BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0013.p (268 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein 191 8e-47 B8FR56.1 B8FR56_DESHD Putative uncharacterized protein 191 8e-47 B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein 185 4e-45 Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein 184 7e-45 B1BVT8.1 B1BVT8_CLOPE Putative uncharacterized protein 182 2e-44 >Q24RR6.1 Q24RR6_DESHY Putative uncharacterized protein Length = 308 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 113/268 (42%), Positives = 157/268 (58%), Gaps = 21/268 (7%) Query: 2 LYKIGVMTVELLDARNDFIFKRIFGSENNKDVLLAFLNSTFMEAGESPLTEITIMNPYTD 61 + K G E + + D+ FK IFG E N+ +L+AFLN+ E + ITIMNP + Sbjct: 1 MRKAGESMKEFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEAITIMNPELN 60 Query: 62 KDTPAEKQSILDIKAKTAEGKRINIEMQLFNPYNMEKRTLFYWSEMYYHQIQKGDNYSQL 121 K+ +K+SILD++A+T+EG +INIE+QL N Y+MEKR+L+YW+EMY QI++G Y +L Sbjct: 61 KEYQGDKKSILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQIREGMAYKEL 120 Query: 122 KKCVTINILNYSCLPN-DRYHNVFHLREDQTGISLIDDLEIHVMELTKL-----EEQAVP 175 K VTINIL+++ L YHNVFHL ED+ L D LE+H MEL KL + P Sbjct: 121 AKAVTINILDFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLAKWRNREISP 180 Query: 176 VAGGLVNWLLFLKGVEQPNWEVL------TLNEPMLKKAMDTLEFLSQDAATRMEYEARM 229 LV WLL L+G + N E+L + +P+L +AM E S D R Y R Sbjct: 181 WENELVRWLLLLEGAD--NQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRIREAYFDRR 238 Query: 230 KYLRDEVS-------RMEGAKSEGRAEG 250 K + DE + R++ A +GRA G Sbjct: 239 KAVLDEKAAIREAELRLKEALEKGRAAG 266 >B8FR56.1 B8FR56_DESHD Putative uncharacterized protein Length = 308 Score = 191 bits (484), Expect = 8e-47, Method: Compositional matrix adjust. Identities = 113/268 (42%), Positives = 157/268 (58%), Gaps = 21/268 (7%) Query: 2 LYKIGVMTVELLDARNDFIFKRIFGSENNKDVLLAFLNSTFMEAGESPLTEITIMNPYTD 61 + K G E + + D+ FK IFG E N+ +L+AFLN+ E + ITIMNP + Sbjct: 1 MRKAGESMKEFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEAITIMNPELN 60 Query: 62 KDTPAEKQSILDIKAKTAEGKRINIEMQLFNPYNMEKRTLFYWSEMYYHQIQKGDNYSQL 121 K+ +K+SILD++A+T+EG +INIE+QL N Y+MEKR+L+YW+EMY QI++G Y +L Sbjct: 61 KEYQGDKKSILDVRAETSEGMQINIEIQLSNQYDMEKRSLYYWAEMYSRQIREGMAYKEL 120 Query: 122 KKCVTINILNYSCLPN-DRYHNVFHLREDQTGISLIDDLEIHVMELTKL-----EEQAVP 175 K VTINIL+++ L YHNVFHL ED+ L D LE+H MEL KL + P Sbjct: 121 AKAVTINILDFNYLKQTSNYHNVFHLYEDEEKFQLTDALEMHFMELPKLLAKWRNREISP 180 Query: 176 VAGGLVNWLLFLKGVEQPNWEVL------TLNEPMLKKAMDTLEFLSQDAATRMEYEARM 229 LV WLL L+G + N E+L + +P+L +AM E S D R Y R Sbjct: 181 WENELVRWLLLLEGAD--NQEILQTLEEIAMKDPVLHQAMTAWEETSDDPRIREAYFDRR 238 Query: 230 KYLRDEVS-------RMEGAKSEGRAEG 250 K + DE + R++ A +GRA G Sbjct: 239 KAVLDEKAAIREAELRLKEALEKGRAAG 266 >B8FTH9.1 B8FTH9_DESHD Putative uncharacterized protein Length = 325 Score = 185 bits (470), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 108/259 (41%), Positives = 157/259 (60%), Gaps = 21/259 (8%) Query: 11 ELLDARNDFIFKRIFGSENNKDVLLAFLNSTFMEAGESPLTEITIMNPYTDKDTPAEKQS 70 E + + D+ FK IFG E N+ +L+AFLN+ E + EITI+NP +K+ P +K+S Sbjct: 3 EFISLKIDYAFKLIFGKEGNEAILIAFLNAALKLPQERRIEEITIINPELNKEYPEDKKS 62 Query: 71 ILDIKAKTAEGKRINIEMQLFNPYNMEKRTLFYWSEMYYHQIQKGDNYSQLKKCVTINIL 130 ILD++A T++G +INIE+QL N Y+MEKR+L+YW++MY