BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0014.p (282 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q24UG9.1 Q24UG9_DESHY Putative uncharacterized protein 254 5e-66 B8FR23.1 B8FR23_DESHD Putative uncharacterized protein 251 4e-65 Q97DX6.1 Q97DX6_CLOAB Putative uncharacterized protein 225 4e-57 A6NT45.1 A6NT45_9BACE Putative uncharacterized protein 199 2e-49 C0EHT0.1 C0EHT0_9CLOT Putative uncharacterized protein 197 8e-49 >Q24UG9.1 Q24UG9_DESHY Putative uncharacterized protein Length = 270 Score = 254 bits (649), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 129/247 (52%), Positives = 153/247 (61%) Query: 1 MFKPAALAYTYDGSFEGLLCCVFESYQWKETPLAIHSDGEEQGLLLESKWIATDSSRADR 60 MF A L Y YDGSFEGL+CCVF SY+ KE PL I + GL K I TD +A R Sbjct: 1 MFDGATLVYKYDGSFEGLMCCVFASYEHKEIPLDILPPEGQPGLFDILKSIETDRQKAQR 60 Query: 61 VLKSLPLRICPEAEELVRLGFWSCTPDKEXXXXXXXXXGFTHGRKVMNMLADDTVNTLHK 120 V S+P+RI EA+ELV+LGF +CTP KE G+ G KVM ML DD V+ L K Sbjct: 61 VYDSIPVRISLEAQELVKLGFLTCTPQKERLIFLFLRLGYKLGGKVMGMLTDDNVHALQK 120 Query: 121 AVQQLRREAHLYLGFVRFSVYGPVMAAVIEPKGFVLPVIQDHFCDRYYGESFMIYDKTHR 180 AV+ L E+H Y GFVRFSVY + AVIEP+ FVLP++ HF +RY E FMI+DKTH+ Sbjct: 121 AVRNLTYESHRYKGFVRFSVYNEALVAVIEPENFVLPLLAYHFSNRYPNEVFMIFDKTHK 180 Query: 181 VALIHQPGQQAXXXXXXXXXXXXDAAEEEYRRLWKGFYNAIGIRERKNDRLRSSLMPKRY 240 ALIHQ G+ D E EYRRLW+ FY I I R N R R + MPKR+ Sbjct: 181 AALIHQAGRVEIVDVEEWELPEPDEQEVEYRRLWQQFYKTIAIESRDNPRCRMNFMPKRF 240 Query: 241 WKHLTEM 247 WKHLTE Sbjct: 241 WKHLTEF 247 >B8FR23.1 B8FR23_DESHD Putative uncharacterized protein Length = 270 Score = 251 bits (642), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 127/247 (51%), Positives = 153/247 (61%) Query: 1 MFKPAALAYTYDGSFEGLLCCVFESYQWKETPLAIHSDGEEQGLLLESKWIATDSSRADR 60 MF A L Y YDGSFEGL+CCVF SY+ KE PL I + GL K I TD +A R Sbjct: 1 MFDGATLVYKYDGSFEGLMCCVFASYEHKEIPLDILPPEGQPGLFDILKTIETDHQKAQR 60 Query: 61 VLKSLPLRICPEAEELVRLGFWSCTPDKEXXXXXXXXXGFTHGRKVMNMLADDTVNTLHK 120 V S+P+RI EA+ELV+LGF +CTP KE G+ G KVM ML DD V+ L K Sbjct: 61 VYDSIPIRISLEAQELVKLGFLTCTPQKERLIFLFLRLGYKVGGKVMGMLTDDNVHALQK 120 Query: 121 AVQQLRREAHLYLGFVRFSVYGPVMAAVIEPKGFVLPVIQDHFCDRYYGESFMIYDKTHR 180 AV+ L E+H Y GFVRFS+Y + A+IEP+ FVLP++ HF +RY E FMI+DKTH+ Sbjct: 121 AVRNLTCESHRYKGFVRFSIYNEALVAMIEPENFVLPLLAYHFSNRYPNEVFMIFDKTHK 180 Query: 181 VALIHQPGQQAXXXXXXXXXXXXDAAEEEYRRLWKGFYNAIGIRERKNDRLRSSLMPKRY 240 ALIHQ G+ D E EYRRLW+ FY I I R N R R + MPKR+ Sbjct: 181 AALIHQAGRVEILDIEDWELPEPDEEEVEYRRLWQQFYKTIAIESRDNPRCRMNFMPKRF 240 Query: 241 WKHLTEM 247 WKHLTE Sbjct: 241 WKHLTEF 247 >Q97DX6.1 Q97DX6_CLOAB Putative uncharacterized protein Length = 254 Score = 225 bits (573), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 106/242 (43%), Positives = 151/242 (62%) Query: 5 AALAYTYDGSFEGLLCCVFESYQWKETPLAIHSDGEEQGLLLESKWIATDSSRADRVLKS 64 + L Y YDGSFEGL+CCVFESY+ E P+ I Q L +K +ATD ++A RV+KS Sbjct: 5 SNLIYYYDGSFEGLMCCVFESYEKNEIPVNILVTNNAQMTLFMAKEVATDLAKASRVIKS 64 Query: 65 LPLRICPEAEELVRLGFWSCTPDKEXXXXXXXXXGFTHGRKVMNMLADDTVNTLHKAVQQ 124 +PL++ A + ++ F +C DKE G+T+G KVMNML++D V+ L KAV Sbjct: 65 IPLKMGVNAFDFIKRVFLTCLEDKELNLLLFMRLGYTYGPKVMNMLSNDIVHILFKAVTH 124 Query: 125 