEQFPSGAVGSTVPQVLGFHSVDEYERVVKNANDP 534 Q+FARTAA +NV F+ KWL D+AA+Q PSGAV +P VL + E Sbjct: 527 QVFARTAAFNLNVVGFFTKWLRDVAADQKPSGAVPFVIPDVLSRNKETE----------- 575 Query: 535 LLAMLASTKPGEPGYLDGSAGWGDAAVIAPWTMYLCYGDQSILERQYDSAKAWVEYMKTN 594 GS+GW D A IAPWT+YL YGD+ LE QY S KAWVE+++T Sbjct: 576 -----------------GSSGWSDVATIAPWTLYLVYGDRRALETQYPSMKAWVEFIRTR 618 Query: 595 AENDSDHYKDAAYYHNDTDGEPDAKFIWDTKFHYGEWLEADIDHSPEQMGAEIQTRMFKG 654 A+ D +W T +H+G+WL SP+ GA G Sbjct: 619 AKGD----------------------LWTTGWHFGDWLSYATT-SPDYPGAT------TG 649 Query: 655 DPLTATAYYGYSTRLLSEMAAVLGKREDAERYAKLHEKIKRVYNKYFIPENGLIQEGRQA 714 L A+A+Y +S LLS+ A VLGK +DA Y +L E+IK +N+ F+ +G + E Q Sbjct: 650 KDLIASAFYAHSADLLSKAATVLGKADDARTYTELFERIKVAFNREFVTPSGRVGEATQT 709 Query: 715 PLVRTLAFGLAGEDRKQAMADRLAELVIEQDYHLNTGFLSTPFILHVLADYGYPDVAYRL 774 V L F L ED++ A RLA V HL TGFL TP++ VL+D+G D AY L Sbjct: 710 AYVLALQFDLLPEDKRPEAARRLAADVKRFGNHLTTGFLGTPYLCRVLSDHGQLDTAYAL 769 Query: 775 LEQDTCPSWLYAVAKSATTIWESWNGISPEGEL----AYSLNHYSYGAVCNFLFAGVAGI 830 L QDT PSWLY V++ ATTIWE W+GI P+G S NHY+YGA+ +++++ VAGI Sbjct: 770 LNQDTYPSWLYPVSQGATTIWERWDGIKPDGTFQDAGMNSFNHYAYGAIGDWMYSVVAGI 829 Query: 831 RPVPEQAGYEHFIIKPWIGGTMTHASATHESPYGKIESGWRKTEDGVAYRFVVPANTTAT 890 P GY+H +I+P GG +T A E+ YG++ S W+ + + +P NT AT Sbjct: 830 DIDPAAPGYKHLLIQPRPGGGLTDVRARLETQYGQVASAWKLADGHLELVVEIPPNTRAT 889 Query: 891 VMLEGS------EEDAKRL--SADFEQVSYKDGRVTLEVGSGSYHI 928 + L G+ E + L +A QVS +D V + GSG Y Sbjct: 890 IRLPGAARMKDVRESGQPLARAAGITQVSRRDDAVIVAAGSGEYRF 935 >C1ZRS2.1 C1ZRS2_RHOMR Alpha-L-rhamnosidase Length = 935 Score = 711 bits (1835), Expect = 0.0, Method: Compositional matrix adjust. Identities = 393/948 (41%), Positives = 546/948 (57%), Gaps = 79/948 (8%) Query: 2 LSTYDLKTEHLRNPLGLDNKSPRFSWKINSDARNMTQNAYQVQASASETF----DSILWD 57 L L+TE+L NP+G++ + PR SW++ SD R++ Q AYQ+Q + S ++WD Sbjct: 20 LQVASLRTEYLVNPIGIEVRQPRLSWQLQSDRRDVRQVAYQIQVATSREALARGRDLVWD 79 Query: 58 