BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0236.0023.p (181 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2SL74.1 C2SL74_BACCE Putative uncharacterized protein 142 2e-32 C3A6S3.1 C3A6S3_BACMY Putative uncharacterized protein 141 3e-32 C2PWF6.1 C2PWF6_BACCE Putative uncharacterized protein 141 3e-32 B3KCB9.1 B3KCB9_9BACI Putative uncharacterized protein 140 3e-32 C2ZZB9.1 C2ZZB9_BACCE Putative uncharacterized protein 139 1e-31 >C2SL74.1 C2SL74_BACCE Putative uncharacterized protein Length = 178 Score = 142 bits (357), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+K+IKM LK FES+G RV+TYIQSGNVVFES E + + L+ Sbjct: 1 MTIYIALLRGINVGGHKVIKMADLKITFESIGLKRVKTYIQSGNVVFES-EEEISFLKER 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I IK F F+V VM+RT +E I P+E + + ++++FLA S+E ++L Sbjct: 60 IECEIKNVFDFNVPVMLRTNDEFINIIKKCPYETHSLLEGESVHVAFLANPLSEEDSKRL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAMG 178 Y+ + H+ G+ +Y ++ S S L Q K L T T RNW TVNKL A+ Sbjct: 120 LMYKSDIEDCHIEGRVVYLFFKKSIRNSKLMN-QFQK-LHTQATVRNWRTVNKLKAIA 175 >C3A6S3.1 C3A6S3_BACMY Putative uncharacterized protein Length = 178 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+K+IKM LK MFES+G RV+TYIQSGNVVFES E + + L+ Sbjct: 1 MTIYIALLRGINVGGHKVIKMADLKIMFESIGLKRVKTYIQSGNVVFES-EEEISFLKER 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I IK F F+V VM+R +E I P+E + + ++++FLA S+E ++L Sbjct: 60 IECEIKNVFDFNVPVMLRANDEFINIIKKCPYETHSLLEGESVHVAFLANPLSEEDSKRL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAMG 178 Y+ + H+ G+ +Y ++ S S L Q K L T T RNW TVNKL A+ Sbjct: 120 LMYKSDIEDCHIEGRVVYLFFKKSIRNSKLMN-QFQK-LHTPATVRNWRTVNKLKAIA 175 >C2PWF6.1 C2PWF6_BACCE Putative uncharacterized protein Length = 178 Score = 141 bits (355), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 80/178 (44%), Positives = 108/178 (60%), Gaps = 3/178 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+K+IKM LK MFES+G RV+TYIQSGNVVFES E + + L+ Sbjct: 1 MTIYIALLRGINVGGHKVIKMADLKIMFESIGLKRVKTYIQSGNVVFES-EEEISFLKER 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I IK F F+V VM+R +E I P+E + + ++++FLA S+E ++L Sbjct: 60 IECEIKNVFDFNVPVMLRANDEFINIIKKCPYETHSLLEGESVHVAFLANPLSEEDSKRL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAMG 178 Y+ + H+ G+ +Y ++ S S L Q K L T T RNW TVNKL A+ Sbjct: 120 LMYKSDIEDCHIEGRVVYLFFKKSIRNSKLMN-QFQK-LHTPATVRNWRTVNKLKAIA 175 >B3KCB9.1 B3KCB9_9BACI Putative uncharacterized protein Length = 190 Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 76/185 (41%), Positives = 112/185 (60%), Gaps = 9/185 (4%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+ IKM L+ M E +G +RV+TYIQSGNV+FES +++ L+ Sbjct: 1 MTIYIALLRGINVGGHNKIKMADLRKMLEGMGLARVQTYIQSGNVLFESADSKET-LQVQ 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFE------PPAEEGYKRLYISFLAEAPSK 114 + I+E FGF ++V++RT +E+E + PF A ++ LY++ L EAP+ Sbjct: 60 MEQGIQEAFGFQITVILRTSQEIEGIVRHCPFSEETIRAAEAASEFESLYVAMLPEAPTP 119 Query: 115 EALEKLRPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKL 174 + +E+LR Y + G+E+Y L++ S S L Q+ K G +T RNW T+NKL Sbjct: 120 DDVERLRLYVNDKETFEAIGEEIYLLFKESVRNSKL-AAQMAK-FGVPMTMRNWKTMNKL 177 Query: 175 AAMGR 179 + R Sbjct: 178 VELSR 182 >C2ZZB9.1 C2ZZB9_BACCE Putative uncharacterized protein Length = 179 Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 80/180 (44%), Positives = 106/180 (58%), Gaps = 3/180 (1%) Query: 1 MNTYIALLRGINVGGNKIIKMQALKAMFESLGYSRVRTYIQSGNVVFESNEAQAAELEAV 60 M YIALLRGINVGG+K+IKM LK FES+G +V+TYIQSGNVVFES E + L+ Sbjct: 1 MTIYIALLRGINVGGHKVIKMLDLKKAFESIGLKKVKTYIQSGNVVFESEEG-ISFLKER 59 Query: 61 ISAAIKETFGFDVSVMIRTLEELEAAIAGNPFEPPAEEGYKRLYISFLAEAPSKEALEKL 120 I IK F FDV VM+RT +E I P+E + + +Y++FLA S+E ++L Sbjct: 60 IECEIKNVFDFDVPVMLRTNDEFTNIINKCPYEAQSLLAGESVYVAFLANPLSEEDSKQL 119 Query: 121 RPYEEGADKLHVAGKEMYTLYEVSASQSPLFKVQLDKLLGTSITARNWNTVNKLAAMGRE 180 Y+ + H+ G +Y ++ S S L Q K L T T RNW TVNKL + + Sbjct: 120 LMYKSEIEDCHIEGGVVYLFFKKSIRNSKLMN-QFQK-LHTPATVRNWRTVNKLKTIAED 177 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.131 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 947,283,651 Number of extensions: 35190092 Number of successful extensions: 77046 Number of sequences better than 1.0e-05: 271 Number of HSP's gapped: 76694 Number of HSP's successfully gapped: 271 Length of query: 181 Length of database: 3,060,696,203 Length adjustment: 127 Effective length of query: 54 Effective length of database: 1,864,227,298 Effective search space: 100668274092 Effective search space used: 100668274092 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 127 (53.5 bits)