BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0249.0010.p (450 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K3A6.1 B3K3A6_9BACI Extracellular solute-binding protein family 1 731 0.0 B1D7W5.1 B1D7W5_9BACL Extracellular solute-binding protein family 1 446 e-123 C5C6L2.1 C5C6L2_9MICO Extracellular solute-binding protein family 1 192 4e-47 C5BWC8.1 C5BWC8_9MICO Extracellular solute-binding protein family 1 186 3e-45 B1DBI0.1 B1DBI0_9BACL Extracellular solute-binding protein family 1 172 6e-41 >B3K3A6.1 B3K3A6_9BACI Extracellular solute-binding protein family 1 Length = 443 Score = 731 bits (1886), Expect = 0.0, Method: Compositional matrix adjust. Identities = 347/400 (86%), Positives = 374/400 (93%) Query: 51 SSKGTVTLKMWGGVPPESGPQEVIDNWNKAHPETQVEYVRFVNDDDGNLKLDTAMVTGQD 110 SS V L MWGGVPPE+GPQEVID WN HP+ QVEYVR+VNDDDGNLKLDTAM+TGQD Sbjct: 44 SSGDPVKLTMWGGVPPEAGPQEVIDAWNAEHPDIQVEYVRYVNDDDGNLKLDTAMITGQD 103 Query: 111 VDLFVNYTVSHAAKRVESNLALDLSSFTDYNIDEKMGSDAEGWKINGKYYGVPTTKSAFF 170 VDLFVNYT+S +KRVESNLALDLS F DYNIDEKMG DAEGWKINGKYYG+PTTKSAFF Sbjct: 104 VDLFVNYTLSQTSKRVESNLALDLSQFDDYNIDEKMGPDAEGWKINGKYYGMPTTKSAFF 163 Query: 171 IALNKDALDAAGLPVPKDWTWDELREYAKKLKVGDKYGFIQNMEPFVDPIDSVLSQEGYT 230 +ALNKDALDAAGLPVPKDWTWDELREYAKKLKVG+ YGFIQNMEPFVDPIDSVLSQEGYT Sbjct: 164 VALNKDALDAAGLPVPKDWTWDELREYAKKLKVGNNYGFIQNMEPFVDPIDSVLSQEGYT 223 Query: 231 KADGTSNLDHPLVRKWLETLNGMMQEDKTTPPLGEQLTSKMPVEQVFLSGEVPMLNIGAW 290 KADGTSNLDHPLV+KWLETLN MM++DKTTPPLGEQLTSKMPVEQVFLSGEVPMLNIGAW Sbjct: 224 KADGTSNLDHPLVKKWLETLNVMMKDDKTTPPLGEQLTSKMPVEQVFLSGEVPMLNIGAW 283 Query: 291 LLRSSNNFTDFPRDFKIAFAQVPRLADSADQYVTRGGLGDYISINANSKKQEAAWEFLKW 350 LLRSSNNFTDFPRDF IAFAQVPRL DSAD YVTRGGLGDYISINA SKKQ AWEFLKW Sbjct: 284 LLRSSNNFTDFPRDFTIAFAQVPRLTDSADSYVTRGGLGDYISINAKSKKQAEAWEFLKW 343 Query: 351 YSDGGMAPMAAGGRLPASKDANQDDALNSLLGDKRDTYDLDSLMYVMFDDKTPTYVRSLP 410 Y+DGGMAPMAAGGRLPASKDA+Q++ALN+LLGDK+DTYDLDSLM+VMF+DKTPTYVRSLP Sbjct: 344 YADGGMAPMAAGGRLPASKDADQEEALNNLLGDKKDTYDLDSLMHVMFEDKTPTYVRSLP 403 Query: 411 QEVMDLRSQEYEKYFLGSQSLNQTIDAMVARHNNFLKQKK 450 QEVMD+R+QEYEKYFL +QSL+QT++AMV RHN FLK+ K Sbjct: 404 QEVMDMRAQEYEKYFLNAQSLDQTLEAMVNRHNTFLKEGK 443 >B1D7W5.1 B1D7W5_9BACL Extracellular solute-binding protein family 1 Length = 443 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 