SGKV-TGRAQRLEYSGPELKSAVRIFWRVKIWDNDGNESAFSEPALFEMGLLNAADWKAK 116 SG+V + ++ + Y GP L+ R +WRV++WDN G SA+SEPA +EMGLL+ +W+A+ Sbjct: 80 SGRVESDQSVFVPYGGPALQRRQRYYWRVRVWDNHGRSSAWSEPAFWEMGLLSPDEWRAQ 139 Query: 117 WIEPESEVDPDAYKPAPYIRKEFNVRSGLVSARAYMTARGLYKFYMNGTEGTDHLFTPGF 176 WI E D +PAP +R+ F V + AR Y+T+ GLY+ ++NG D LFTPG+ Sbjct: 140 WITYNWEEDTSQPQPAPMLRRTFRVEGRVRRARLYITSLGLYEAHLNGRRVGDQLFTPGW 199 Query: 177 TSYYARLQYQVYDITHLLKEGANAWGILLSDGWWRGS-TGVLLKNNFGYKVAFLGQVVLS 235 TSY+ RLQYQ YD+T LL+ G NA G++L DGW+RG T + +N +G ++A L Q+ ++ Sbjct: 200 TSYHHRLQYQTYDVTDLLRPGENALGVILGDGWYRGYLTWSVRRNVYGDRLALLAQLEIT 259 Query: 236 YDDGSREIIASDGSFTTSSGPLLKSDLKAGEVYDARIDIEGWNTVGFNDADWTAVHVKDY 295 Y+DG +++ SD + ++GP+ SD+ GE+YDAR++ EGW G++D+DW V V ++ Sbjct: 260 YEDGRTQVVTSDPDWKATTGPIRMSDIYMGEIYDARLEKEGWTEPGYDDSDWRGVRVLEH 319 Query: 296 GIDHLVAS-SLPVRTREEFTP-RIIETPNGETVLDFGQNIAGWVEMKLQGDAGTEVVLVH 353 D L+A PVR +E P I+ TP G+TV+D GQN+ GWV ++++G AGT V L H Sbjct: 320 PKDILIAPIGPPVRRIQEIRPVAILYTPAGDTVVDMGQNMVGWVRLRVRGPAGTVVTLRH 379 Query: 354 GETLDKNGNFTLSNLEHTGPLNDFQEIHYILNGRSEEVYRPYFTIFGFRYVLLKNVPGKP 413 E LDK+GNF NL Q YIL G EEV+ P+FT GFRYV + PG+ Sbjct: 380 AEVLDKHGNFYTENLRRAR-----QTDQYILKGEGEEVFEPHFTFHGFRYVAVSGYPGEL 434 Query: 414 KPDHFTAFAIYSDMEEAGDFACSNPLINQLVSNSRWSMKSNFMEIPTDCPTR-ERAGWTG 472 P+ T I+S E G + S+ L+N+L N +W MK NF+++PTDCP R ER GWTG Sbjct: 435 TPEAITGIVIHSAFEPTGTWVSSDSLLNRLQLNIQWGMKGNFLDVPTDCPQRDERLGWTG 494 Query: 473 DAQLFARTAADFMNVHAFYEKWLADLAAEQFPSGAVGSTVPQVLGFHSVDEYERVVKNAN 532 DAQ+FARTA V F+ KWL D+AA+Q P GAV VP V Sbjct: 495 DAQVFARTAMFNGLVGGFFTKWLGDVAADQSPEGAVPHVVPNV----------------- 537 Query: 533 DPLLAMLASTKPGEPGYLDGSAGWGDAAVIAPWTMYLCYGDQSILERQYDSAKAWVEYMK 592 L A PG G+ GW DAAV+ PWTMY YGD+ ILE QY S KAWVEYM+ Sbjct: 538 ---LPSFAGRFPG------GATGWADAAVVIPWTMYQVYGDRRILEVQYPSMKAWVEYMR 588 Query: 593 TNAENDSDHYKDAAYYHNDTDGEPDAKFIWDTKFHYGEWLEADIDHSPEQMGAEIQTRMF 652 A +D IWDT FH+G+WL PE+ Sbjct: 589 REAGDD---------------------LIWDTGFHFGDWLA----FVPEENVRRAYPGAT 