BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0236.0026.p
         (134 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

O31822.1 O31822_BACSU Putative UTP-sugar-phosphate uridylyltrans...   177   2e-43
Q2BAX8.1 Q2BAX8_9BACI UDP-glucose pyrophosphorylase                   177   4e-43
B0KAR7.1 B0KAR7_THEP3 UTP-glucose-1-phosphate uridylyltransferase     176   7e-43
B0K4N3.1 B0K4N3_THEPX UTP-glucose-1-phosphate uridylyltransferas...   176   7e-43
C4ID98.1 C4ID98_CLOBU UTP-glucose-1-phosphate uridylyltransferas...   175   1e-42

>O31822.1 O31822_BACSU Putative UTP-sugar-phosphate uridylyltransferase
           EC=2.7.7.-
          Length = 297

 Score =  177 bits (450), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 86/120 (71%), Positives = 94/120 (78%)

Query: 2   KIRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAVRSGIESIIIVTGRNKK 61
           K+RKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEA  SGIE I+I+TGRNK+
Sbjct: 4   KVRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAAESGIEDILIITGRNKR 63

Query: 62  SIEDHFDKSVXXXXXXXXXXXXXXXXXVQAISGLAGIHYIRQKEPLGLGHAISCAEQFIG 121
           SIEDHFD+S                  +Q I+ LA IHYIRQKEPLGLGHA+ CAE FIG
Sbjct: 64  SIEDHFDRSAELEFNLREKGKTETLKEMQQIADLANIHYIRQKEPLGLGHAVLCAEHFIG 123


>Q2BAX8.1 Q2BAX8_9BACI UDP-glucose pyrophosphorylase
          Length = 293

 Score =  177 bits (448), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 85/120 (70%), Positives = 95/120 (79%)

Query: 3   IRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAVRSGIESIIIVTGRNKKS 62
           IRKAVIPAAGLGTRFLPATKAQPKEMLP+ DKPAIQYIVEEA+ SGIE III+TGRNK++
Sbjct: 2   IRKAVIPAAGLGTRFLPATKAQPKEMLPVADKPAIQYIVEEAILSGIEDIIIITGRNKRA 61

Query: 63  IEDHFDKSVXXXXXXXXXXXXXXXXXVQAISGLAGIHYIRQKEPLGLGHAISCAEQFIGG 122
           IEDHFDKS+                 V+A S LA IHY+RQKEPLGLGHA+ CA+QFIG 
Sbjct: 62  IEDHFDKSIELELILKKTGKTELLEKVEAASNLASIHYVRQKEPLGLGHAVLCAKQFIGN 121


>B0KAR7.1 B0KAR7_THEP3 UTP-glucose-1-phosphate uridylyltransferase
          Length = 302

 Score =  176 bits (445), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 95/122 (77%)

Query: 1   VKIRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAVRSGIESIIIVTGRNK 60
           +KIRKA+IPAAGLGTRFLPATKAQPKEMLPIVDKP IQYIVEEA++SGIE I+I+TGRNK
Sbjct: 1   MKIRKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIVEEAIQSGIEDILIITGRNK 60

Query: 61  KSIEDHFDKSVXXXXXXXXXXXXXXXXXVQAISGLAGIHYIRQKEPLGLGHAISCAEQFI 120
           ++IEDHFDKSV                 V+ IS +  IHYIRQKEP GLGHAI CA+ F+
Sbjct: 61  RAIEDHFDKSVELELELKKKNKESLLNLVEDISNMVNIHYIRQKEPKGLGHAIYCAKSFV 120

Query: 121 GG 122
           G 
Sbjct: 121 GN 122


>B0K4N3.1 B0K4N3_THEPX UTP-glucose-1-phosphate uridylyltransferase GalU
          Length = 302

 Score =  176 bits (445), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 83/122 (68%), Positives = 95/122 (77%)

Query: 1   VKIRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAVRSGIESIIIVTGRNK 60
           +KIRKA+IPAAGLGTRFLPATKAQPKEMLPIVDKP IQYIVEEA++SGIE I+I+TGRNK
Sbjct: 1   MKIRKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIVEEAIQSGIEDILIITGRNK 60

Query: 61  KSIEDHFDKSVXXXXXXXXXXXXXXXXXVQAISGLAGIHYIRQKEPLGLGHAISCAEQFI 120
           ++IEDHFDKSV                 V+ IS +  IHYIRQKEP GLGHAI CA+ F+
Sbjct: 61  RAIEDHFDKSVELELELKKKNKESLLNLVEDISNMVNIHYIRQKEPKGLGHAIYCAKSFV 120

Query: 121 GG 122
           G 
Sbjct: 121 GN 122


>C4ID98.1 C4ID98_CLOBU UTP-glucose-1-phosphate uridylyltransferase EC=2.7.7.9
          Length = 300

 Score =  175 bits (444), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 92/121 (76%)

Query: 2   KIRKAVIPAAGLGTRFLPATKAQPKEMLPIVDKPAIQYIVEEAVRSGIESIIIVTGRNKK 61
           KIRKA+IPAAGLGTRFLPATKAQPKEMLPIVDKP IQYI+EEAV SGIE I+I+TGRNKK
Sbjct: 5   KIRKAIIPAAGLGTRFLPATKAQPKEMLPIVDKPTIQYIIEEAVASGIEEILIITGRNKK 64

Query: 62  SIEDHFDKSVXXXXXXXXXXXXXXXXXVQAISGLAGIHYIRQKEPLGLGHAISCAEQFIG 121
            IEDHFDKSV                 VQ IS +  IHYIRQKEP GLGHAI CA+ F+G
Sbjct: 65  CIEDHFDKSVELEMELEKNNKNELLELVQDISDMVDIHYIRQKEPRGLGHAIRCAKAFVG 124

Query: 122 G 122
            
Sbjct: 125 N 125


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.320    0.139    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 665,888,354
Number of extensions: 20426676
Number of successful extensions: 56540
Number of sequences better than 1.0e-05: 1846
Number of HSP's gapped: 54979
Number of HSP's successfully gapped: 1846
Length of query: 134
Length of database: 3,060,696,203
Length adjustment: 98
Effective length of query: 36
Effective length of database: 2,137,436,733
Effective search space: 76947722388
Effective search space used: 76947722388
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 126 (53.1 bits)