214/400 (53%), Positives = 285/400 (71%), Gaps = 2/400 (0%) Query: 49 SGSSKGTVTLKMWGGVPPESGPQEVIDNWNKAHPETQVEYVRFVNDDDGNLKLDTAMVTG 108 +G V L +WG VP E+GPQ VIDNWNK +P+ QVEY+R+VNDD GNLKLDTA++TG Sbjct: 45 AGKPGEKVKLTLWGAVPAEAGPQAVIDNWNKENPDIQVEYIRYVNDDPGNLKLDTALMTG 104 Query: 109 QDVDLFVNYTVSHAAKRVESNLALDLSSFTDYNIDEKMGSDAEGWKINGKYYGVPTTKSA 168 QD DL++NYT++ KRV++ +ALDLS TDYNID++MG DA WKI KYYG+PT K+ Sbjct: 105 QDADLYINYTLTRLQKRVDAGVALDLSGKTDYNIDDQMGQDAAQWKIGDKYYGIPTKKNM 164 Query: 169 FFIALNKDALDAAGLPVPK-DWTWDELREYAKKLKVGDKYGFIQNMEPFVDPIDSVLSQE 227 FI LNKD LDAAGLP+P DWTWD+LREYA KLK YG +Q+ F ID ++ Sbjct: 165 LFIWLNKDMLDAAGLPIPSVDWTWDDLREYASKLKKDKVYGLLQHDAAFTATIDGTIAGL 224 Query: 228 GYTKADGTSNLDHPLVRKWLETLNGMMQEDKTTPPLGEQLTSKMPVEQVFLSGEVPMLNI 287 G TK DGTSN D+ L +K L+T++ MM DK+TP GEQ+TSKMPV+ +FL GE ML+ Sbjct: 225 GVTKPDGTSNFDNDLWKKQLQTVHDMMFVDKSTPEYGEQVTSKMPVDTMFLKGEAAMLSA 284 Query: 288 GAWLLRSSNNFTDFPRDFKIAFAQVPRLADSADQYVTRGGLGDYISINANSKKQEAAWEF 347 G ++ R++N+ T+FP DFKIAFA +P++ Y GGLGD +S+NA SK Q+AAW+F Sbjct: 285 GEFIFRNANDLTNFPHDFKIAFATIPKVTADQKDYKYPGGLGDVLSVNAKSKHQDAAWKF 344 Query: 348 LKWYSDGGMAPMAAGGRLPASKDANQDDALNSLLGDKRDTYDLDSLMYVMFDDKTPTYVR 407 KWY+DGGM PMA+GGR+P+SK + A++ LL D YD +S+ V+F + P++ Sbjct: 345 AKWYADGGMLPMASGGRIPSSKSVDNKQAMDLLLKGVEDKYDTESMNKVVF-GQFPSFQL 403 Query: 408 SLPQEVMDLRSQEYEKYFLGSQSLNQTIDAMVARHNNFLK 447 S+PQ+ +D R +EYEK+FL Q L+ T+ M RH ++K Sbjct: 404 SVPQQALDARKEEYEKFFLNEQDLDTTLKNMAKRHQEYIK 443 >C5C6L2.1 C5C6L2_9MICO Extracellular solute-binding protein family 1 Length = 454 Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust. Identities = 130/400 (32%), Positives = 210/400 (52%), Gaps = 32/400 (8%) Query: 58 LKMWGGVPPESGPQEVIDNWNKAHPETQVEYVRFVNDDDGNLKLDTAMVTGQDVDLFVNY 117 L +WGGV PE+GPQ ++D + +P+ +VEY R+VND++G LKLDTA+ G +D++ +Y Sbjct: 55 LVVWGGVAPETGPQALVDAFMAKYPDIEVEYTRYVNDEEGILKLDTALQGGVPIDVYFSY 114 Query: 118 TVSHAAKRVESNLALDLSSFTD-------YNIDEKMGSDAEGWKINGKYYGVPTTKSAFF 170 +R ++ LALDL+ + DE + + ++GK + +PTT F Sbjct: 115 GTVDVVRRSQAALALDLTDLAREDDLAQIFVQDEPIST-----LVDGKLFSIPTTHFPNF 169 Query: 171 IALNKDALDAAGLPVPKDWTWDELREYAKKLKVGDKYGFIQNMEPFVDPIDSVLSQEG-- 228 + +N+DA++AAG+ +P DWT D+ + A++ GF ++ + P + G Sbjct: 170 VVINQDAMEAAGIEIPFDWTVDDYHQIAQEFASA---GF--DVGAYNVPRHEAVGLGGDY 