623 Query: 653 KGDPLTATAYYGYSTRLLSEMAAVLGKREDAERYAKLHEKIKRVYNKYFIPENGLIQEGR 712 G ATAY+ YSTRLL++ A V+GK ++A Y +L+E I+ +N+ F+ NG + + Sbjct: 624 TGRDFLATAYFAYSTRLLAQAAEVIGKTDEARHYRQLYEAIREAFNREFVTPNGRVAQAT 683 Query: 713 QAPLVRTLAFGLAGEDRKQAMADRLAELVIEQDYHLNTGFLSTPFILHVLADYGYPDVAY 772 Q + F L E + RLAE V + HL TGFL TP +LH L++ G DVAY Sbjct: 684 QTAYTLAIQFDLLPEHLRAEAGRRLAEDVRAHNMHLTTGFLGTPQLLHALSNTGQLDVAY 743 Query: 773 RLLEQDTCPSWLYAVAKSATTIWESWNGISPEGEL----AYSLNHYSYGAVCNFLFAGVA 828 LL Q T PSWLY V ATT+WE W+ I P+ S NHY+YG+V ++++ VA Sbjct: 744 TLLRQTTYPSWLYQVKMGATTMWERWDSIKPDSTFQDPSMNSFNHYAYGSVGDWMYRVVA 803 Query: 829 GIRPVPEQAGYEHFIIKPWIGGTMTHASATHESPYGKIESGWRKTE-DGVAYRFVVPANT 887 GI E GY+ I P GG + A + S YG++ S W + +P NT Sbjct: 804 GID--TETPGYQRLRIAPQPGGGLKWVQARYHSLYGEVASSWELVDPQTFVLEVTIPPNT 861 Query: 888 TATVMLEGSE----EDAKR--LSADFEQVSYKDGR-VTLEVGSGSYHI 928 TATV L G++ ++ ++ SA +Y+DG V +EVGSG+Y Sbjct: 862 TATVRLPGAQLASVQEGRQPVQSAAGVHRAYQDGADVVVEVGSGTYRF 909 >C4DA72.1 C4DA72_9SPHI Alpha-L-rhamnosidase Length = 904 Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/943 (39%), Positives = 540/943 (57%), Gaps = 77/943 (8%) Query: 2 LSTYDLKTEHLRNPLGLDNKSPRFSWKINSDARNMTQNAYQVQAS--ASETFDSILWDSG 59 +S L TE+ NP+GLD PR SW++ + RN+ Q AY+++ S A+ W SG Sbjct: 14 VSVQQLLTENRTNPVGLDVTIPRLSWQLVTTKRNVLQTAYEIRVSTDAASVAKGTSWQSG 73 Query: 60 KVTG-RAQRLEYSGPELKSAVRIFWRVKIWDNDGNE-SAFSEPALFEMGLLNAADWKAKW 117 +V ++ + Y G L+ + R +W+V++WDN + SA+S PA ++ GL+ AA+WKAKW Sbjct: 74 RVASEQSVHVPYGGAALQPSQRYYWQVRVWDNTSPKPSAWSAPAFWQTGLMTAANWKAKW 133 Query: 118 IEPESEVDPDAYKPAPYIRKEFNVRSGLVSARAYMTARGLYKFYMNGTEGTDHLFTPGFT 177 I+ D + P+P RK F + SA YMTA G+Y+ +NG D TPG+T Sbjct: 134 IQQGFPGD-SVHSPSPLFRKAFTASKKVRSAVLYMTAHGIYEAQINGKRVGDACLTPGWT 192 Query: 178 SYYARLQYQVYDITHLLKEGANAWGILLSDGWWRGSTG-VLLKNNFGYKVAFLGQVVLSY 236 SY LQYQ Y++T LL +G NA G+ L GW+RG G KN +G ++A LGQ+ ++Y Sbjct: 193 SYNQHLQYQTYEVTALLNQGRNAIGVTLGSGWYRGRMGWADQKNIYGTQLALLGQLAITY 