BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0236.0007.p
         (98 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C2ZR93.1 C2ZR93_BACCE Antibiotic biosynthesis monooxygenase           124   3e-27
C2Z9U1.1 C2Z9U1_BACCE Antibiotic biosynthesis monooxygenase           124   3e-27
C2YT88.1 C2YT88_BACCE Antibiotic biosynthesis monooxygenase           124   4e-27
C2UX25.1 C2UX25_BACCE Antibiotic biosynthesis monooxygenase           123   4e-27
Q639S0.1 Q639S0_BACCZ Putative uncharacterized protein ycnE           123   4e-27

>C2ZR93.1 C2ZR93_BACCE Antibiotic biosynthesis monooxygenase
          Length = 97

 Score =  124 bits (310), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 72/94 (76%)

Query: 1  MIIIHAVMQVNPALKEKFLAEAKQLLAATHQEEGNLSYELYNHFEQDNTYIMVETWRDME 60
          MIIIHA+ QV+PA ++ FL E + LL  + +E GN+SY+LY   E+++ Y MVE W+D  
Sbjct: 1  MIIIHAIFQVDPAKQQSFLEEIQPLLHGSREESGNVSYDLYKDTEKESVYTMVEVWKDEA 60

Query: 61 AVASHNTSSHFTGFAAKAPEFLTAPLDVKVYNAE 94
          AVASHNTS HFT F +KAP+FLTAPLD+KVY+ E
Sbjct: 61 AVASHNTSEHFTSFVSKAPQFLTAPLDIKVYSGE 94


>C2Z9U1.1 C2Z9U1_BACCE Antibiotic biosynthesis monooxygenase
          Length = 97

 Score =  124 bits (310), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 72/94 (76%)

Query: 1  MIIIHAVMQVNPALKEKFLAEAKQLLAATHQEEGNLSYELYNHFEQDNTYIMVETWRDME 60
          MIIIHA+ QV+PA ++ FL E + LL  + +E GN+SY+LY   E+++ Y MVE W+D  
Sbjct: 1  MIIIHAIFQVDPAKQQSFLEEIQPLLHGSREESGNVSYDLYKDTEKESVYTMVEVWKDEA 60

Query: 61 AVASHNTSSHFTGFAAKAPEFLTAPLDVKVYNAE 94
          AVASHNTS HFT F +KAP+FLTAPLD+KVY+ E
Sbjct: 61 AVASHNTSEHFTSFVSKAPQFLTAPLDIKVYSGE 94


>C2YT88.1 C2YT88_BACCE Antibiotic biosynthesis monooxygenase
          Length = 97

 Score =  124 bits (310), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 71/94 (75%)

Query: 1  MIIIHAVMQVNPALKEKFLAEAKQLLAATHQEEGNLSYELYNHFEQDNTYIMVETWRDME 60
          MIIIHA+ QV+PA ++ FL E + L+ ++ +E GN+SY+LY   E++N Y MVE W+D E
Sbjct: 1  MIIIHAIFQVDPAKQQSFLEEIRPLIHSSREESGNVSYDLYKDTEKENVYTMVEVWKDAE 60

Query: 61 AVASHNTSSHFTGFAAKAPEFLTAPLDVKVYNAE 94
          AVASHNTS HFT F +K  +FLTAPLD+K YN E
Sbjct: 61 AVASHNTSEHFTSFVSKVKQFLTAPLDIKAYNGE 94


>C2UX25.1 C2UX25_BACCE Antibiotic biosynthesis monooxygenase
          Length = 97

 Score =  123 bits (309), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 55/94 (58%), Positives = 71/94 (75%)

Query: 1  MIIIHAVMQVNPALKEKFLAEAKQLLAATHQEEGNLSYELYNHFEQDNTYIMVETWRDME 60
          MIIIHA+ QV+PA ++ FL E + L+  + +E GN+SY+LY   E++N Y MVE W+D E
Sbjct: 1  MIIIHAIFQVDPAKQQSFLEEIQPLIHGSREESGNVSYDLYKDTEKENVYTMVEVWKDEE 60

Query: 61 AVASHNTSSHFTGFAAKAPEFLTAPLDVKVYNAE 94
          AVASHNTS HFT F +KA +FLTAPLD+K YN E
Sbjct: 61 AVASHNTSEHFTSFVSKAAQFLTAPLDIKAYNGE 94


>Q639S0.1 Q639S0_BACCZ Putative uncharacterized protein ycnE
          Length = 97

 Score =  123 bits (309), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 54/94 (57%), Positives = 73/94 (77%)

Query: 1  MIIIHAVMQVNPALKEKFLAEAKQLLAATHQEEGNLSYELYNHFEQDNTYIMVETWRDME 60
          MIIIHA+ QV+PA ++ FL E + L+ ++ +E GN+SY+LY   E++N Y+MVE W+D E
Sbjct: 1  MIIIHAIFQVDPAKQQSFLEEIQPLIHSSREESGNVSYDLYKDTEKENVYMMVEVWKDEE 60

Query: 61 AVASHNTSSHFTGFAAKAPEFLTAPLDVKVYNAE 94
          AVASHNTS HFT F +KA ++LTAPLD+K YN E
Sbjct: 61 AVASHNTSEHFTSFVSKAKQYLTAPLDIKAYNGE 94


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.127    0.361 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 564,728,173
Number of extensions: 18897867
Number of successful extensions: 49741
Number of sequences better than 1.0e-05: 177
Number of HSP's gapped: 49776
Number of HSP's successfully gapped: 177
Length of query: 98
Length of database: 3,060,696,203
Length adjustment: 67
Effective length of query: 31
Effective length of database: 2,429,488,198
Effective search space: 75314134138
Effective search space used: 75314134138
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 125 (52.8 bits)