224 Query: 229 -YTKADGTSNLDHPLVRKWLETLNGMMQEDKTTPPLGEQLTSKMP---VEQVFLSGEVPM 284 YT+ SNLDHPLVR+ LE M ED + E++T++ + FL G M Sbjct: 225 LYTEDGTESNLDHPLVRERLEATLAM--EDDGSIFTQERITAEGIGGYAQNYFLDGTFAM 282 Query: 285 LNIGAWLLRSSNNFTDFPRDFKIAFAQVPRLADSADQYVTRGGLGDYISINANSKKQEAA 344 + G + R N ++P DF+ F PRLA + + Y+ G GD + I+A SK AA Sbjct: 283 MLDGTIIARYVKNLEEYPHDFRTTFRPYPRLA-AGEPYINPGVRGDDVQISAKSKYASAA 341 Query: 345 WEFLK-WYSDGGMAPMAAGGRLPASKDANQDDALN-SLLG-DKRDTYDLDSLMYVMFDDK 401 W F+K W +G +G P + D+LN +L G D + +D++S F + Sbjct: 342 WTFVKFWMGEGAELVTPSGKVSPFQYEDGPSDSLNEALFGPDADELFDVESFEQTFFAAE 401 Query: 402 TPTYVRSLP---QEVMDLRSQEYEKYFLGSQSLNQTIDAM 438 P VRS+ E+ ++SQ E+ L ++S++ I M Sbjct: 402 PPLAVRSITTAFTEISSIKSQIEEEIRLRTKSIDDGIAEM 441 >C5BWC8.1 C5BWC8_9MICO Extracellular solute-binding protein family 1 Length = 445 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 133/404 (32%), Positives = 209/404 (51%), Gaps = 22/404 (5%) Query: 48 ASGSSKGTV---TLKMWGGVPPESGPQEVIDNWNKAHPETQVEYVRFVNDDDGNLKLDTA 104 SG GT TL +WGGVPPESGP ++D +++AHPE V Y RFVNDD GNLKLDTA Sbjct: 36 CSGGGGGTTPQNTLNVWGGVPPESGPGALVDAFHEAHPEYTVNYTRFVNDDRGNLKLDTA 95 Query: 105 MVTGQDVDLFVNYTVSHAAKRVESNLALDLSSFT--DYNIDEKMGSDA-EGWKINGKYYG 161 + G D+D++ Y + A R S + LDL+ D + E + ++A +G+ + + Sbjct: 96 LQGGVDIDVYFTYATGNLALRAGSGMTLDLTDRVEADPELAEFLDTEAPKGFWQDDRLTA 155 Query: 162 VPTTKSAFFIALNKDALDAAGLPVPKDWTWDELREYAKKLKVGDKYGFIQNMEPFVDPID 221 + TT+ I +N L+AAG+ +P+ WT DE A +L YG M P D Sbjct: 156 LATTREPNMILVNLARLEAAGIELPQAWTLDEFVAAAAELTGDGTYG--AYMLP--DTAR 211 Query: 222 SVLSQEGYTKADGTSNLDHPLVRKWLETLNGMMQEDKTTPPLGEQLTSKMPVEQ--VFLS 279 L + DG SN P + + L+ + +D P E L ++ Q F++ Sbjct: 212 VSLGPNYWYTDDGGSNFADPAFGEHM-ALSRDLIDDGVLYPWTEILARQLEAYQQNAFVA 270 Query: 280 GEVPMLNIGAWLLRSSNNFTDFPRDFKIAFAQVPRLADSADQYVTRGGLGDYISINANSK 339 + + + LR + ++P DFK+A A +P A G G++I +N S Sbjct: 271 EDFALWMTAPFSLRFLADAENYPHDFKVAAAPIPTTDVGA---WNTGVFGNHIMVNPRSS 327 Query: 340 KQEAAWEFLKWYSDGGMAPMAAGGRLPASKDANQDDALNSLLG-DKRDTYDLDSLMYVMF 398 KQ+ AWEF++++ G MA GG++P ++ +D L SLLG D D +D+DS V+F Sbjct: 328 KQDLAWEFVRFWILSGSEFMAPGGKIPTLQNVGTEDMLGSLLGPDAADWFDVDSFRRVLF 387 Query: 399 DDKTPTYV----RSLPQEVMDLRSQEYEKYFLGSQSLNQTIDAM 438 DD +V + P+ + +R Q+ + ++G ++ +DA+ Sbjct: 388 DDDPELFVDTNLTAFPEIDLAVR-QQRDLCWIGERAPVDAVDAI 