252 Query: 237 DDGSREIIASDGSFTTSSGPLLKSDLKAGEVYDARIDIEGWNTVGFNDADWTAVHVKDYG 296 DGS E I++D S+ +S+GP+ S++ GEVYD+R++ GW + DADW+ V VK +G Sbjct: 253 TDGSSETISTDESWKSSTGPIRFSEIYDGEVYDSRLEKTGWTLPAYADADWSGVSVKPFG 312 Query: 297 IDHLVAS-SLPVRTREEFTP-RIIETPNGETVLDFGQNIAGWVEMKLQGDAGTEVVLVHG 354 +LVA+ + +R E P +++ TP G+TVLDFGQN+ GWV++++ G AG +VVL H Sbjct: 313 YANLVANYNELIRRHETVKPVKVLTTPKGKTVLDFGQNLVGWVQLRVTGKAGDKVVLSHV 372 Query: 355 ETLDKNGNFTLSNLEHTGPLNDFQEIHYILNGRSEEVYRPYFTIFGFRYVLLKNVPGKPK 414 E LDK GN L NL + Y+L G +E + P+FT FGFRYV + + G Sbjct: 373 EMLDKFGNPYLENLRTAK-----AQATYLLKGGTETL-EPHFTFFGFRYVQVDGLTGPVN 426 Query: 415 PDHFTAFAIYSDMEEAGDFACSNPLINQLVSNSRWSMKSNFMEIPTDCPTR-ERAGWTGD 473 P FT +YSDM + G+F SNPLINQL SN +W + NF+++PTDCP R ER GWTGD Sbjct: 427 PADFTVVTLYSDMPKTGEFTTSNPLINQLQSNIQWGQRGNFLDVPTDCPQRDERLGWTGD 486 Query: 474 AQLFARTAADFMNVHAFYEKWLADLAAEQFPSGAVGSTVPQVLGFHSVDEYERVVKNAND 533 A++F+RTAA V++F+ KWL D++A+QFP+GAV +P VL + Sbjct: 487 AEVFSRTAAFNFGVNSFFTKWLKDVSADQFPNGAVPFVIPDVL-------------RGPN 533 Query: 534 PLLAMLASTKPGEPGYLDGSAGWGDAAVIAPWTMYLCYGDQSILERQYDSAKAWVEYMKT 593 P +A G+AGW DA++I PW MY+ YGD+ ++E+QY S KA+ YM+ Sbjct: 534 PSMA--------------GAAGWSDASIIIPWNMYVAYGDRRLIEQQYASMKAYQGYMEG 579 Query: 594 NAENDSDHYKDAAYYHNDTDGEPDAKFIWDTKFHYGEWLEADIDHSPEQMGAEIQTRMFK 653 A+ND +W F +G+WL A+ F Sbjct: 580 VAKND----------------------LWSEGFQFGDWLSFVTTEGSPAFEAK---SAFT 614 Query: 654 GDPLTATAYYGYSTRLLSEMAAVLGKREDAERYAKLHEKIKRVYNKYFIPENGLIQEGRQ 713 L A +Y YST L+ + A VLGK +DA YA L E+I++ + + ++ +G + Q Sbjct: 615 DVHLVAQCFYAYSTDLMRKTATVLGKTDDAAHYAALLERIRKAFQQAYMTPSGRLISDTQ 674 Query: 714 APLVRTLAFGLAGEDRKQAMADRLAELVIEQDYHLNTGFLSTPFILHVLADYGYPDVAYR 773 V L F + E+ + D L + V + + HL TGFL TPF+ VL+ +G DVAY+ Sbjct: 675 TAYVLALQFDMLPENLRLQAVDHLVDNVKKYENHLTTGFLGTPFLCPVLSRFGRTDVAYK 734 Query: 774 LLEQDTCPSWLYAVAKSATTIWESWNGISPEGEL----AYSLNHYSYGAVCNFLFAGVAG 829 LL QDT PSWLY V ATTIWE W+ + P+ S