LRREAHLYLGFVRFSVYGPVMAAVIEPKGFVLPVIQDHFCDRYYGESFMIYDKTHRVALI 184 L +E+HL+ GF+RFS + + A IEPK F+LP++ HFC RY E F+I+DKTH +ALI Sbjct: 125 LNKESHLFKGFIRFSAFKDGLVAQIEPKNFILPLLSSHFCSRYPEEHFLIHDKTHDMALI 184 Query: 185 HQPGQQAXXXXXXXXXXXXDAAEEEYRRLWKGFYNAIGIRERKNDRLRSSLMPKRYWKHL 244 ++P + + E+ +R+LW +Y + I R N + R + MPKRYWK+L Sbjct: 185 YKPHKASIIPVEDMRLPDVTEEEKHFRKLWSLYYRTVEIEGRHNPKCRRTNMPKRYWKYL 244 Query: 245 TE 246 TE Sbjct: 245 TE 246 >A6NT45.1 A6NT45_9BACE Putative uncharacterized protein Length = 270 Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust. Identities = 106/256 (41%), Positives = 143/256 (55%) Query: 7 LAYTYDGSFEGLLCCVFESYQWKETPLAIHSDGEEQGLLLESKWIATDSSRADRVLKSLP 66 +AYTYDG+F+G L CV+ESY +E A + G+ Q L + + T A RV +SLP Sbjct: 12 VAYTYDGTFDGFLTCVYESYLHRERAAAFSAPGQAQLSLYPERPVDTHPDHARRVRQSLP 71 Query: 67 LRICPEAEELVRLGFWSCTPDKEXXXXXXXXXGFTHGRKVMNMLADDTVNTLHKAVQQLR 126 R+ P+ LV GF + PD+E GF G V++ L D V TL +AV+ L Sbjct: 72 RRLSPQGARLVVYGFLTALPDREQSLYDFLALGFQRGPSVLHDLTDQRVFTLDRAVRYLT 131 Query: 127 REAHLYLGFVRFSVYGPVMAAVIEPKGFVLPVIQDHFCDRYYGESFMIYDKTHRVALIHQ 186 EAHL GF+RFS V+ A IEP+ VLP+++ HFC RY E+F+IYD+THR AL ++ Sbjct: 132 GEAHLLKGFIRFSDRDGVLTAEIEPRNRVLPLLRPHFCARYPSEAFVIYDRTHREALFYR 191 Query: 187 PGQQAXXXXXXXXXXXXDAAEEEYRRLWKGFYNAIGIRERKNDRLRSSLMPKRYWKHLTE 246 PGQ A D E ++R LW+ FY + I R N R R S MPKRYW +TE Sbjct: 192 PGQWAIVPLEDFRVAGPDRDERDWRALWRQFYRTVSIEGRYNPRCRMSHMPKRYWGCMTE 251 Query: 247 MKGSTTAANGSKPTGS 262 + + P G+ Sbjct: 252 FQTDPPEDATALPGGT 267 >C0EHT0.1 C0EHT0_9CLOT Putative uncharacterized protein Length = 266 Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 106/260 (40%), Positives = 150/260 (57%), Gaps = 3/260 (1%) Query: 5 AALAYTYDGSFEGLLCCVFESYQWKETPLAIHSDGEEQGLLLESKWIATDSSRADRVLKS 64 ++ Y YDGSF+GL+CC+ ES + E P I +DG Q L ++ I TD S A +V++ Sbjct: 5 TSVIYLYDGSFDGLMCCIAESCRQHELPTDILADGCPQLTLHPTRRIPTDRSDARKVVEI 64 Query: 65 LPLRICPEAEELVRLGFWSCTPDKEXXXXXXXXXGFTHGRKVMNMLADDTVNTLHKAVQQ 124 + RI P A + V++ + + KE G+ +G++V +M AD+TV TL KAVQ Sbjct: 65 MQNRISPAAVKFVKMAYLTYI-SKELPILQFFRLGYRYGKRVFDMHADETVCTLRKAVQH 123 Query: 125 LRREAHLYLGFVRFSVYGPVMAAVIEPKGFVLPVIQDHFCDRYYGESFMIYDKTHRVALI 184 LR E+H + FVRF+ Y + A IEPK VLP+I HF +R E ++IYDKT+R+AL+ Sbjct: 124 LRNESHRFKQFVRFTEYDGKLIARIEPKNCVLPMIAPHFAERLPNEQYLIYDKTNRLALV 183 Query: 185 HQPGQQAXXXXXXXXXXXXDAAEEEYRRLWKGFYNAIGIRERKNDRLRSSLMPKRYWKHL 244 HQPG A AE E+R LWK +Y+ IGI R N + R ++MPKRYW + Sbjct: 184 HQPGHSAILPLDSFEPDLPGEAEREFRCLWKLYYDTIGIEGRYNPKCRMTMMPKRYWTEM 243 Query: 245 TEM--KGSTTAANGSKPTGS 262 E + T +G P S Sbjct: 244 PEFDSENDTRPESGQLPPPS 263 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.135 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,648,455,323 Number of extensions: 61385716 Number of successful extensions: 111940 Number of sequences better than 1.0e-05: 134 Number of HSP's gapped: 111655 Number of HSP's successfully gapped: 134 Length of query: 282 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 148 Effective length of database: 1,798,280,193 Effective search space: 266145468564 Effective search space used: 266145468564 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)