430 >B1DBI0.1 B1DBI0_9BACL Extracellular solute-binding protein family 1 Length = 474 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 137/478 (28%), Positives = 226/478 (47%), Gaps = 39/478 (8%) Query: 6 KKTWLAGMTSLVLLTGLLXXXXXXXXXXXX-----XXXXXXXXXXTNASGSSKGT---VT 57 KK W +G+ +LLTG+L +NA G+S + V Sbjct: 2 KKRWASGLAISLLLTGVLAGCGNSNNNNSDSGNKNASAAPSTEASSNAGGNSAASGDPVK 61 Query: 58 LKMWG-GVPPESGPQEVIDNWNKAHPETQVEYVRFVNDDDGN---LKLDTAMVTGQDVDL 113 L+++ G + +D +++ +P VE V+ D KLD A+ +G+ +D+ Sbjct: 62 LRLYTYGTEQAYNWKATLDAYHEKNPNVTVELVQLSEKGDTQESMKKLDLAVASGEQIDV 121 Query: 114 FVNYTVSHAAKRVESNLALDLSSFT---DYNIDEKMGSDAEGWKINGKYYGVPTTKSAFF 170 + + A+RV +A L F Y ++E D +NGK Y +P + ++ Sbjct: 122 MMFSDAAGYAQRVALGMAAPLDDFLAKDGYKVEEDYKVDTH---LNGKVYSLPGKFNPWY 178 Query: 171 IALNKDALDAAGLPVPKDWTWDELREYAKKLKVGD----KYGFI----QN---MEPFVDP 219 + LNKD LD AGL VP DWTWDE +YAKKL G+ +YG QN ME Sbjct: 179 VLLNKDNLDEAGLAVPTDWTWDEYADYAKKLTKGEGATKRYGTYFHGPQNGGWMEYLKLM 238 Query: 220 IDSVLSQEGYTKADGTSNLDHPLVRKWLETLNGMMQEDKTTPPLGEQLTSKMPVEQVFLS 279 +++ + + KADGTSNLD P +K LE M +EDK++ P + ++ K+ F + Sbjct: 239 MENQPTGSEFLKADGTSNLDDPNFKKTLELRVKMEKEDKSSVPYSDMISQKLAYRNQFFN 298 Query: 280 GEVPMLNIGAWLLRSSNNFTDFPRDFKIAFAQVPRLADSADQYVTRGGLGDYISINANSK 339 ML IG+W+ P F +A A P+ ++ DQ DY++++ +SK Sbjct: 299 QSASMLTIGSWMNTEIGGTDTLPLTFHVAVAPFPK-NNAGDQSGITPVTTDYVAVSESSK 357 Query: 340 KQEAAWEFLKWYSDGGMAPMAAGGRLPASKDANQDDA---LNSLLGDKR--DTYDLDSLM 394 K+E A++F++WY+ G + G +PA + D ++++L + + D DSL+ Sbjct: 358 KKEEAYKFVRWYTTEGQ--VVQGKNIPAWNGVSNDQVAGIIDTILAGTKNPELVDKDSLV 415 Query: 395 YVMFDDKTPTYV--RSLPQEVMDLRSQEYEKYFLGSQSLNQTIDAMVARHNNFLKQKK 450 + + K + S EV ++EYEK LG+Q ++ T+ R + + K Sbjct: 416 NTLVNSKATEIIAPASYQAEVYKAINEEYEKLILGNQDVDTTVANSKKRVDEIIAANK 473 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,697,759,441 Number of extensions: 114573367 Number of successful extensions: 208891 Number of sequences better than 1.0e-05: 360 Number of HSP's gapped: 208960 Number of HSP's successfully gapped: 360 Length of query: 450 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 311 Effective length of database: 1,751,175,118 Effective search space: 544615461698 Effective search space used: 544615461698 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 133 (55.8 bits)