NHY+YGAV ++++ + G Sbjct: 735 LLLQDTYPSWLYPVKMGATTIWERWDSMKPDSTFQSPSMTSFNHYAYGAVGDWMYRTITG 794 Query: 830 IRPVPEQAGYEHFIIKPWIGGTMTHASATHESPYGKIESGWRKTEDGVAYRFVVPANTTA 889 I + GY+H II+P GG T A A+ ++ YG + SGW++ D + VPANT+A Sbjct: 795 IDTDETKTGYKHTIIRPQPGGGFTSAEASLKTYYGTVRSGWKRASDALTMTVEVPANTSA 854 Query: 890 TVML-----EGSEEDAKRLSAD-FEQVSYKDGRVTLEVGSGSY 926 T+ + E +E K L A + G V ++VGSG Y Sbjct: 855 TIYIPAKNAEAVQEGGKPLGASGLTAAGTEPGYVQIKVGSGVY 897 >B1DK33.1 B1DK33_9BACL Alpha-L-rhamnosidase Length = 895 Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust. Identities = 387/959 (40%), Positives = 542/959 (56%), Gaps = 93/959 (9%) Query: 1 MLSTYDLKTEHLRNPLGLDNKSPRFSWKINSDARNMTQNAYQVQASAS-ETFDSI--LWD 57 +L L+ E+ +NP GL SPR SW++ SD ++ Q AYQ+Q S E FD + +WD Sbjct: 3 LLQVNHLRCEYQQNPNGLGALSPRISWQLQSDDVHVMQLAYQIQVSCGLEGFDELELVWD 62 Query: 58 SGKV-TGRAQRLEYSGPELKSAVRIFWRVKIWDNDGNESAFSEPALFEMGLLNAADWKAK 116 +G+V + ++ +EY G L + R ++RVK+WDN GNES +S+ A +EMGLL ADW A Sbjct: 63 TGRVESEQSTLIEYGGQPLHARGRYYYRVKVWDNKGNESEWSKTAHWEMGLLQTADWTAS 122 Query: 117 WIEPESEVDPDAYKPAPYIRKEFNVRSGLVSARAYMTARGLYKFYMNGTEGTDHLFTPGF 176 WI PE+ + +RK F RS + A Y TA GLY+ +NG D +TPG+ Sbjct: 123 WITPEANSINPQSEEIFMLRKSFAARSNISRATLYATALGLYEVELNGKRVGDWEYTPGW 182 Query: 177 TSYYARLQYQVYDITHLLKEGANAWGILLSDGWWRGSTGVLLKNN----FGYKVAFLGQV 232 TSY +RLQ Q YD+T L G+NA G L++GW++G L NN +G A L Q+ Sbjct: 183 TSYSSRLQVQAYDVTQQLAAGSNAIGASLANGWYKGD---LAWNNQKSIYGNIRAVLLQL 239 Query: 233 VLSYDDGSREIIASDGSFTTSSGPLLKSDLKAGEVYDARIDIEGWNTVGFNDADWTAVHV 292 + YDDG+ E+IASD S+ ++GP+L S+L GE YDAR++I+GW+ F+D W V Sbjct: 240 HIDYDDGTSEVIASDTSWRAATGPILMSELYHGETYDARLEIKGWSEPDFDDQSWAGVTE 299 Query: 293 KDYGIDHLVAS-SLPVRTREEFTP-RIIETPNGETVLDFGQNIAGWVEMKLQGDAGTEVV 350 D LV + PVR E+ P +I TP+GETVLD GQN+ G + +++ AGTE+ Sbjct: 300 LAQSKDILVMQENEPVRITEKLKPVALIHTPSGETVLDMGQNMVGRLHFRIELPAGTELS 359 Query: 351 LVHGETLDKNGNFTLSNLEHTGPLNDFQEIHYILNGRSEEVYRPYFTIFGFRYVLLKNVP 410 + H E LD+ GNF + NL Q + YI G EE Y P+F+ GFRYV ++ P Sbjct: 360 IRHAEVLDREGNFYIGNLRKAK-----QTVRYICKGGEEE-YEPHFSFQGFRYVKIEGWP 413 Query: 411 --GKPKPDHFTAFAIYSDMEEAGDFACSNPLINQLVSNSRWSMKSNFMEIPTDCPTR-ER 467 D FT +++DME +G F CS+PL+N+L N W + NF+++PTDCP R ER Sbjct: 414 QDAALNLDQFTGHVLHTDMEASGAFECSHPLLNKLQQNIIWGQRGNFLDVPTDCPQRDER 473 Query: 468 AGWTGDAQLFARTAADFMNVHAFYEKWLADLAAEQFPSGAVGSTVPQVLGFHSVDEYERV 527 GWTGDAQ+F RTAA V F+ KWL DL A+Q G V +P VL +S Sbjct: 474 LGWTGDAQVFIRTAAFNYGVAPFFAKWLRDLKADQRSDGGVPFVIPHVLDENS------- 526 Query: 528 VKNANDPLLAMLASTKPGEPGYLDGSAGWGDAAVIAPWTMYLCYGDQSILERQYDSAKAW 587 SA WGDAAVI PWTMYL YGD+ +LE QYDS KAW Sbjct: 527 -----------------------HSSAAWGDAAVICPWTMYLSYGDKRVLEEQYDSMKAW 563 Query: 588 VEYMKTNAENDSDHYKDAAYYHNDTDGEPDAKFIWDTKFHYGEWLEADIDHSPEQMGAEI 647 VEY++ ++ ++W+T FH+G+WL D + +GA Sbjct: 564 VEYIRKQGSDE---------------------YLWNTGFHFGDWLGLDAKEG-DYVGATP 601 Query: 648 QTRMFKGDPLTATAYYGYSTRLLSEMAAVLGKREDAERYAKLHEKIKRVYNKYFIPENGL 707 + L AT YY YST L + A VLG+ +DAE Y +L+ +I + + F+ NG Sbjct: 602 RD-------LIATCYYAYSTELFVKTAEVLGRTDDAEHYRELYNQIAAAFEREFLTPNGR 654 Query: 708 IQEGRQAPLVRTLAFGLAGEDRKQAMADRLAELVIEQDYHLNTGFLSTPFILHVLADYGY 767 + Q V L FGL + +A LA+ V EQ +HL TGF+ TP++ HVL++ GY Sbjct: 655 LAAHTQTAHVLPLMFGLVKGSVRDRLAKTLADYVTEQKFHLTTGFVGTPYLSHVLSENGY 714 Query: 768 PDVAYRLLEQDTCPSWLYAVAKSATTIWESWNGISPEGEL----AYSLNHYSYGAVCNFL 823 DVA +L++Q+ PSWLY++ + ATTIWE W+GI +G S NHY+YG++ +L Sbjct: 715 HDVAVKLVQQEDYPSWLYSIHQGATTIWEHWDGIKADGSFWSDDMNSYNHYAYGSIGEWL 774 Query: 824 FAGVAGIRPVPEQAGYEHFIIKPWIGGTMTHASATHESPYGKIESGWRKTEDG-VAYRFV 882 + VAG+ Q GY+H I +P +T+A A+++S YG I SGW + DG V+Y F Sbjct: 775 YRVVAGLDLDESQPGYKHIIFRPRTDSGLTYAKASYKSVYGLIRSGWNTSVDGAVSYEFE 834 Query: 883 VPANTTATVMLEGSEEDAKRLS-ADFEQVS------YKDGRVTLEVGSGSYHIKPGQPI 934 +P NTTA V L+G+ DA ++ AD S + G + L +GSG Y + + Sbjct: 835 LPPNTTAEVRLQGALPDAISVNGADLRSASGVIDFREEGGLLVLSLGSGIYRVHAAAKV 893 >C1Z071.1 C1Z071_PEDHE Alpha-L-rhamnosidase Length = 904 Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust. Identities = 372/949 (39%), Positives = 523/949 (55%), Gaps = 88/949 (9%) Query: 2 LSTYDLKTEHLRNPLGLDNKSPRFSWKINSDARNMTQNAYQVQASASE----TFDSILWD 57 L L + +NP+G D P+FSWK+++ RN+ Q AY+++ ++S+ +++W Sbjct: 22 LEVGQLTCNYKQNPIGTDVLQPQFSWKLSATERNVMQKAYELRVASSDKDLLNGKNLVWQ 81 Query: 58 SGKV-TGRAQRLEYSGPELKSAVRIFWRVKIWDNDGNESAFSEPALFEMGLLNAADWKAK 116 +GKV + ++ + Y G L++ R +W+V++WDN+G S +S +EMGLL+ DW AK Sbjct: 82 TGKVNSDQSAHVIYKGSALQAKQRYYWQVRVWDNNGKASDWSVVNFWEMGLLSPKDWSAK 141 Query: 117 WIEPESEVDPDAYKPAPYIRKEFNVRSGLVSARAYMTARGLYKFYMNGTEGTDHLFTPGF 176 WI+ + + PAP + F V + +AR Y+TA GLY+ +NG + DH FTPG+ Sbjct: 142 WIQTARDTEGKV-GPAPMFGRSFTVAKEIKNARLYITAHGLYEAKLNGKKIGDHYFTPGW 200 Query: 177 TSYYARLQYQVYDITHLLKEGANAWGILLSDGWWRGSTGVLLKNN-FGYKVAFLGQVVLS 235 TSY+ RLQYQ YD+T LK G N + + DGW+RG+ K N +G +V L Q+ + Sbjct: 201 TSYHKRLQYQTYDVTQALKAGKNTALVTIGDGWYRGNLEFNNKRNLYGKEVGLLFQLEIE 260 Query: 236 YDDGSREIIASDGSFTTS-SGPLLKSDLKAGEVYDARIDIEGWNTVGFNDADWTAVHVKD 294 Y DG +E I+SD + TS GP+ SD+ GE YDAR++ FN DW V D Sbjct: 261 YADGKKETISSDQDWKTSFGGPVKASDIYNGETYDARLEKNAL-VQDFNTGDWQQAKVVD 319 Query: 295 YGIDHLVASSLP-VRTREEFTP-RIIETPNGETVLDFGQNIAGWVEMKLQGDAGTEVVLV 352 +D+LVA P V E F P ++I+TP GE V+DFGQN+ GW ++K++G AG + + Sbjct: 320 LKMDNLVAPLGPTVSKHEHFAPLKVIKTPKGEIVIDFGQNLVGWAQLKIKGKAGDTLTIN 379 Query: 353 HGETLDKNGNFTLSNLEHTGPLNDFQEIHYILNGRSEEVYRPYFTIFGFRYVLLKNVPGK 412 H E LDK+GNF NL QE YIL+G +V P+FT GFRY+ + GK Sbjct: 380 HAEVLDKDGNFYTENLRKAK-----QENKYILSGTKVDVLEPHFTFQGFRYIKITGYKGK 434 Query: 413 PKPDHFTAFAIYSDMEEAGDFACSNPLINQLVSNSRWSMKSNFMEIPTDCPTR-ERAGWT 471 A A+YSDM+ G F+ SNPL+NQL SN +W K NF+++PTDCP R ER GWT Sbjct: 435 LDSTTVNAIAVYSDMKPTGLFSTSNPLLNQLQSNIQWGQKGNFVDVPTDCPQRDERLGWT 494 Query: 472 GDAQLFARTAADFMNVHAFYEKWLADLAAEQFPSGAVGSTVPQVLGFHSVDEYERVVKNA 531 GDAQ+F +TAA M+V F++KWL DL +Q P+G V +P V R +KNA Sbjct: 495 GDAQVFFKTAAYNMDVAGFFDKWLHDLKVDQHPTGNVPVVIPDV----------RTIKNA 