QI++G Y +L K V+INI+ Sbjct: 63 ILDVRAITSQGMQINIEIQLSNQYDMEKRSLYYWAQMYSRQIREGMAYKELTKTVSINIV 122 Query: 131 NYSCLPN-DRYHNVFHLREDQTGISLIDDLEIHVMELTKL-----EEQAVPVAGGLVNWL 184 +++ L YHNVFHL ED+ L D LEIH MEL KL + + LV WL Sbjct: 123 DFNYLKQTSSYHNVFHLYEDEEKFQLTDVLEIHFMELPKLLAKWRKREISLWENELVRWL 182 Query: 185 LFLKGVEQPNWEVL------TLNEPMLKKAMDTLEFLSQDAATRMEYEARMKYLRDEVS- 237 L L+G + N E+L + +P+L +AM+ E S+D R Y R K + DE + Sbjct: 183 LLLEGAD--NQEILQILEEIAMKDPVLYQAMNAWEETSEDPRIREAYFDRRKAILDEKAA 240 Query: 238 ------RMEGAKSEGRAEG 250 R++ A EG A+G Sbjct: 241 IREAELRLQEALEEGMAKG 259 >Q24PT3.1 Q24PT3_DESHY Putative uncharacterized protein Length = 288 Score = 184 bits (467), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 101/240 (42%), Positives = 147/240 (61%), Gaps = 3/240 (1%) Query: 13 LDARNDFIFKRIFGSENNKDVLLAFLNSTFMEAGESPLTEITIMNPYTDKDTPAEKQSIL 72 L+ ND++FK +FG NK++LL+FLNS G+ L +IT+ D + +K S L Sbjct: 5 LNRINDYLFKWVFGRPENKEILLSFLNSVLSPNGQDELADITLAERELDPEHIHDKLSRL 64 Query: 73 DIKAKTAEGKRINIEMQLFNPYNMEKRTLFYWSEMYYHQIQKGDNYSQLKKCVTINILNY 132 DI K +G INIE+Q+ N Y+++KRTL+YW+++Y Q+QKG Y L + +T+N+LN+ Sbjct: 65 DILGKGNDGSIINIEVQIANQYDIDKRTLYYWAKLYQGQLQKGQRYKDLSRTITVNVLNF 124 Query: 133 SCLPND-RYHNVFHLREDQTGISLIDDLEIHVMELTKLEEQAVPVAGGLVNWLLFLKGVE 191 LP+ +YH++F L E +G L DLEIH +EL+K + +V L WL++L Sbjct: 125 GFLPDSQKYHSMFSLYEAHSGYRLNRDLEIHFLELSKWKALSVKPKTRLDKWLMYLSNTN 184 Query: 192 QPNWEVLTLNEPMLKKAMDTLE-FLSQDAATRMEYEARMKYLRDEVSRMEGAKSEGRAEG 250 E + ++EP ++KA+ E FL QD R YE R K L D VS +EGAK EG AEG Sbjct: 185 PQEMEEIAMSEPAIRKALTAEEIFLKQD-KERYLYEMREKALLDHVSAIEGAKEEGVAEG 243 >B1BVT8.1 B1BVT8_CLOPE Putative uncharacterized protein Length = 298 Score = 182 bits (463), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 104/247 (42%), Positives = 146/247 (59%), Gaps = 9/247 (3%) Query: 12 LLDARNDFIFKRIFGSENNKDVLLAFLNSTFMEAGESPLTEITIMNPYTDKDTPAEKQSI 71 LL+ + DF+FK+IFG+E NK +L+ FLN+ +P+ ++ I N DKD +K S Sbjct: 6 LLNPQIDFVFKKIFGTEKNKPILINFLNAVIKPT--TPIKDVEIKNNDIDKDFIEDKFSR 63 Query: 72 LDIKAKTAEGKRINIEMQLFNPYNMEKRTLFYWSEMYYHQIQKGDNYSQLKKCVTINILN 131 LD+KA T+ + INIE+Q+ N YNM +RTL+YWS+MY QIQ DNYS+L++ V INILN Sbjct: 64 LDVKATTSNKEHINIEIQVKNEYNMIQRTLYYWSKMYSEQIQNRDNYSKLERTVCINILN 123 Query: 132 YSCLPNDRYHNVFHLREDQTGISLIDDLEIHVMELTKLEE-------QAVPVAGGLVNWL 184 + L ND+YHN + L+E + L D EIH +EL K E + V L WL Sbjct: 124 FKYLKNDKYHNAYRLKEITSNEELTDLQEIHFIELPKFNEIGNKEYVEKVEKMDALEKWL 183 Query: 185 LFLKGVEQPNWEVLTLNEPMLKKAMDTLEFLSQDAATRMEYEARMKYLRDEVSRMEGAKS 244 FL E L L+ +K A L LS D+ R +Y R K + D +S +E A++ Sbjct: 184 EFLIEPESNTVRQLELSNEEIKLAKSELYRLSMDSKEREQYNMREKAIYDRISALENAEA 243 Query: 245 EGRAEGR 251 +G+ EGR Sbjct: 244 KGKREGR 250 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.135 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,537,650,582 Number of extensions: 62033431 Number of successful extensions: 144091 Number of sequences better than 1.0e-05: 530 Number of HSP's gapped: 143485 Number of HSP's successfully gapped: 530 Length of query: 268 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 135 Effective length of database: 1,807,701,208 Effective search space: 244039663080 Effective search space used: 244039663080 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)