544 Query: 532 NDPLLAMLASTKPGEPGYLDGSAGWGDAAVIAPWTMYLCYGDQSILERQYDSAKAWVEYM 591 GSAGWGD A I PW Y YGD+ +L RQY S KAWVEY+ Sbjct: 545 --------------------GSAGWGDVATIIPWDFYRAYGDKELLSRQYSSMKAWVEYI 584 Query: 592 KTNAENDSDHYKDAAYYHNDTDGEPDAKFIWDTKFHYGEWLEADIDHSPEQMGAEIQTRM 651 ++ ++N+ +W++ HYG+WL + + A I + Sbjct: 585 RSISKNN----------------------LWNSGPHYGDWLFYTMADDRDGKAA-ITDKF 621 Query: 652 FKGDPLTATAYYGYSTRLLSEMAAVLGKREDAERYAKLHEKIKRVYNKYFIPENGLIQEG 711 F A A+Y +ST+ L A VLG ED + Y +L + IK+ + ++ +G + Sbjct: 622 F-----IAQAFYAHSTQNLINAATVLGNTEDVKAYTELLKIIKKAFLDEYVTPSGRLVSS 676 Query: 712 RQAPLVRTLAFGLAGEDRKQAMADRLAELVIEQDYHLNTGFLSTPFILHVLADYGYPDVA 771 Q V L F L E+ + A RLA+ V HL TGFL TP++ HVL +GY DVA Sbjct: 677 SQTAYVLALNFDLLPENLRAQAAQRLADNVAAYGNHLTTGFLGTPYLCHVLTRFGYNDVA 736 Query: 772 YRLLEQDTCPSWLYAVAKSATTIWESWNGISPEGELAY----SLNHYSYGAVCNFLFAGV 827 Y+LL QDT PSWLY V K ATTIWE W+GI P+G S NHY+YGA+ ++++ V Sbjct: 737 YKLLLQDTYPSWLYPVKKGATTIWERWDGIKPDGSFQAVSMNSFNHYAYGAIGDWMYRTV 796 Query: 828 AGIRPVPEQAGYEHFIIKPWIGGTMTHASATHESPYGKIESGWRKTEDGVAYRFVVPANT 887 GI GY+ I P GG + +A A E+ YGK++S W + VVP NT Sbjct: 797 TGINETA--PGYKEISIAPKPGGDLKNAGAELETMYGKVKSAWSVADGKTKIDIVVPPNT 854 Query: 888 TATVMLEGS-------EEDAKRLSADFEQVSYKDGRVTLEVGSGSYHIK 929 TA V+L G+ A + + D L GSG+YH + Sbjct: 855 TARVILPGTGNAVVTESNVALNKAKGLRAIKNVDNNTELTAGSGTYHFE 903 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.134 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 6,211,733,836 Number of extensions: 280208009 Number of successful extensions: 586521 Number of sequences better than 1.0e-05: 297 Number of HSP's gapped: 584090 Number of HSP's successfully gapped: 511 Length of query: 939 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 794 Effective length of database: 1,694,649,028 Effective search space: 1345551328232 Effective search space used: 1345551328232 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 136 (57.0 bits)